Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:41:15 (3061367): wrapper (7.7.26015): starting
05:41:15 (3061367): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:41:15] Arguments: --nthreads 12
[2025-10-13 05:41:15] Threads: 12
[2025-10-13 05:41:15] Checking for CVMFS
[2025-10-13 05:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:41:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:41:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:41:16] 2.13.2.0 13441 13875 59172 151631 2 56 5765402 6144000 0 130560 0 12240756 99.992 427239 60 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 05:41:16] CVMFS is ok
[2025-10-13 05:41:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:41:16] Checking for apptainer binary...
[2025-10-13 05:41:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:41:16] Running /usr/bin/apptainer --version
[2025-10-13 05:41:16] apptainer version 1.4.3
[2025-10-13 05:41:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:41:16] MINIPC-PN51-E1
[2025-10-13 05:41:16] apptainer works
[2025-10-13 05:41:16] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:41:16] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:41:16] Starting ATLAS job with PandaID=6838366432
[2025-10-13 05:41:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:54:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:54:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8a/log.46676269._057315.job.log.tgz.1
[2025-10-13 06:54:42]  workdir=None
[2025-10-13 06:54:42] ]
[2025-10-13 06:54:42] 2025-10-12 19:53:38,643 | INFO     | transferring file log.46676269._057315.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838366432/log.46676269._057315.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 06:54:42] 2025-10-12 19:53:38,643 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838366432/log.46676269._057315.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._057315.job
[2025-10-13 06:54:42] 2025-10-12 19:53:38,658 | INFO     | adding to output.list: log.46676269._057315.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8a/log.46676269._057315.job.log.tg
[2025-10-13 06:54:42] 2025-10-12 19:53:38,659 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:54:42] 2025-10-12 19:53:38,659 | INFO     | summary of transferred files:
[2025-10-13 06:54:42] 2025-10-12 19:53:38,659 | INFO     |  -- lfn=log.46676269._057315.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:54:42] 2025-10-12 19:53:38,659 | INFO     | stage-out finished correctly
[2025-10-13 06:54:42] 2025-10-12 19:53:39,919 | INFO     | time since job start (4330s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:40,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:54:42] 2025-10-12 19:53:41,916 | WARNING  | process 3072304 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:54:42] 2025-10-12 19:53:41,916 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838366432/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:54:42] 2025-10-12 19:53:41,925 | INFO     | time since job start (4332s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:41,977 | INFO     | number of running child processes to parent process 3072304: 1
[2025-10-13 06:54:42] 2025-10-12 19:53:41,977 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | job 6838366432 has state=finished
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | preparing for final server update for job 6838366432 in state='finished'
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:54:42] 2025-10-12 19:53:42,517 | INFO     | job 6838366432 has finished - writing final server update
[2025-10-13 06:54:42] 2025-10-12 19:53:42,518 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:54:42] 2025-10-12 19:53:42,522 | INFO     | executing command: lscpu
[2025-10-13 06:54:42] 2025-10-12 19:53:42,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:54:42] 2025-10-12 19:53:43,931 | INFO     | time since job start (4334s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:44,479 | INFO     | monitor loop #323: job 0:6838366432 is in state 'finished'
[2025-10-13 06:54:42] 2025-10-12 19:53:44,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:54:42] 2025-10-12 19:53:45,937 | INFO     | time since job start (4336s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:46,983 | INFO     | monitor loop #324: job 0:6838366432 is in state 'finished'
[2025-10-13 06:54:42] 2025-10-12 19:53:46,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:54:42] 2025-10-12 19:53:47,943 | INFO     | time since job start (4338s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:49,486 | INFO     | monitor loop #325: job 0:6838366432 is in state 'finished'
[2025-10-13 06:54:42] 2025-10-12 19:53:49,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:54:42] 2025-10-12 19:53:49,949 | INFO     | time since job start (4340s) is within the limit (172800.0s)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,456 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:54:42] 2025-10-12 19:53:51,458 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2702.1221874999997
[2025-10-13 06:54:42] 2025-10-12 19:53:51,460 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838366432/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,461 | INFO     | extracted standard info from prmon json
[2025-10-13 06:54:42] 2025-10-12 19:53:51,461 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:54:42] 2025-10-12 19:53:51,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:54:42] 2025-10-12 19:53:51,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:54:42] 2025-10-12 19:53:51,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:54:42] 2025-10-12 19:53:51,462 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:54:42] 2025-10-12 19:53:51,462 | INFO     | sum of square deviations: 81268165.984375
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | sum of deviations: -9232172270.71875
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | mean x: 1760296739.515625
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | mean y: 2831510.71875
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | -- intersect: 199974893756.0676
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | intersect: 199974893756.0676
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | chi2: 0.11958816618893628
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | -- intersect: 199974893756.0676
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | current memory leak: -113.60 B/s (using 64 data points, chi2=0.12)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | could have reported an average CPU frequency of 2688 MHz (6 samples)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | ..............................
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | . Timing measurements:
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | . get job = 0 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,463 | INFO     | . initial setup = 5 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | . payload setup = 4 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | . stage-in = 0 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | . payload execution = 4304 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | . stage-out = 0 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | . log creation = 0 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,464 | INFO     | ..............................
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | 
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | job summary report
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | --------------------------------------------------
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | PanDA job id: 6838366432
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | task id: 46676269
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | errors: (none)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | pilot state: finished 
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | transexitcode: 0
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | exeerrorcode: 0
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | exeerrordiag: 
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | exitcode: 0
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | exitmsg: OK
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | cpuconsumptiontime: 45800 s
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | nevents: 400
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | neventsw: 0
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | pid: 3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | pgrp: 3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | corecount: 12
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | event service: False
[2025-10-13 06:54:42] 2025-10-12 19:53:51,520 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 4313: 2375309, 4315: 2384307, 4316: 2384363, 4328: 2384685}
[2025-10-13 06:54:42] 2025-10-12 19:53:51,521 | INFO     | --------------------------------------------------
[2025-10-13 06:54:42] 2025-10-12 19:53:51,521 | INFO     | 
[2025-10-13 06:54:42] 2025-10-12 19:53:51,521 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | job 6838366432 has completed (purged errors)
[2025-10-13 06:54:42] 2025-10-12 19:53:51,542 | INFO     | overall cleanup function is called
[2025-10-13 06:54:42] 2025-10-12 19:53:52,549 | INFO     | --- collectZombieJob: --- 10, [3072304]
[2025-10-13 06:54:42] 2025-10-12 19:53:52,549 | INFO     | zombie collector waiting for pid 3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:52,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:54:42] 2025-10-12 19:53:52,550 | INFO     | collected zombie processes
[2025-10-13 06:54:42] 2025-10-12 19:53:52,550 | INFO     | will attempt to kill all subprocesses of pid=3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:52,627 | INFO     | process IDs to be killed: [3072304] (in reverse order)
[2025-10-13 06:54:42] 2025-10-12 19:53:52,678 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:54:42] 2025-10-12 19:53:52,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:54:42] 2025-10-12 19:53:52,682 | INFO     | did not find any defunct processes belonging to 3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:52,686 | INFO     | did not find any defunct processes belonging to 3072304
[2025-10-13 06:54:42] 2025-10-12 19:53:52,686 | INFO     | ready for new job
[2025-10-13 06:54:42] 2025-10-12 19:53:52,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:54:42] 2025-10-12 19:53:52,688 | INFO     | ***************************************
[2025-10-13 06:54:42] 2025-10-12 19:53:52,688 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:54:42] 2025-10-12 19:53:52,688 | INFO     | ***************************************
[2025-10-13 06:54:42] 2025-10-12 19:53:52,688 | INFO     | 
[2025-10-13 06:54:42] 2025-10-12 19:53:52,689 | INFO     | architecture information:
[2025-10-13 06:54:42] 2025-10-12 19:53:52,689 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:54:42] 2025-10-12 19:53:52,704 | INFO     | cat /etc/os-release:
[2025-10-13 06:54:42] NAME="CentOS Linux"
[2025-10-13 06:54:42] VERSION="7 (Core)"
[2025-10-13 06:54:42] ID="centos"
[2025-10-13 06:54:42] ID_LIKE="rhel fedora"
[2025-10-13 06:54:42] VERSION_ID="7"
[2025-10-13 06:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:54:42] ANSI_COLOR="0;31"
[2025-10-13 06:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:54:42] HOME_URL="https://www.centos.org/"
[2025-10-13 06:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:54:42] 
[2025-10-13 06:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:54:42] 
[2025-10-13 06:54:42] 2025-10-12 19:53:52,704 | INFO     | ***************************************
[2025-10-13 06:54:42] 2025-10-12 19:53:53,208 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 06:54:42] 2025-10-12 19:53:53,223 | INFO     | sufficient remaining disk space (406897819648 B)
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | INFO     | update_server=False
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | INFO     | aborting loop
[2025-10-13 06:54:42] 2025-10-12 19:53:53,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:54:42] 2025-10-12 19:53:53,817 | INFO     | all job control threads have been joined
[2025-10-13 06:54:42] 2025-10-12 19:53:53,900 | INFO     | all payload control threads have been joined
[2025-10-13 06:54:42] 2025-10-12 19:53:53,952 | INFO     | all data control threads have been joined
[2025-10-13 06:54:42] 2025-10-12 19:53:54,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:54:42] 2025-10-12 19:53:54,229 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,229 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,230 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,822 | INFO     | [job] control thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,868 | INFO     | [job] validate thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,905 | INFO     | [payload] control thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:54,957 | INFO     | [data] control thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:55,026 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:55,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:54:42] 2025-10-12 19:53:55,213 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:55,240 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:55,494 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:55,529 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:56,223 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:53:59,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:54:04,069 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:54:42] 2025-10-12 19:54:05,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:54:42] 2025-10-12 19:54:23,136 | INFO     | PID=3065217 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:54:42] 2025-10-12 19:54:23,136 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:54:42] 2025-10-12 19:54:23,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:54:42] 2025-10-12 19:54:23,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:54:42] 2025-10-12 19:54:35,783 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:54:42] 2025-10-12 19:54:36,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136097390626624)>', '<ExcThread(monitor, started 136096725833472)>']
[2025-10-13 06:54:42] 2025-10-12 19:54:37,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:54:42] 2025-10-12 19:54:37,199 | INFO     | [monitor] control thread has ended
[2025-10-13 06:54:42] 2025-10-12 19:54:41,813 | INFO     | all workflow threads have been joined
[2025-10-13 06:54:42] 2025-10-12 19:54:41,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:54:42] 2025-10-12 19:54:41,813 | INFO     | traces error code: 0
[2025-10-13 06:54:42] 2025-10-12 19:54:41,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:54:42] 2025-10-12 19:54:41,979 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:54:42] 2025-10-12 19:54:41,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:54:42] 2025-10-12 19:54:41,988 [wrapper] pilotpid: 3065217
[2025-10-13 06:54:42] 2025-10-12 19:54:41,993 [wrapper] Pilot exit status: 0
[2025-10-13 06:54:42] 2025-10-12 19:54:42,007 [wrapper] pandaids: 6838366432
[2025-10-13 06:54:42] 2025-10-12 19:54:42,041 [wrapper] cleanup supervisor_pilot 3129895 3065218
[2025-10-13 06:54:42] 2025-10-12 19:54:42,046 [wrapper] Test setup, not cleaning
[2025-10-13 06:54:42] 2025-10-12 19:54:42,050 [wrapper] apfmon messages muted
[2025-10-13 06:54:42] 2025-10-12 19:54:42,054 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:54:42] 2025-10-12 19:54:42,058 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:54:42]  *** Error codes and diagnostics ***
[2025-10-13 06:54:42]     "exeErrorCode": 0,
[2025-10-13 06:54:42]     "exeErrorDiag": "",
[2025-10-13 06:54:42]     "pilotErrorCode": 0,
[2025-10-13 06:54:42]     "pilotErrorDiag": "",
[2025-10-13 06:54:42]  *** Listing of results directory ***
[2025-10-13 06:54:42] total 411428
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:21 pilot3.tar.gz
[2025-10-13 06:54:42] -rwx------ 1 boinc boinc     36292 Oct 11 22:59 runpilot2-wrapper.sh
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:59 queuedata.json
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:54:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:41 run_atlas
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:41 job.xml
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc 220302360 Oct 13 05:41 EVNT.46676267._002301.pool.root.1
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:41 input.tar.gz
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:41 start_atlas.sh
[2025-10-13 06:54:42] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:41 shared
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:41 boinc_setup_complete
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc      9348 Oct 13 05:41 init_data.xml
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:41 boinc_lockfile
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:41 pandaJob.out
[2025-10-13 06:54:42] -rw------- 1 boinc boinc    975528 Oct 13 05:41 agis_schedconf.cvmfs.json
[2025-10-13 06:54:42] -rw------- 1 boinc boinc   1560580 Oct 13 05:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:54:42] drwx------ 5 boinc boinc      4096 Oct 13 05:41 pilot3
[2025-10-13 06:54:42] -rw------- 1 boinc boinc 195074822 Oct 13 06:53 HITS.46676269._057315.pool.root.1
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc       529 Oct 13 06:53 boinc_task_state.xml
[2025-10-13 06:54:42] -rw------- 1 boinc boinc      1019 Oct 13 06:53 memory_monitor_summary.json
[2025-10-13 06:54:42] -rw------- 1 boinc boinc    377547 Oct 13 06:53 log.46676269._057315.job.log.tgz.1
[2025-10-13 06:54:42] -rw------- 1 boinc boinc        95 Oct 13 06:53 pilot_heartbeat.json
[2025-10-13 06:54:42] -rw------- 1 boinc boinc      7782 Oct 13 06:53 heartbeat.json
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:54 boinc_mmap_file
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:54 wrapper_checkpoint.txt
[2025-10-13 06:54:42] -rw------- 1 boinc boinc      4821 Oct 13 06:54 pilotlog.txt
[2025-10-13 06:54:42] -rw------- 1 boinc boinc    631904 Oct 13 06:54 log.46676269._057315.job.log.1
[2025-10-13 06:54:42] -rw------- 1 boinc boinc       357 Oct 13 06:54 output.list
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:54 runtime_log
[2025-10-13 06:54:42] -rw------- 1 boinc boinc   1024000 Oct 13 06:54 result.tar.gz
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc      8703 Oct 13 06:54 runtime_log.err
[2025-10-13 06:54:42] -rw------- 1 boinc boinc       650 Oct 13 06:54 FwaMDmwQnR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3NgNDmmt9lGn.diag
[2025-10-13 06:54:42] -rw-r--r-- 1 boinc boinc     21998 Oct 13 06:54 stderr.txt
[2025-10-13 06:54:42] HITS file was successfully produced:
[2025-10-13 06:54:42] -rw------- 1 boinc boinc 195074822 Oct 13 06:53 shared/HITS.pool.root.1
[2025-10-13 06:54:42]  *** Contents of shared directory: ***
[2025-10-13 06:54:42] total 407228
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc 220302360 Oct 13 05:41 ATLAS.root_0
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc    569680 Oct 13 05:41 input.tar.gz
[2025-10-13 06:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:41 start_atlas.sh
[2025-10-13 06:54:42] -rw------- 1 boinc boinc 195074822 Oct 13 06:53 HITS.pool.root.1
[2025-10-13 06:54:42] -rw------- 1 boinc boinc   1024000 Oct 13 06:54 result.tar.gz
06:54:43 (3061367): run_atlas exited; CPU time 45762.996239
06:54:43 (3061367): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN