Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:01:42 (1987038): wrapper (7.7.26015): starting
13:01:42 (1987038): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:01:42] Arguments: --nthreads 12
[2025-10-11 13:01:42] Threads: 12
[2025-10-11 13:01:42] Checking for CVMFS
[2025-10-11 13:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:01:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:01:43] 2.13.2.0 135553 3027 118784 151590 3 283 31650689 32503809 6993 16776704 0 49891500 99.971 3196471 51571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:01:43] CVMFS is ok
[2025-10-11 13:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:01:43] Further information can be found at the LHC@home message board.
[2025-10-11 13:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:01:43] Checking for apptainer binary...
[2025-10-11 13:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:01:43] Running /usr/bin/apptainer --version
[2025-10-11 13:01:43] apptainer version 1.4.3-1.el9
[2025-10-11 13:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:01:43] c8-7-2.aglt2.org
[2025-10-11 13:01:43] apptainer works
[2025-10-11 13:01:43] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:01:43] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:01:43] Starting ATLAS job with PandaID=6838293401
[2025-10-11 13:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:30:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:30:13]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6838293401/log.46676269._055349.job.log.tgz.1
[2025-10-11 13:30:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/76/log.46676269._055349.job.log.tgz.1
[2025-10-11 13:30:13]  workdir=None
[2025-10-11 13:30:13] ]
[2025-10-11 13:30:13] 2025-10-11 17:29:33,208 | INFO     | transferring file log.46676269._055349.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6838293401/log.46676269._055349.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 13:30:13] 2025-10-11 17:29:33,208 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6838293401/log.46676269._055349.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._055349.job
[2025-10-11 13:30:13] 2025-10-11 17:29:33,223 | INFO     | adding to output.list: log.46676269._055349.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/76/log.46676269._055349.job.log.tg
[2025-10-11 13:30:13] 2025-10-11 17:29:33,224 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 13:30:13] 2025-10-11 17:29:33,224 | INFO     | summary of transferred files:
[2025-10-11 13:30:13] 2025-10-11 17:29:33,224 | INFO     |  -- lfn=log.46676269._055349.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 13:30:13] 2025-10-11 17:29:33,224 | INFO     | stage-out finished correctly
[2025-10-11 13:30:13] 2025-10-11 17:29:34,522 | INFO     | monitor loop #127: job 0:6838293401 is in state 'finished'
[2025-10-11 13:30:13] 2025-10-11 17:29:34,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:30:13] 2025-10-11 17:29:35,126 | INFO     | time since job start (1664s) is within the limit (172800.0s)
[2025-10-11 13:30:13] 2025-10-11 17:29:35,150 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 13:30:13] 2025-10-11 17:29:36,005 | INFO     | job 6838293401 has state=finished
[2025-10-11 13:30:13] 2025-10-11 17:29:36,006 | INFO     | preparing for final server update for job 6838293401 in state='finished'
[2025-10-11 13:30:13] 2025-10-11 17:29:36,068 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | this job has now completed (state=finished)
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | log transfer has been attempted: DONE
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | job 6838293401 has finished - writing final server update
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | total number of processed events: 400 (read)
[2025-10-11 13:30:13] 2025-10-11 17:29:36,069 | INFO     | executing command: lscpu
[2025-10-11 13:30:13] 2025-10-11 17:29:36,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 13:30:13] 2025-10-11 17:29:37,025 | INFO     | monitor loop #128: job 0:6838293401 is in state 'finished'
[2025-10-11 13:30:13] 2025-10-11 17:29:37,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:30:13] 2025-10-11 17:29:37,132 | INFO     | time since job start (1666s) is within the limit (172800.0s)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,137 | INFO     | time since job start (1668s) is within the limit (172800.0s)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,529 | INFO     | monitor loop #129: job 0:6838293401 is in state 'finished'
[2025-10-11 13:30:13] 2025-10-11 17:29:39,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,865 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 13:30:13] 2025-10-11 17:29:39,870 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3628.2701328124986
[2025-10-11 13:30:13] 2025-10-11 17:29:39,884 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838293401/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,884 | INFO     | extracted standard info from prmon json
[2025-10-11 13:30:13] 2025-10-11 17:29:39,885 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:30:13] 2025-10-11 17:29:39,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:30:13] 2025-10-11 17:29:39,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:30:13] 2025-10-11 17:29:39,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:30:13] 2025-10-11 17:29:39,885 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | sum of square deviations: 2474465.0
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | sum of deviations: -95450573.5
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | mean x: 1760203018.5
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | mean y: 2387068.95
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | -- intersect: 67900857078.5303
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | intersect: 67900857078.5303
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | chi2: 0.0009911235433941756
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | -- intersect: 67900857078.5303
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | current memory leak: -38.57 B/s (using 20 data points, chi2=0.00)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | could have reported an average CPU frequency of 3591 MHz (4 samples)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | ..............................
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . Timing measurements:
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . get job = 0 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . initial setup = 2 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . payload setup = 4 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . stage-in = 0 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . payload execution = 1638 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,886 | INFO     | . stage-out = 0 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,887 | INFO     | . log creation = 0 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,887 | INFO     | ..............................
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | 
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | job summary report
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | --------------------------------------------------
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | PanDA job id: 6838293401
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | task id: 46676269
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | errors: (none)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | pilot state: finished 
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | transexitcode: 0
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | exeerrorcode: 0
[2025-10-11 13:30:13] 2025-10-11 17:29:39,919 | INFO     | exeerrordiag: 
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | exitcode: 0
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | exitmsg: OK
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | cpuconsumptiontime: 17140 s
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | nevents: 400
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | neventsw: 0
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | pid: 2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | pgrp: 2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | corecount: 12
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | event service: False
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | sizes: {0: 2348856, 4: 2349118, 11: 2349146, 1647: 2382962, 1649: 2382962, 1654: 2383156}
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | --------------------------------------------------
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | 
[2025-10-11 13:30:13] 2025-10-11 17:29:39,920 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | job 6838293401 has completed (purged errors)
[2025-10-11 13:30:13] 2025-10-11 17:29:39,936 | INFO     | overall cleanup function is called
[2025-10-11 13:30:13] 2025-10-11 17:29:40,622 | INFO     | PID=1996212 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:30:13] 2025-10-11 17:29:40,622 | INFO     | .. there are 11 such processes running
[2025-10-11 13:30:13] 2025-10-11 17:29:40,944 | INFO     | --- collectZombieJob: --- 10, [2003394]
[2025-10-11 13:30:13] 2025-10-11 17:29:40,944 | INFO     | zombie collector waiting for pid 2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:40,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:30:13] 2025-10-11 17:29:40,944 | INFO     | collected zombie processes
[2025-10-11 13:30:13] 2025-10-11 17:29:40,944 | INFO     | will attempt to kill all subprocesses of pid=2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:41,184 | INFO     | process IDs to be killed: [2003394] (in reverse order)
[2025-10-11 13:30:13] 2025-10-11 17:29:41,299 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:30:13] 2025-10-11 17:29:41,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:30:13] 2025-10-11 17:29:41,317 | INFO     | did not find any defunct processes belonging to 2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:41,332 | INFO     | did not find any defunct processes belonging to 2003394
[2025-10-11 13:30:13] 2025-10-11 17:29:41,333 | INFO     | ready for new job
[2025-10-11 13:30:13] 2025-10-11 17:29:41,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:30:13] 2025-10-11 17:29:41,334 | INFO     | ***************************************
[2025-10-11 13:30:13] 2025-10-11 17:29:41,334 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:30:13] 2025-10-11 17:29:41,334 | INFO     | ***************************************
[2025-10-11 13:30:13] 2025-10-11 17:29:41,335 | INFO     | 
[2025-10-11 13:30:13] 2025-10-11 17:29:41,352 | INFO     | architecture information:
[2025-10-11 13:30:13] 2025-10-11 17:29:41,353 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:30:13] 2025-10-11 17:29:41,366 | INFO     | cat /etc/os-release:
[2025-10-11 13:30:13] NAME="CentOS Linux"
[2025-10-11 13:30:13] VERSION="7 (Core)"
[2025-10-11 13:30:13] ID="centos"
[2025-10-11 13:30:13] ID_LIKE="rhel fedora"
[2025-10-11 13:30:13] VERSION_ID="7"
[2025-10-11 13:30:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:30:13] ANSI_COLOR="0;31"
[2025-10-11 13:30:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:30:13] HOME_URL="https://www.centos.org/"
[2025-10-11 13:30:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:30:13] 
[2025-10-11 13:30:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:30:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:30:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:30:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:30:13] 
[2025-10-11 13:30:13] 2025-10-11 17:29:41,367 | INFO     | ***************************************
[2025-10-11 13:30:13] 2025-10-11 17:29:41,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 13:30:13] 2025-10-11 17:29:41,882 | INFO     | sufficient remaining disk space (90874839040 B)
[2025-10-11 13:30:13] 2025-10-11 17:29:41,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:30:13] 2025-10-11 17:29:41,882 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:30:13] 2025-10-11 17:29:41,882 | INFO     | update_server=False
[2025-10-11 13:30:13] 2025-10-11 17:29:41,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:30:13] 2025-10-11 17:29:41,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:30:13] 2025-10-11 17:29:41,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:30:13] 2025-10-11 17:29:41,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:30:13] 2025-10-11 17:29:42,027 | INFO     | all data control threads have been joined
[2025-10-11 13:30:13] 2025-10-11 17:29:42,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:30:13] 2025-10-11 17:29:42,032 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:30:13] 2025-10-11 17:29:42,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:30:13] 2025-10-11 17:29:42,033 | INFO     | will abort loop
[2025-10-11 13:30:13] 2025-10-11 17:29:42,244 | INFO     | all job control threads have been joined
[2025-10-11 13:30:13] 2025-10-11 17:29:42,531 | INFO     | all payload control threads have been joined
[2025-10-11 13:30:13] 2025-10-11 17:29:42,888 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:42,889 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:42,909 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,033 | INFO     | [data] control thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,037 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,249 | INFO     | [job] control thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,316 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,535 | INFO     | [payload] control thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,551 | INFO     | [job] validate thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,659 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,754 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:43,889 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:44,047 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:44,154 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:45,889 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:52,435 | INFO     | job.realtimelogging is not enabled
[2025-10-11 13:30:13] 2025-10-11 17:29:53,428 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:30:13] 2025-10-11 17:29:53,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:30:13] 2025-10-11 17:29:55,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284914239296)>', '<ExcThread(monitor, started 140284268623616)>']
[2025-10-11 13:30:13] 2025-10-11 17:30:00,216 | INFO     | all workflow threads have been joined
[2025-10-11 13:30:13] 2025-10-11 17:30:00,217 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:30:13] 2025-10-11 17:30:00,217 | INFO     | traces error code: 0
[2025-10-11 13:30:13] 2025-10-11 17:30:00,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:30:13] 2025-10-11 17:30:13,201 | INFO     | PID=1996212 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | INFO     | .. there are 11 such processes running
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:30:13] 2025-10-11 17:30:13,202 | INFO     | [monitor] control thread has ended
[2025-10-11 13:30:13] 2025-10-11 17:30:13,295 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:30:13] 2025-10-11 17:30:13,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:30:13] 2025-10-11 17:30:13,300 [wrapper] pilotpid: 1996212
[2025-10-11 13:30:13] 2025-10-11 17:30:13,302 [wrapper] Pilot exit status: 0
[2025-10-11 13:30:13] 2025-10-11 17:30:13,311 [wrapper] pandaids: 6838293401
[2025-10-11 13:30:13] 2025-10-11 17:30:13,407 [wrapper] cleanup supervisor_pilot 2099153 1996213
[2025-10-11 13:30:13] 2025-10-11 17:30:13,410 [wrapper] Test setup, not cleaning
[2025-10-11 13:30:13] 2025-10-11 17:30:13,412 [wrapper] apfmon messages muted
[2025-10-11 13:30:13] 2025-10-11 17:30:13,414 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:30:13] 2025-10-11 17:30:13,417 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:30:13]  *** Error codes and diagnostics ***
[2025-10-11 13:30:13]     "exeErrorCode": 0,
[2025-10-11 13:30:13]     "exeErrorDiag": "",
[2025-10-11 13:30:13]     "pilotErrorCode": 0,
[2025-10-11 13:30:13]     "pilotErrorDiag": "",
[2025-10-11 13:30:13]  *** Listing of results directory ***
[2025-10-11 13:30:13] total 414208
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:19 pilot3.tar.gz
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:25 queuedata.json
[2025-10-11 13:30:13] -rwx------. 1 boincer umatlas     36292 Oct 11 05:26 runpilot2-wrapper.sh
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:30:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:01 run_atlas
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:01 job.xml
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas 222525363 Oct 11 13:01 EVNT.46676267._002219.pool.root.1
[2025-10-11 13:30:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:01 shared
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 13:01 input.tar.gz
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:01 start_atlas.sh
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:01 boinc_lockfile
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 13:01 pandaJob.out
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas    975512 Oct 11 13:01 agis_schedconf.cvmfs.json
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:30:13] drwx------. 5 boincer umatlas      4096 Oct 11 13:01 pilot3
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 13:28 init_data.xml
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas 196463089 Oct 11 13:29 HITS.46676269._055349.pool.root.1
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas       529 Oct 11 13:29 boinc_task_state.xml
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas        95 Oct 11 13:29 pilot_heartbeat.json
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas      1031 Oct 11 13:29 memory_monitor_summary.json
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas    351562 Oct 11 13:29 log.46676269._055349.job.log.tgz.1
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas      7774 Oct 11 13:29 heartbeat.json
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas        27 Oct 11 13:30 wrapper_checkpoint.txt
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas       823 Oct 11 13:30 pilotlog.txt
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas    278687 Oct 11 13:30 log.46676269._055349.job.log.1
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas       357 Oct 11 13:30 output.list
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:30 runtime_log
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas    645120 Oct 11 13:30 result.tar.gz
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:30 boinc_mmap_file
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas       648 Oct 11 13:30 yOxLDmy2kR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5cRMDmDLTA1n.diag
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 13:30 runtime_log.err
[2025-10-11 13:30:13] -rw-r--r--. 1 boincer umatlas     22280 Oct 11 13:30 stderr.txt
[2025-10-11 13:30:13] HITS file was successfully produced:
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas 196463089 Oct 11 13:29 shared/HITS.pool.root.1
[2025-10-11 13:30:13]  *** Contents of shared directory: ***
[2025-10-11 13:30:13] total 410388
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas 222525363 Oct 11 13:01 ATLAS.root_0
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 13:01 input.tar.gz
[2025-10-11 13:30:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:01 start_atlas.sh
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas 196463089 Oct 11 13:29 HITS.pool.root.1
[2025-10-11 13:30:13] -rw-------. 1 boincer umatlas    645120 Oct 11 13:30 result.tar.gz
13:30:15 (1987038): run_atlas exited; CPU time 17180.486091
13:30:15 (1987038): called boinc_finish(0)

</stderr_txt>
]]>

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