Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:25:59 (1115714): wrapper (7.7.26015): starting
10:25:59 (1115714): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 10:25:59] Arguments: --nthreads 12
[2025-10-11 10:25:59] Threads: 12
[2025-10-11 10:25:59] Checking for CVMFS
[2025-10-11 10:25:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:26:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:26:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:26:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:26:00] 2.11.3.0 3020 22814 157044 151591 1 236 40911760 45568000 22097 130560 0 320058609 99.891 117553343 27119 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 10:26:00] CVMFS is ok
[2025-10-11 10:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:26:00] Further information can be found at the LHC@home message board.
[2025-10-11 10:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:26:00] Checking for apptainer binary...
[2025-10-11 10:26:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:26:00] Running /usr/bin/apptainer --version
[2025-10-11 10:26:00] apptainer version 1.4.1-1.el9
[2025-10-11 10:26:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:26:00] wns0169.triumf.lcg
[2025-10-11 10:26:00] apptainer works
[2025-10-11 10:26:00] Set ATHENA_PROC_NUMBER=12
[2025-10-11 10:26:00] Set ATHENA_CORE_NUMBER=12
[2025-10-11 10:26:00] Starting ATLAS job with PandaID=6838454791
[2025-10-11 10:26:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:31:30]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | wrong length of table data, x=[1760203655.0], y=[953.0] (must be same and length>=4)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | could have reported an average CPU frequency of 2822 MHz (4 samples)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . Timing measurements:
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . get job = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . initial setup = 4 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload setup = 14 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-in = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload execution = 47 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-out = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . log creation = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838454791/pilotlog.txt
[2025-10-11 10:31:31] 2025-10-11 17:30:24,788 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 10:31:31] - Log from pilotlog.txt -
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838454791/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | extracted standard info from prmon json
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:31:31] 2025-10-11 17:30:24,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | wrong length of table data, x=[1760203655.0], y=[953.0] (must be same and length>=4)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | could have reported an average CPU frequency of 2822 MHz (4 samples)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . Timing measurements:
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . get job = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . initial setup = 4 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload setup = 14 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-in = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload execution = 47 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-out = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . log creation = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838454791/pilotlog.txt
[2025-10-11 10:31:31] 2025-10-11 17:30:24,788 | WARNING  | 
[2025-10-11 10:31:31] [begin log extracts]
[2025-10-11 10:31:31] - Log from pilotlog.txt -
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838454791/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | extracted standard info from prmon json
[2025-10-11 10:31:31] 2025-10-11 17:30:24,748 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:31:31] 2025-10-11 17:30:24,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | WARNING  | wrong length of table data, x=[1760203655.0], y=[953.0] (must be same and length>=4)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | could have reported an average CPU frequency of 2822 MHz (4 samples)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,754 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . Timing measurements:
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . get job = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . initial setup = 4 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload setup = 14 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-in = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . payload execution = 47 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . stage-out = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | . log creation = 0 s
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | ..............................
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:31:31] 2025-10-11 17:30:24,755 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838454791/pilotlog.txt
[2025-10-11 10:31:31] [end log extracts]
[2025-10-11 10:31:31] 2025-10-11 17:30:24,788 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 10:31:31] 2025-10-11 17:30:24,789 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 10:31:31] 2025-10-11 17:30:25,368 | INFO     | 
[2025-10-11 10:31:31] 2025-10-11 17:30:25,368 | INFO     | job summary report
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | --------------------------------------------------
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | PanDA job id: 6838454791
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | task id: 46676269
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 10:27:56,213 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | pilot state: failed 
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | transexitcode: 65
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | exeerrorcode: 65
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | exitcode: 65
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | cpuconsumptiontime: 15 s
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | nevents: 0
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | neventsw: 0
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | pid: 1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | pgrp: 1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | corecount: 12
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | event service: False
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | sizes: {0: 2348683, 1: 2348882, 11: 2348882, 12: 2349172, 22: 2349200, 65: 2372506, 67: 2376798, 70: 2376826, 205: 2376992}
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | --------------------------------------------------
[2025-10-11 10:31:31] 2025-10-11 17:30:25,369 | INFO     | 
[2025-10-11 10:31:31] 2025-10-11 17:30:25,370 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 10:31:31] 2025-10-11 17:30:25,485 | INFO     | time since job start (241s) is within the limit (172800.0s)
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:31:31] 2025-10-11 17:30:25,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:31:31] 2025-10-11 17:30:25,504 | INFO     | job 6838454791 has completed (purged errors)
[2025-10-11 10:31:31] 2025-10-11 17:30:25,504 | INFO     | overall cleanup function is called
[2025-10-11 10:31:31] 2025-10-11 17:30:26,509 | INFO     | --- collectZombieJob: --- 10, [1126125]
[2025-10-11 10:31:31] 2025-10-11 17:30:26,509 | INFO     | zombie collector waiting for pid 1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:26,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:31:31] 2025-10-11 17:30:26,510 | INFO     | collected zombie processes
[2025-10-11 10:31:31] 2025-10-11 17:30:26,510 | INFO     | will attempt to kill all subprocesses of pid=1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:26,708 | INFO     | process IDs to be killed: [1126125] (in reverse order)
[2025-10-11 10:31:31] 2025-10-11 17:30:26,771 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:31:31] 2025-10-11 17:30:26,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:31:31] 2025-10-11 17:30:26,780 | INFO     | did not find any defunct processes belonging to 1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:26,789 | INFO     | did not find any defunct processes belonging to 1126125
[2025-10-11 10:31:31] 2025-10-11 17:30:26,789 | INFO     | ready for new job
[2025-10-11 10:31:31] 2025-10-11 17:30:26,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:31:31] 2025-10-11 17:30:26,791 | INFO     | ***************************************
[2025-10-11 10:31:31] 2025-10-11 17:30:26,791 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:31:31] 2025-10-11 17:30:26,791 | INFO     | ***************************************
[2025-10-11 10:31:31] 2025-10-11 17:30:26,791 | INFO     | 
[2025-10-11 10:31:31] 2025-10-11 17:30:26,793 | INFO     | architecture information:
[2025-10-11 10:31:31] 2025-10-11 17:30:26,793 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:31:31] 2025-10-11 17:30:26,808 | INFO     | cat /etc/os-release:
[2025-10-11 10:31:31] NAME="CentOS Linux"
[2025-10-11 10:31:31] VERSION="7 (Core)"
[2025-10-11 10:31:31] ID="centos"
[2025-10-11 10:31:31] ID_LIKE="rhel fedora"
[2025-10-11 10:31:31] VERSION_ID="7"
[2025-10-11 10:31:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:31:31] ANSI_COLOR="0;31"
[2025-10-11 10:31:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:31:31] HOME_URL="https://www.centos.org/"
[2025-10-11 10:31:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:31:31] 
[2025-10-11 10:31:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:31:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:31:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:31:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:31:31] 
[2025-10-11 10:31:31] 2025-10-11 17:30:26,808 | INFO     | ***************************************
[2025-10-11 10:31:31] 2025-10-11 17:30:27,311 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 10:31:31] 2025-10-11 17:30:27,375 | INFO     | sufficient remaining disk space (2390326509568 B)
[2025-10-11 10:31:31] 2025-10-11 17:30:27,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:31:31] 2025-10-11 17:30:27,376 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:31:31] 2025-10-11 17:30:27,376 | INFO     | update_server=False
[2025-10-11 10:31:31] 2025-10-11 17:30:27,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:31:31] 2025-10-11 17:30:27,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:31:31] 2025-10-11 17:30:27,378 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 10:31:31] 2025-10-11 17:30:27,379 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:31:31] 2025-10-11 17:30:27,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:31:31] 2025-10-11 17:30:27,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:31:31] 2025-10-11 17:30:27,642 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 10:31:31] 2025-10-11 17:30:27,642 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 10:31:31] 2025-10-11 17:30:27,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:31:31] 2025-10-11 17:30:27,642 | INFO     | will abort loop
[2025-10-11 10:31:31] 2025-10-11 17:30:27,867 | INFO     | all data control threads have been joined
[2025-10-11 10:31:31] 2025-10-11 17:30:27,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:31:31] 2025-10-11 17:30:28,381 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:28,648 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:28,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:28,769 | INFO     | all job control threads have been joined
[2025-10-11 10:31:31] 2025-10-11 17:30:28,873 | INFO     | [data] control thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:28,894 | INFO     | all payload control threads have been joined
[2025-10-11 10:31:31] 2025-10-11 17:30:29,052 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,180 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,267 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,530 | INFO     | [job] validate thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,706 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,775 | INFO     | [job] control thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,791 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:31:31] 2025-10-11 17:30:29,899 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:29,901 | INFO     | [payload] control thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:30,894 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:30:31,388 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:31:31] 2025-10-11 17:31:23,975 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:31:31] 2025-10-11 17:31:25,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301628729152)>', '<ExcThread(monitor, started 140300718688000)>']
[2025-10-11 10:31:31] 2025-10-11 17:31:25,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:31:31] 2025-10-11 17:31:25,733 | INFO     | [monitor] control thread has ended
[2025-10-11 10:31:31] 2025-10-11 17:31:30,402 | INFO     | all workflow threads have been joined
[2025-10-11 10:31:31] 2025-10-11 17:31:30,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:31:31] 2025-10-11 17:31:30,402 | INFO     | traces error code: 0
[2025-10-11 10:31:31] 2025-10-11 17:31:30,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:31:31] 2025-10-11 17:31:30,608 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:31:31] 2025-10-11 17:31:30,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:31:31] 2025-10-11 17:31:30,611 [wrapper] pilotpid: 1119402
[2025-10-11 10:31:31] 2025-10-11 17:31:30,613 [wrapper] Pilot exit status: 0
[2025-10-11 10:31:31] 2025-10-11 17:31:30,622 [wrapper] pandaids: 6838454791
[2025-10-11 10:31:31] 2025-10-11 17:31:30,665 [wrapper] cleanup supervisor_pilot 1119408 1119403
[2025-10-11 10:31:31] 2025-10-11 17:31:30,667 [wrapper] Test setup, not cleaning
[2025-10-11 10:31:31] 2025-10-11 17:31:30,669 [wrapper] apfmon messages muted
[2025-10-11 10:31:31] 2025-10-11 17:31:30,670 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:31:31] 2025-10-11 17:31:30,672 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:31:31]  *** Error codes and diagnostics ***
[2025-10-11 10:31:31]     "exeErrorCode": 65,
[2025-10-11 10:31:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 10:31:31]     "pilotErrorCode": 1305,
[2025-10-11 10:31:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 10:31:31]  *** Listing of results directory ***
[2025-10-11 10:31:31] total 221012
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc    557409 Oct 11 07:01 pilot3.tar.gz
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc      5112 Oct 11 07:50 queuedata.json
[2025-10-11 10:31:31] -rwx------. 1 boinc boinc     36292 Oct 11 07:50 runpilot2-wrapper.sh
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc       100 Oct 11 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:31:31] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 10:25 run_atlas
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc       105 Oct 11 10:25 job.xml
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc      6627 Oct 11 10:25 init_data.xml
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc 222181755 Oct 11 10:25 EVNT.46676267._002400.pool.root.1
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:25 start_atlas.sh
[2025-10-11 10:31:31] drwxrwx--x. 2 boinc boinc      4096 Oct 11 10:25 shared
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc    569682 Oct 11 10:25 input.tar.gz
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc         0 Oct 11 10:25 boinc_lockfile
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc      2550 Oct 11 10:26 pandaJob.out
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc    975520 Oct 11 10:26 agis_schedconf.cvmfs.json
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc   1560580 Oct 11 10:26 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:31:31] drwx------. 5 boinc boinc      4096 Oct 11 10:26 pilot3
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc       523 Oct 11 10:27 boinc_task_state.xml
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc       955 Oct 11 10:28 memory_monitor_summary.json
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc     21943 Oct 11 10:28 log.46676269._059477.job.log.tgz.1
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc        95 Oct 11 10:30 pilot_heartbeat.json
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc      8388 Oct 11 10:30 heartbeat.json
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc        22 Oct 11 10:31 wrapper_checkpoint.txt
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc      8192 Oct 11 10:31 boinc_mmap_file
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc      4737 Oct 11 10:31 pilotlog.txt
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc     91620 Oct 11 10:31 log.46676269._059477.job.log.1
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc       188 Oct 11 10:31 output.list
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc       620 Oct 11 10:31 runtime_log
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc    133120 Oct 11 10:31 result.tar.gz
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc      8528 Oct 11 10:31 runtime_log.err
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc       645 Oct 11 10:31 PP1MDmw6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmr4RMDmCnH1Wm.diag
[2025-10-11 10:31:31] -rw-r--r--. 1 boinc boinc     21773 Oct 11 10:31 stderr.txt
[2025-10-11 10:31:31] No HITS result produced
[2025-10-11 10:31:31]  *** Contents of shared directory: ***
[2025-10-11 10:31:31] total 217688
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc 222181755 Oct 11 10:25 ATLAS.root_0
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:25 start_atlas.sh
[2025-10-11 10:31:31] -rw-r--r--. 2 boinc boinc    569682 Oct 11 10:25 input.tar.gz
[2025-10-11 10:31:31] -rw-------. 1 boinc boinc    133120 Oct 11 10:31 result.tar.gz
10:31:32 (1115714): run_atlas exited; CPU time 24.248195
10:31:32 (1115714): called boinc_finish(0)

</stderr_txt>
]]>

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