Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:54:46 (3146096): wrapper (7.7.26015): starting
06:54:46 (3146096): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:54:46] Arguments: --nthreads 12
[2025-10-13 06:54:46] Threads: 12
[2025-10-13 06:54:46] Checking for CVMFS
[2025-10-13 06:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:54:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:54:47] 2.13.2.0 13441 13948 59512 151635 1 57 5771439 6144000 0 130560 0 12305867 99.992 429834 60 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 06:54:47] CVMFS is ok
[2025-10-13 06:54:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:54:47] Checking for apptainer binary...
[2025-10-13 06:54:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:54:47] Running /usr/bin/apptainer --version
[2025-10-13 06:54:47] apptainer version 1.4.3
[2025-10-13 06:54:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:54:47] MINIPC-PN51-E1
[2025-10-13 06:54:47] apptainer works
[2025-10-13 06:54:47] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:54:47] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:54:47] Starting ATLAS job with PandaID=6838366482
[2025-10-13 06:54:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:09:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:09:14]  workdir=None
[2025-10-13 08:09:14] ]
[2025-10-13 08:09:14] 2025-10-12 21:08:35,966 | INFO     | transferring file log.46676269._057365.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838366482/log.46676269._057365.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 08:09:14] 2025-10-12 21:08:35,966 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838366482/log.46676269._057365.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._057365.job
[2025-10-13 08:09:14] 2025-10-12 21:08:35,982 | INFO     | adding to output.list: log.46676269._057365.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/24/log.46676269._057365.job.log.tg
[2025-10-13 08:09:14] 2025-10-12 21:08:35,983 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:09:14] 2025-10-12 21:08:35,983 | INFO     | summary of transferred files:
[2025-10-13 08:09:14] 2025-10-12 21:08:35,983 | INFO     |  -- lfn=log.46676269._057365.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:09:14] 2025-10-12 21:08:35,983 | INFO     | stage-out finished correctly
[2025-10-13 08:09:14] 2025-10-12 21:08:36,830 | INFO     | monitor loop #330: job 0:6838366482 is in state 'finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:36,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:09:14] 2025-10-12 21:08:37,306 | INFO     | time since job start (4416s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:37,469 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:09:14] 2025-10-12 21:08:38,854 | INFO     | job 6838366482 has state=finished
[2025-10-13 08:09:14] 2025-10-12 21:08:38,855 | INFO     | preparing for final server update for job 6838366482 in state='finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:38,864 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:09:14] 2025-10-12 21:08:38,864 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:09:14] 2025-10-12 21:08:38,864 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:09:14] 2025-10-12 21:08:38,864 | INFO     | job 6838366482 has finished - writing final server update
[2025-10-13 08:09:14] 2025-10-12 21:08:38,864 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:09:14] 2025-10-12 21:08:38,865 | INFO     | executing command: lscpu
[2025-10-13 08:09:14] 2025-10-12 21:08:38,885 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:09:14] 2025-10-12 21:08:39,312 | INFO     | time since job start (4418s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:39,333 | INFO     | monitor loop #331: job 0:6838366482 is in state 'finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:39,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:09:14] 2025-10-12 21:08:41,318 | INFO     | time since job start (4420s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:41,836 | INFO     | monitor loop #332: job 0:6838366482 is in state 'finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:41,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:09:14] 2025-10-12 21:08:43,323 | INFO     | time since job start (4422s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:44,338 | INFO     | monitor loop #333: job 0:6838366482 is in state 'finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:44,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:09:14] 2025-10-12 21:08:45,328 | INFO     | time since job start (4424s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:46,841 | INFO     | monitor loop #334: job 0:6838366482 is in state 'finished'
[2025-10-13 08:09:14] 2025-10-12 21:08:46,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,334 | INFO     | time since job start (4426s) is within the limit (172800.0s)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,352 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:09:14] 2025-10-12 21:08:47,354 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2984.3804375
[2025-10-13 08:09:14] 2025-10-12 21:08:47,356 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838366482/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,356 | INFO     | extracted standard info from prmon json
[2025-10-13 08:09:14] 2025-10-12 21:08:47,356 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:09:14] 2025-10-12 21:08:47,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:09:14] 2025-10-12 21:08:47,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:09:14] 2025-10-12 21:08:47,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:09:14] 2025-10-12 21:08:47,357 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | sum of deviations: -10694024863.0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | mean x: 1760301182.0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | mean y: 2867190.815384615
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | -- intersect: 221114952241.50446
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | intersect: 221114952241.50446
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | chi2: 0.09791857888971658
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | -- intersect: 221114952241.50446
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | current memory leak: -125.61 B/s (using 65 data points, chi2=0.10)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | could have reported an average CPU frequency of 2769 MHz (6 samples)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | ..............................
[2025-10-13 08:09:14] 2025-10-12 21:08:47,358 | INFO     | . Timing measurements:
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . get job = 0 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . initial setup = 6 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . payload setup = 5 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . stage-in = 0 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . payload execution = 4390 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . stage-out = 0 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | . log creation = 0 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,359 | INFO     | ..............................
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | 
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | job summary report
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | --------------------------------------------------
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | PanDA job id: 6838366482
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | task id: 46676269
[2025-10-13 08:09:14] 2025-10-12 21:08:47,405 | INFO     | errors: (none)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | pilot state: finished 
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | transexitcode: 0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | exeerrorcode: 0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | exeerrordiag: 
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | exitcode: 0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | exitmsg: OK
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | cpuconsumptiontime: 46699 s
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | nevents: 400
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | neventsw: 0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | pid: 3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | pgrp: 3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | corecount: 12
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | event service: False
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 4399: 2375337, 4400: 2384335, 4402: 2384391, 4412: 2384713}
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | --------------------------------------------------
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | 
[2025-10-13 08:09:14] 2025-10-12 21:08:47,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | job 6838366482 has completed (purged errors)
[2025-10-13 08:09:14] 2025-10-12 21:08:47,424 | INFO     | overall cleanup function is called
[2025-10-13 08:09:14] 2025-10-12 21:08:48,431 | INFO     | --- collectZombieJob: --- 10, [3157392]
[2025-10-13 08:09:14] 2025-10-12 21:08:48,432 | INFO     | zombie collector waiting for pid 3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:48,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:09:14] 2025-10-12 21:08:48,432 | INFO     | collected zombie processes
[2025-10-13 08:09:14] 2025-10-12 21:08:48,432 | INFO     | will attempt to kill all subprocesses of pid=3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:48,507 | INFO     | process IDs to be killed: [3157392] (in reverse order)
[2025-10-13 08:09:14] 2025-10-12 21:08:48,560 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:09:14] 2025-10-12 21:08:48,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:09:14] 2025-10-12 21:08:48,563 | INFO     | did not find any defunct processes belonging to 3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:48,567 | INFO     | did not find any defunct processes belonging to 3157392
[2025-10-13 08:09:14] 2025-10-12 21:08:48,567 | INFO     | ready for new job
[2025-10-13 08:09:14] 2025-10-12 21:08:48,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:09:14] 2025-10-12 21:08:48,568 | INFO     | ***************************************
[2025-10-13 08:09:14] 2025-10-12 21:08:48,568 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:09:14] 2025-10-12 21:08:48,568 | INFO     | ***************************************
[2025-10-13 08:09:14] 2025-10-12 21:08:48,568 | INFO     | 
[2025-10-13 08:09:14] 2025-10-12 21:08:48,569 | INFO     | architecture information:
[2025-10-13 08:09:14] 2025-10-12 21:08:48,569 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:09:14] 2025-10-12 21:08:48,586 | INFO     | cat /etc/os-release:
[2025-10-13 08:09:14] NAME="CentOS Linux"
[2025-10-13 08:09:14] VERSION="7 (Core)"
[2025-10-13 08:09:14] ID="centos"
[2025-10-13 08:09:14] ID_LIKE="rhel fedora"
[2025-10-13 08:09:14] VERSION_ID="7"
[2025-10-13 08:09:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:09:14] ANSI_COLOR="0;31"
[2025-10-13 08:09:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:09:14] HOME_URL="https://www.centos.org/"
[2025-10-13 08:09:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:09:14] 
[2025-10-13 08:09:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:09:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:09:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:09:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:09:14] 
[2025-10-13 08:09:14] 2025-10-12 21:08:48,586 | INFO     | ***************************************
[2025-10-13 08:09:14] 2025-10-12 21:08:49,089 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 08:09:14] 2025-10-12 21:08:49,107 | INFO     | sufficient remaining disk space (407514382336 B)
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | INFO     | update_server=False
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:09:14] 2025-10-12 21:08:49,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:09:14] 2025-10-12 21:08:49,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:09:14] 2025-10-12 21:08:49,344 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:09:14] 2025-10-12 21:08:49,344 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:09:14] 2025-10-12 21:08:49,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:09:14] 2025-10-12 21:08:49,344 | INFO     | will abort loop
[2025-10-13 08:09:14] 2025-10-12 21:08:49,541 | INFO     | all payload control threads have been joined
[2025-10-13 08:09:14] 2025-10-12 21:08:49,626 | INFO     | all job control threads have been joined
[2025-10-13 08:09:14] 2025-10-12 21:08:49,919 | INFO     | all data control threads have been joined
[2025-10-13 08:09:14] 2025-10-12 21:08:50,113 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,114 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,349 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,501 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,546 | INFO     | [payload] control thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,632 | INFO     | [job] control thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,749 | INFO     | [job] validate thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:50,925 | INFO     | [data] control thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,059 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,063 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,065 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,114 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,130 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,291 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:51,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:08:52,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:09:14] 2025-10-12 21:08:56,528 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:09:14] 2025-10-12 21:09:08,106 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:09:14] 2025-10-12 21:09:09,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134801842128704)>', '<ExcThread(monitor, started 134801340217088)>']
[2025-10-13 08:09:14] 2025-10-12 21:09:10,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:09:14] 2025-10-12 21:09:10,212 | INFO     | [monitor] control thread has ended
[2025-10-13 08:09:14] 2025-10-12 21:09:14,527 | INFO     | all workflow threads have been joined
[2025-10-13 08:09:14] 2025-10-12 21:09:14,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:09:14] 2025-10-12 21:09:14,527 | INFO     | traces error code: 0
[2025-10-13 08:09:14] 2025-10-12 21:09:14,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:09:14] 2025-10-12 21:09:14,681 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:09:14] 2025-10-12 21:09:14,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:09:14] 2025-10-12 21:09:14,689 [wrapper] pilotpid: 3149946
[2025-10-13 08:09:14] 2025-10-12 21:09:14,692 [wrapper] Pilot exit status: 0
[2025-10-13 08:09:14] 2025-10-12 21:09:14,703 [wrapper] pandaids: 6838366482
[2025-10-13 08:09:14] 2025-10-12 21:09:14,740 [wrapper] cleanup supervisor_pilot 3214261 3149947
[2025-10-13 08:09:14] 2025-10-12 21:09:14,743 [wrapper] Test setup, not cleaning
[2025-10-13 08:09:14] 2025-10-12 21:09:14,746 [wrapper] apfmon messages muted
[2025-10-13 08:09:14] 2025-10-12 21:09:14,750 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:09:14] 2025-10-12 21:09:14,754 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:09:14]  *** Error codes and diagnostics ***
[2025-10-13 08:09:14]     "exeErrorCode": 0,
[2025-10-13 08:09:14]     "exeErrorDiag": "",
[2025-10-13 08:09:14]     "pilotErrorCode": 0,
[2025-10-13 08:09:14]     "pilotErrorDiag": "",
[2025-10-13 08:09:14]  *** Listing of results directory ***
[2025-10-13 08:09:14] total 413524
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:21 pilot3.tar.gz
[2025-10-13 08:09:14] -rwx------ 1 boinc boinc     36292 Oct 11 22:57 runpilot2-wrapper.sh
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:57 queuedata.json
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:09:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:54 run_atlas
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:54 job.xml
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc 222004245 Oct 13 06:54 EVNT.46676267._002303.pool.root.1
[2025-10-13 08:09:14] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:54 shared
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc    569676 Oct 13 06:54 input.tar.gz
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:54 start_atlas.sh
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:54 boinc_setup_complete
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc      9348 Oct 13 06:54 init_data.xml
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:54 boinc_lockfile
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:54 pandaJob.out
[2025-10-13 08:09:14] -rw------- 1 boinc boinc    975536 Oct 13 06:54 agis_schedconf.cvmfs.json
[2025-10-13 08:09:14] -rw------- 1 boinc boinc   1560580 Oct 13 06:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:09:14] drwx------ 5 boinc boinc      4096 Oct 13 06:55 pilot3
[2025-10-13 08:09:14] -rw------- 1 boinc boinc        95 Oct 13 08:08 pilot_heartbeat.json
[2025-10-13 08:09:14] -rw------- 1 boinc boinc 195485221 Oct 13 08:08 HITS.46676269._057365.pool.root.1
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:08 boinc_task_state.xml
[2025-10-13 08:09:14] -rw------- 1 boinc boinc      1018 Oct 13 08:08 memory_monitor_summary.json
[2025-10-13 08:09:14] -rw------- 1 boinc boinc    377677 Oct 13 08:08 log.46676269._057365.job.log.tgz.1
[2025-10-13 08:09:14] -rw------- 1 boinc boinc      7786 Oct 13 08:08 heartbeat.json
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:09 wrapper_checkpoint.txt
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:09 boinc_mmap_file
[2025-10-13 08:09:14] -rw------- 1 boinc boinc      4739 Oct 13 08:09 pilotlog.txt
[2025-10-13 08:09:14] -rw------- 1 boinc boinc    643707 Oct 13 08:09 log.46676269._057365.job.log.1
[2025-10-13 08:09:14] -rw------- 1 boinc boinc       357 Oct 13 08:09 output.list
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:09 runtime_log
[2025-10-13 08:09:14] -rw------- 1 boinc boinc   1044480 Oct 13 08:09 result.tar.gz
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc      8703 Oct 13 08:09 runtime_log.err
[2025-10-13 08:09:14] -rw------- 1 boinc boinc       650 Oct 13 08:09 EvjNDm8OnR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHqRMDmCBhion.diag
[2025-10-13 08:09:14] -rw-r--r-- 1 boinc boinc     21901 Oct 13 08:09 stderr.txt
[2025-10-13 08:09:14] HITS file was successfully produced:
[2025-10-13 08:09:14] -rw------- 1 boinc boinc 195485221 Oct 13 08:08 shared/HITS.pool.root.1
[2025-10-13 08:09:14]  *** Contents of shared directory: ***
[2025-10-13 08:09:14] total 409312
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc 222004245 Oct 13 06:54 ATLAS.root_0
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc    569676 Oct 13 06:54 input.tar.gz
[2025-10-13 08:09:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:54 start_atlas.sh
[2025-10-13 08:09:14] -rw------- 1 boinc boinc 195485221 Oct 13 08:08 HITS.pool.root.1
[2025-10-13 08:09:14] -rw------- 1 boinc boinc   1044480 Oct 13 08:09 result.tar.gz
08:09:16 (3146096): run_atlas exited; CPU time 46656.458862
08:09:16 (3146096): called boinc_finish(0)

</stderr_txt>
]]>

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