Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:30 (472843): wrapper (7.7.26015): starting
03:01:30 (472843): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 03:01:30] Arguments: --nthreads 4
[2025-10-13 03:01:30] Threads: 4
[2025-10-13 03:01:30] Checking for CVMFS
[2025-10-13 03:01:30] No cvmfs_config command found, will try listing directly
[2025-10-13 03:01:30] CVMFS is ok
[2025-10-13 03:01:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:01:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:01:30] Further information can be found at the LHC@home message board.
[2025-10-13 03:01:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:01:30] Checking for apptainer binary...
[2025-10-13 03:01:30] which: no apptainer in ((null))
[2025-10-13 03:01:30] apptainer is not installed, using version from CVMFS
[2025-10-13 03:01:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:01:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-10-13 03:01:30] apptainer works
[2025-10-13 03:01:30] Set ATHENA_PROC_NUMBER=4
[2025-10-13 03:01:30] Set ATHENA_CORE_NUMBER=4
[2025-10-13 03:01:30] Starting ATLAS job with PandaID=6838602923
[2025-10-13 03:01:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:35:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:35:44] 2025-10-13 03:34:07,487 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:35:44] 2025-10-13 03:34:07,487 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 05:35:44] 2025-10-13 03:34:07,488 | INFO     | sum of deviations: 11319568639.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,488 | INFO     | mean x: 1760321881.5
[2025-10-13 05:35:44] 2025-10-13 03:34:07,488 | INFO     | mean y: 2298603.32
[2025-10-13 05:35:44] 2025-10-13 03:34:07,489 | INFO     | -- intersect: -19038671274.535362
[2025-10-13 05:35:44] 2025-10-13 03:34:07,489 | INFO     | intersect: -19038671274.535362
[2025-10-13 05:35:44] 2025-10-13 03:34:07,489 | INFO     | chi2: 1.9716643610668907
[2025-10-13 05:35:44] 2025-10-13 03:34:07,490 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,490 | INFO     | sum of deviations: 19282372609.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | mean x: 1760321729.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | mean y: 2310255.0551724136
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | -- intersect: -35905650890.51806
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | intersect: -35905650890.51806
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | chi2: 1.3132880179609934
[2025-10-13 05:35:44] 2025-10-13 03:34:07,491 | INFO     | current chi2=1.3132880179609934 (change=33.39190767487638 %)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,492 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,492 | INFO     | sum of deviations: 18565179810.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,492 | INFO     | mean x: 1760321576.5
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | mean y: 2309096.7
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | -- intersect: -38408265106.513054
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | intersect: -38408265106.513054
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | chi2: 1.3144159628809022
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | current chi2=1.3144159628809022 (change=-0.08588709441361589 %)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,493 | INFO     | right removable region: 139
[2025-10-13 05:35:44] 2025-10-13 03:34:07,494 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,494 | INFO     | sum of deviations: -6692864490.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,494 | INFO     | mean x: 1760322034.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | mean y: 2325236.8896551724
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | -- intersect: 12465893106.505457
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | intersect: 12465893106.505457
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | chi2: 0.6821889304550931
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | current chi2=0.6821889304550931 (change=65.40035190949271 %)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,495 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,496 | INFO     | sum of deviations: -6098731901.5
[2025-10-13 05:35:44] 2025-10-13 03:34:07,496 | INFO     | mean x: 1760322186.5
[2025-10-13 05:35:44] 2025-10-13 03:34:07,496 | INFO     | mean y: 2324269.2785714287
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | -- intersect: 12620347785.43029
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | intersect: 12620347785.43029
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | chi2: 0.6821793444879785
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | current chi2=0.6821793444879785 (change=0.0014051777574652083 %)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | left removable region: 20
[2025-10-13 05:35:44] 2025-10-13 03:34:07,497 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,498 | INFO     | sum of deviations: 1807331362.9999998
[2025-10-13 05:35:44] 2025-10-13 03:34:07,498 | INFO     | mean x: 1760322156.0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,498 | INFO     | mean y: 2337531.87394958
[2025-10-13 05:35:44] 2025-10-13 03:34:07,498 | INFO     | -- intersect: -6086596957.556324
[2025-10-13 05:35:44] 2025-10-13 03:34:07,498 | INFO     | intersect: -6086596957.556324
[2025-10-13 05:35:44] 2025-10-13 03:34:07,499 | INFO     | chi2: 0.00048612154975062274
[2025-10-13 05:35:44] 2025-10-13 03:34:07,499 | INFO     | -- intersect: -6086596957.556324
[2025-10-13 05:35:44] 2025-10-13 03:34:07,499 | INFO     | current memory leak: 3.46 B/s (using 119 data points, chi2=0.00)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,499 | INFO     | could have reported an average CPU frequency of 2721 MHz (9 samples)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | ..............................
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . Timing measurements:
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . get job = 0 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . initial setup = 1 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . payload setup = 8 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . stage-in = 0 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . payload execution = 9106 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . stage-out = 0 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,500 | INFO     | . log creation = 0 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,501 | INFO     | ..............................
[2025-10-13 05:35:44] 2025-10-13 03:34:07,604 | INFO     | 
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | job summary report
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | --------------------------------------------------
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | PanDA job id: 6838602923
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | task id: 46676269
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | errors: (none)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | pilot state: finished 
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | transexitcode: 0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | exeerrorcode: 0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | exeerrordiag: 
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | exitcode: 0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | exitmsg: OK
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | cpuconsumptiontime: 35065 s
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | nevents: 400
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | neventsw: 0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,606 | INFO     | pid: 496140
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | pgrp: 496140
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | corecount: 4
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | event service: False
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | sizes: {0: 2348869, 6: 2349131, 11: 2349159, 9118: 2377770, 9119: 2386792, 9120: 2386848, 9126: 2387234}
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | --------------------------------------------------
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | 
[2025-10-13 05:35:44] 2025-10-13 03:34:07,607 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-10-13 05:35:44] 2025-10-13 03:34:07,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:35:44] 2025-10-13 03:34:07,640 | INFO     | job 6838602923 has completed (purged errors)
[2025-10-13 05:35:44] 2025-10-13 03:34:07,640 | INFO     | overall cleanup function is called
[2025-10-13 05:35:44] 2025-10-13 03:34:08,154 | INFO     | PID=478874 has CPU usage=22.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:35:44] 2025-10-13 03:34:08,154 | INFO     | .. there are 6 such processes running
[2025-10-13 05:35:44] 2025-10-13 03:34:08,651 | INFO     | --- collectZombieJob: --- 10, [496140]
[2025-10-13 05:35:44] 2025-10-13 03:34:08,651 | INFO     | zombie collector waiting for pid 496140
[2025-10-13 05:35:44] 2025-10-13 03:34:08,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:35:44] 2025-10-13 03:34:08,651 | INFO     | collected zombie processes
[2025-10-13 05:35:44] 2025-10-13 03:34:08,651 | INFO     | will attempt to kill all subprocesses of pid=496140
[2025-10-13 05:35:44] 2025-10-13 03:34:09,354 | INFO     | process IDs to be killed: [496140] (in reverse order)
[2025-10-13 05:35:44] 2025-10-13 03:34:09,561 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:35:44] 2025-10-13 03:34:09,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:35:44] 2025-10-13 03:34:09,592 | INFO     | did not find any defunct processes belonging to 496140
[2025-10-13 05:35:44] 2025-10-13 03:34:09,617 | INFO     | did not find any defunct processes belonging to 496140
[2025-10-13 05:35:44] 2025-10-13 03:34:09,617 | INFO     | ready for new job
[2025-10-13 05:35:44] 2025-10-13 03:34:09,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:35:44] 2025-10-13 03:34:09,620 | INFO     | ***************************************
[2025-10-13 05:35:44] 2025-10-13 03:34:09,620 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:35:44] 2025-10-13 03:34:09,620 | INFO     | ***************************************
[2025-10-13 05:35:44] 2025-10-13 03:34:09,620 | INFO     | 
[2025-10-13 05:35:44] 2025-10-13 03:34:09,628 | INFO     | architecture information:
[2025-10-13 05:35:44] 2025-10-13 03:34:09,628 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:35:44] 2025-10-13 03:34:09,651 | INFO     | cat /etc/os-release:
[2025-10-13 05:35:44] NAME="CentOS Linux"
[2025-10-13 05:35:44] VERSION="7 (Core)"
[2025-10-13 05:35:44] ID="centos"
[2025-10-13 05:35:44] ID_LIKE="rhel fedora"
[2025-10-13 05:35:44] VERSION_ID="7"
[2025-10-13 05:35:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:35:44] ANSI_COLOR="0;31"
[2025-10-13 05:35:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:35:44] HOME_URL="https://www.centos.org/"
[2025-10-13 05:35:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:35:44] 
[2025-10-13 05:35:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:35:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:35:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:35:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:35:44] 
[2025-10-13 05:35:44] 2025-10-13 03:34:09,651 | INFO     | ***************************************
[2025-10-13 05:35:44] 2025-10-13 03:34:10,154 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-10-13 05:35:44] 2025-10-13 03:34:10,178 | INFO     | sufficient remaining disk space (3334489505792 B)
[2025-10-13 05:35:44] 2025-10-13 03:34:10,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:35:44] 2025-10-13 03:34:10,179 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:35:44] 2025-10-13 03:34:10,179 | INFO     | update_server=False
[2025-10-13 05:35:44] 2025-10-13 03:34:10,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:35:44] 2025-10-13 03:34:10,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:35:44] 2025-10-13 03:34:10,392 | INFO     | all job control threads have been joined
[2025-10-13 05:35:44] 2025-10-13 03:34:10,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:44] 2025-10-13 03:34:10,552 | INFO     | aborting loop
[2025-10-13 05:35:44] 2025-10-13 03:34:10,567 | INFO     | all payload control threads have been joined
[2025-10-13 05:35:44] 2025-10-13 03:34:10,687 | INFO     | all data control threads have been joined
[2025-10-13 05:35:44] 2025-10-13 03:34:11,184 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,398 | INFO     | [job] control thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,461 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,480 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,558 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,571 | INFO     | [payload] control thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,647 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,693 | INFO     | [data] control thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:11,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:35:44] 2025-10-13 03:34:12,045 | INFO     | [job] validate thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:12,185 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:12,386 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:12,541 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:12,568 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:12,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:44] 2025-10-13 03:34:13,616 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:15,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:20,442 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:35:44] 2025-10-13 03:34:21,448 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:35:44] 2025-10-13 03:34:41,152 | INFO     | PID=478874 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:35:44] 2025-10-13 03:34:41,152 | INFO     | .. there are 6 such processes running
[2025-10-13 05:35:44] 2025-10-13 03:34:41,152 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:35:44] 2025-10-13 03:34:41,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:35:44] 2025-10-13 03:34:41,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:35:44] 2025-10-13 03:34:58,273 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:35:44] 2025-10-13 03:34:59,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22956802185024)>', '<ExcThread(monitor, started 22956566615808)>']
[2025-10-13 05:35:44] 2025-10-13 03:34:59,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:35:44] 2025-10-13 03:34:59,218 | INFO     | [monitor] control thread has ended
[2025-10-13 05:35:44] 2025-10-13 03:35:04,129 | INFO     | all workflow threads have been joined
[2025-10-13 05:35:44] 2025-10-13 03:35:04,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:35:44] 2025-10-13 03:35:04,130 | INFO     | traces error code: 0
[2025-10-13 05:35:44] 2025-10-13 03:35:04,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:35:44] 2025-10-13 03:35:04,266 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:35:44] 2025-10-13 03:35:04,271 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:35:44] 2025-10-13 03:35:04,274 [wrapper] pilotpid: 478874
[2025-10-13 05:35:44] 2025-10-13 03:35:04,278 [wrapper] Pilot exit status: 0
[2025-10-13 05:35:44] 2025-10-13 03:35:04,291 [wrapper] pandaids: 6838602923
[2025-10-13 05:35:44] 2025-10-13 03:35:04,453 [wrapper] cleanup supervisor_pilot  786798 478875
[2025-10-13 05:35:44] 2025-10-13 03:35:04,457 [wrapper] Test setup, not cleaning
[2025-10-13 05:35:44] 2025-10-13 03:35:04,461 [wrapper] apfmon messages muted
[2025-10-13 05:35:44] 2025-10-13 03:35:04,465 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:35:44] 2025-10-13 03:35:04,469 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:35:44]  *** Error codes and diagnostics ***
[2025-10-13 05:35:44]     "exeErrorCode": 0,
[2025-10-13 05:35:44]     "exeErrorDiag": "",
[2025-10-13 05:35:44]     "pilotErrorCode": 0,
[2025-10-13 05:35:44]     "pilotErrorDiag": "",
[2025-10-13 05:35:44]  *** Listing of results directory ***
[2025-10-13 05:35:44] total 411248
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:01 pilot3.tar.gz
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:00 queuedata.json
[2025-10-13 05:35:44] -rwx------ 1 boinc boinc     36292 Oct 11 17:01 runpilot2-wrapper.sh
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:35:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:01 run_atlas
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:01 job.xml
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc      6688 Oct 13 03:01 init_data.xml
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc 219484956 Oct 13 03:01 EVNT.46676267._002362.pool.root.1
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:01 start_atlas.sh
[2025-10-13 05:35:44] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:01 shared
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc    569684 Oct 13 03:01 input.tar.gz
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:01 boinc_lockfile
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:01 pandaJob.out
[2025-10-13 05:35:44] -rw------- 1 boinc boinc    975603 Oct 13 03:01 agis_schedconf.cvmfs.json
[2025-10-13 05:35:44] -rw------- 1 boinc boinc   1560580 Oct 13 03:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:35:44] drwx------ 5 boinc boinc      4096 Oct 13 03:01 pilot3
[2025-10-13 05:35:44] -rw------- 1 boinc boinc 194504189 Oct 13 05:33 HITS.46676269._059780.pool.root.1
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:33 boinc_task_state.xml
[2025-10-13 05:35:44] -rw------- 1 boinc boinc      1049 Oct 13 05:33 memory_monitor_summary.json
[2025-10-13 05:35:44] -rw------- 1 boinc boinc        95 Oct 13 05:33 pilot_heartbeat.json
[2025-10-13 05:35:44] -rw------- 1 boinc boinc    322936 Oct 13 05:34 log.46676269._059780.job.log.tgz.1
[2025-10-13 05:35:44] -rw------- 1 boinc boinc      7779 Oct 13 05:34 heartbeat.json
[2025-10-13 05:35:44] -rw------- 1 boinc boinc      4906 Oct 13 05:35 pilotlog.txt
[2025-10-13 05:35:44] -rw------- 1 boinc boinc   1288611 Oct 13 05:35 log.46676269._059780.job.log.1
[2025-10-13 05:35:44] -rw------- 1 boinc boinc       357 Oct 13 05:35 output.list
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:35 runtime_log
[2025-10-13 05:35:44] -rw------- 1 boinc boinc   1628160 Oct 13 05:35 result.tar.gz
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc      9084 Oct 13 05:35 runtime_log.err
[2025-10-13 05:35:44] -rw------- 1 boinc boinc       662 Oct 13 05:35 dGgNDmvGqR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhkgNDm5vRv8n.diag
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc        26 Oct 13 05:35 wrapper_checkpoint.txt
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:35 boinc_mmap_file
[2025-10-13 05:35:44] -rw-r--r-- 1 boinc boinc     20743 Oct 13 05:35 stderr.txt
[2025-10-13 05:35:44] HITS file was successfully produced:
[2025-10-13 05:35:44] -rw------- 1 boinc boinc 194504189 Oct 13 05:33 shared/HITS.pool.root.1
[2025-10-13 05:35:44]  *** Contents of shared directory: ***
[2025-10-13 05:35:44] total 406468
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc 219484956 Oct 13 03:01 ATLAS.root_0
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:01 start_atlas.sh
[2025-10-13 05:35:44] -rw-r--r-- 2 boinc boinc    569684 Oct 13 03:01 input.tar.gz
[2025-10-13 05:35:44] -rw------- 1 boinc boinc 194504189 Oct 13 05:33 HITS.pool.root.1
[2025-10-13 05:35:44] -rw------- 1 boinc boinc   1628160 Oct 13 05:35 result.tar.gz
05:35:45 (472843): run_atlas exited; CPU time 35659.813074
05:35:45 (472843): called boinc_finish(0)

</stderr_txt>
]]>

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