Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:06:23 (28925): wrapper (7.7.26015): starting
13:06:23 (28925): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:06:23] Arguments: --nthreads 12
[2025-10-11 13:06:23] Threads: 12
[2025-10-11 13:06:23] Checking for CVMFS
[2025-10-11 13:06:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:06:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:06:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:06:23] 2.11.2.0 2913 221720 100820 151590 0 59 13936349 20275200 1 130560 1 107703687 99.984 13290753 12512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 13:06:23] CVMFS is ok
[2025-10-11 13:06:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:06:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:06:23] Further information can be found at the LHC@home message board.
[2025-10-11 13:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:06:23] Checking for apptainer binary...
[2025-10-11 13:06:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:06:23] Running /usr/bin/apptainer --version
[2025-10-11 13:06:23] apptainer version 1.3.2-1.el7
[2025-10-11 13:06:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:06:24] c-205-6.aglt2.org
[2025-10-11 13:06:24] apptainer works
[2025-10-11 13:06:24] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:06:24] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:06:24] Starting ATLAS job with PandaID=6838119545
[2025-10-11 13:06:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:18:59]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:18:59]  storage_token=
[2025-10-11 14:18:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838119545/log.46676269._052895.job.log.tgz.1
[2025-10-11 14:18:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/e2/log.46676269._052895.job.log.tgz.1
[2025-10-11 14:18:59]  workdir=None
[2025-10-11 14:18:59] ]
[2025-10-11 14:18:59] 2025-10-11 18:18:17,648 | INFO     | transferring file log.46676269._052895.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838119545/log.46676269._052895.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 14:18:59] 2025-10-11 18:18:17,648 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838119545/log.46676269._052895.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._052895.job
[2025-10-11 14:18:59] 2025-10-11 18:18:17,677 | INFO     | adding to output.list: log.46676269._052895.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/e2/log.46676269._052895.job.log.tg
[2025-10-11 14:18:59] 2025-10-11 18:18:17,678 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 14:18:59] 2025-10-11 18:18:17,679 | INFO     | summary of transferred files:
[2025-10-11 14:18:59] 2025-10-11 18:18:17,679 | INFO     |  -- lfn=log.46676269._052895.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 14:18:59] 2025-10-11 18:18:17,679 | INFO     | stage-out finished correctly
[2025-10-11 14:18:59] 2025-10-11 18:18:18,226 | INFO     | time since job start (4299s) is within the limit (172800.0s)
[2025-10-11 14:18:59] 2025-10-11 18:18:18,536 | INFO     | monitor loop #321: job 0:6838119545 is in state 'finished'
[2025-10-11 14:18:59] 2025-10-11 18:18:18,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:18:59] 2025-10-11 18:18:19,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 14:18:59] 2025-10-11 18:18:20,231 | INFO     | time since job start (4301s) is within the limit (172800.0s)
[2025-10-11 14:18:59] 2025-10-11 18:18:21,039 | INFO     | monitor loop #322: job 0:6838119545 is in state 'finished'
[2025-10-11 14:18:59] 2025-10-11 18:18:21,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:18:59] 2025-10-11 18:18:21,628 | INFO     | job 6838119545 has state=finished
[2025-10-11 14:18:59] 2025-10-11 18:18:21,628 | INFO     | preparing for final server update for job 6838119545 in state='finished'
[2025-10-11 14:18:59] 2025-10-11 18:18:21,629 | INFO     | this job has now completed (state=finished)
[2025-10-11 14:18:59] 2025-10-11 18:18:21,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 14:18:59] 2025-10-11 18:18:21,629 | INFO     | log transfer has been attempted: DONE
[2025-10-11 14:18:59] 2025-10-11 18:18:21,630 | INFO     | job 6838119545 has finished - writing final server update
[2025-10-11 14:18:59] 2025-10-11 18:18:21,630 | INFO     | total number of processed events: 400 (read)
[2025-10-11 14:18:59] 2025-10-11 18:18:21,631 | INFO     | executing command: lscpu
[2025-10-11 14:18:59] 2025-10-11 18:18:21,658 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 14:18:59] 2025-10-11 18:18:22,237 | INFO     | time since job start (4303s) is within the limit (172800.0s)
[2025-10-11 14:18:59] 2025-10-11 18:18:23,363 | INFO     | PID=32594 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 14:18:59] 2025-10-11 18:18:23,550 | INFO     | monitor loop #323: job 0:6838119545 is in state 'finished'
[2025-10-11 14:18:59] 2025-10-11 18:18:23,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:18:59] 2025-10-11 18:18:24,364 | INFO     | time since job start (4305s) is within the limit (172800.0s)
[2025-10-11 14:18:59] 2025-10-11 18:18:26,053 | INFO     | monitor loop #324: job 0:6838119545 is in state 'finished'
[2025-10-11 14:18:59] 2025-10-11 18:18:26,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:18:59] 2025-10-11 18:18:26,369 | INFO     | time since job start (4307s) is within the limit (172800.0s)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,480 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 14:18:59] 2025-10-11 18:18:27,483 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-11 14:18:59] 2025-10-11 18:18:27,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838119545/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,488 | INFO     | extracted standard info from prmon json
[2025-10-11 14:18:59] 2025-10-11 18:18:27,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:18:59] 2025-10-11 18:18:27,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:18:59] 2025-10-11 18:18:27,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:18:59] 2025-10-11 18:18:27,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:18:59] 2025-10-11 18:18:27,490 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | sum of square deviations: 77515872.0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | sum of deviations: 973786066.0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | mean x: 1760204624.0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | mean y: 2667374.238095238
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | -- intersect: -22109742535.308807
[2025-10-11 14:18:59] 2025-10-11 18:18:27,491 | INFO     | intersect: -22109742535.308807
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | chi2: 0.028698418775234824
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | -- intersect: -22109742535.308807
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | current memory leak: 12.56 B/s (using 63 data points, chi2=0.03)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | ..............................
[2025-10-11 14:18:59] 2025-10-11 18:18:27,492 | INFO     | . Timing measurements:
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . get job = 0 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . initial setup = 2 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . payload setup = 6 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . stage-in = 0 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . payload execution = 4270 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . stage-out = 0 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | . log creation = 0 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,493 | INFO     | ..............................
[2025-10-11 14:18:59] 2025-10-11 18:18:27,574 | INFO     | 
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | job summary report
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | --------------------------------------------------
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | PanDA job id: 6838119545
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | task id: 46676269
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | errors: (none)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | pilot state: finished 
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | transexitcode: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | exeerrorcode: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | exeerrordiag: 
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | exitcode: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,576 | INFO     | exitmsg: OK
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | cpuconsumptiontime: 45576 s
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | nevents: 400
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | neventsw: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | pid: 6768
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | pgrp: 6768
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | corecount: 12
[2025-10-11 14:18:59] 2025-10-11 18:18:27,577 | INFO     | event service: False
[2025-10-11 14:18:59] 2025-10-11 18:18:27,578 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4280: 2375194, 4282: 2384192, 4284: 2384248, 4292: 2384570}
[2025-10-11 14:18:59] 2025-10-11 18:18:27,578 | INFO     | --------------------------------------------------
[2025-10-11 14:18:59] 2025-10-11 18:18:27,578 | INFO     | 
[2025-10-11 14:18:59] 2025-10-11 18:18:27,578 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 14:18:59] 2025-10-11 18:18:27,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:18:59] 2025-10-11 18:18:27,604 | INFO     | job 6838119545 has completed (purged errors)
[2025-10-11 14:18:59] 2025-10-11 18:18:27,604 | INFO     | overall cleanup function is called
[2025-10-11 14:18:59] 2025-10-11 18:18:28,612 | INFO     | --- collectZombieJob: --- 10, [6768]
[2025-10-11 14:18:59] 2025-10-11 18:18:28,612 | INFO     | zombie collector waiting for pid 6768
[2025-10-11 14:18:59] 2025-10-11 18:18:28,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:18:59] 2025-10-11 18:18:28,613 | INFO     | collected zombie processes
[2025-10-11 14:18:59] 2025-10-11 18:18:28,613 | INFO     | will attempt to kill all subprocesses of pid=6768
[2025-10-11 14:18:59] 2025-10-11 18:18:28,703 | INFO     | process IDs to be killed: [6768] (in reverse order)
[2025-10-11 14:18:59] 2025-10-11 18:18:28,754 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:18:59] 2025-10-11 18:18:28,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:18:59] 2025-10-11 18:18:28,758 | INFO     | did not find any defunct processes belonging to 6768
[2025-10-11 14:18:59] 2025-10-11 18:18:28,761 | INFO     | did not find any defunct processes belonging to 6768
[2025-10-11 14:18:59] 2025-10-11 18:18:28,761 | INFO     | ready for new job
[2025-10-11 14:18:59] 2025-10-11 18:18:28,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:18:59] 2025-10-11 18:18:28,762 | INFO     | ***************************************
[2025-10-11 14:18:59] 2025-10-11 18:18:28,762 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:18:59] 2025-10-11 18:18:28,762 | INFO     | ***************************************
[2025-10-11 14:18:59] 2025-10-11 18:18:28,762 | INFO     | 
[2025-10-11 14:18:59] 2025-10-11 18:18:28,763 | INFO     | architecture information:
[2025-10-11 14:18:59] 2025-10-11 18:18:28,763 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:18:59] 2025-10-11 18:18:28,778 | INFO     | cat /etc/os-release:
[2025-10-11 14:18:59] NAME="CentOS Linux"
[2025-10-11 14:18:59] VERSION="7 (Core)"
[2025-10-11 14:18:59] ID="centos"
[2025-10-11 14:18:59] ID_LIKE="rhel fedora"
[2025-10-11 14:18:59] VERSION_ID="7"
[2025-10-11 14:18:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:18:59] ANSI_COLOR="0;31"
[2025-10-11 14:18:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:18:59] HOME_URL="https://www.centos.org/"
[2025-10-11 14:18:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:18:59] 
[2025-10-11 14:18:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:18:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:18:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:18:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:18:59] 
[2025-10-11 14:18:59] 2025-10-11 18:18:28,778 | INFO     | ***************************************
[2025-10-11 14:18:59] 2025-10-11 18:18:29,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 14:18:59] 2025-10-11 18:18:29,297 | INFO     | sufficient remaining disk space (29366419456 B)
[2025-10-11 14:18:59] 2025-10-11 18:18:29,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:18:59] 2025-10-11 18:18:29,298 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:18:59] 2025-10-11 18:18:29,298 | INFO     | update_server=False
[2025-10-11 14:18:59] 2025-10-11 18:18:29,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:18:59] 2025-10-11 18:18:29,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:18:59] 2025-10-11 18:18:29,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:18:59] 2025-10-11 18:18:29,564 | INFO     | aborting loop
[2025-10-11 14:18:59] 2025-10-11 18:18:29,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:18:59] 2025-10-11 18:18:30,267 | INFO     | all job control threads have been joined
[2025-10-11 14:18:59] 2025-10-11 18:18:30,302 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:30,304 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:30,358 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:30,373 | INFO     | all data control threads have been joined
[2025-10-11 14:18:59] 2025-10-11 18:18:30,569 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:30,584 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:30,706 | INFO     | all payload control threads have been joined
[2025-10-11 14:18:59] 2025-10-11 18:18:30,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:18:59] 2025-10-11 18:18:30,789 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,272 | INFO     | [job] control thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,341 | INFO     | [job] validate thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,374 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,378 | INFO     | [data] control thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,712 | INFO     | [payload] control thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:31,727 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:32,784 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:33,970 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:18:59] 2025-10-11 18:18:45,915 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:18:59] 2025-10-11 18:18:47,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140337137342272)>', '<ExcThread(monitor, started 140336538035968)>']
[2025-10-11 14:18:59] 2025-10-11 18:18:52,270 | INFO     | all workflow threads have been joined
[2025-10-11 14:18:59] 2025-10-11 18:18:52,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:18:59] 2025-10-11 18:18:52,270 | INFO     | traces error code: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:52,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:18:59] 2025-10-11 18:18:59,553 | INFO     | PID=32594 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 14:18:59] 2025-10-11 18:18:59,554 | INFO     | [monitor] control thread has ended
[2025-10-11 14:18:59] 2025-10-11 18:18:59,637 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:18:59] 2025-10-11 18:18:59,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:18:59] 2025-10-11 18:18:59,645 [wrapper] pilotpid: 32594
[2025-10-11 14:18:59] 2025-10-11 18:18:59,648 [wrapper] Pilot exit status: 0
[2025-10-11 14:18:59] 2025-10-11 18:18:59,664 [wrapper] pandaids: 6838119545
[2025-10-11 14:18:59] 2025-10-11 18:18:59,704 [wrapper] cleanup supervisor_pilot 12971 32595
[2025-10-11 14:18:59] 2025-10-11 18:18:59,708 [wrapper] Test setup, not cleaning
[2025-10-11 14:18:59] 2025-10-11 18:18:59,712 [wrapper] apfmon messages muted
[2025-10-11 14:18:59] 2025-10-11 18:18:59,716 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:18:59] 2025-10-11 18:18:59,720 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:18:59]  *** Error codes and diagnostics ***
[2025-10-11 14:18:59]     "exeErrorCode": 0,
[2025-10-11 14:18:59]     "exeErrorDiag": "",
[2025-10-11 14:18:59]     "pilotErrorCode": 0,
[2025-10-11 14:18:59]     "pilotErrorDiag": "",
[2025-10-11 14:18:59]  *** Listing of results directory ***
[2025-10-11 14:18:59] total 408492
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 14:18:59] -rwx------ 1 boincer umatlas     36292 Oct 11 02:44 runpilot2-wrapper.sh
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 02:44 queuedata.json
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas       100 Oct 11 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:18:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 13:06 run_atlas
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas       105 Oct 11 13:06 job.xml
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas 223116866 Oct 11 13:06 EVNT.46676267._002126.pool.root.1
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 13:06 input.tar.gz
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:06 start_atlas.sh
[2025-10-11 14:18:59] drwxrwx--x 2 boincer umatlas      4096 Oct 11 13:06 shared
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas         0 Oct 11 13:06 boinc_lockfile
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 13:06 pandaJob.out
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas    975512 Oct 11 13:06 agis_schedconf.cvmfs.json
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas   1560580 Oct 11 13:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:18:59] drwx------ 5 boincer umatlas      4096 Oct 11 13:06 pilot3
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 14:10 init_data.xml
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas 189284690 Oct 11 14:17 HITS.46676269._052895.pool.root.1
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas       530 Oct 11 14:18 boinc_task_state.xml
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas      1049 Oct 11 14:18 memory_monitor_summary.json
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas    370084 Oct 11 14:18 log.46676269._052895.job.log.tgz.1
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas      7849 Oct 11 14:18 heartbeat.json
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 14:18 boinc_mmap_file
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas        27 Oct 11 14:18 wrapper_checkpoint.txt
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas       815 Oct 11 14:18 pilotlog.txt
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas        95 Oct 11 14:18 pilot_heartbeat.json
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas    627325 Oct 11 14:18 log.46676269._052895.job.log.1
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas       357 Oct 11 14:18 output.list
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas       620 Oct 11 14:18 runtime_log
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas   1013760 Oct 11 14:18 result.tar.gz
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas       658 Oct 11 14:18 xzOODmCWiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0efNDmhpJRUm.diag
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas      8700 Oct 11 14:18 runtime_log.err
[2025-10-11 14:18:59] -rw-r--r-- 1 boincer umatlas     22256 Oct 11 14:18 stderr.txt
[2025-10-11 14:18:59] HITS file was successfully produced:
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas 189284690 Oct 11 14:17 shared/HITS.pool.root.1
[2025-10-11 14:18:59]  *** Contents of shared directory: ***
[2025-10-11 14:18:59] total 404312
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas 223116866 Oct 11 13:06 ATLAS.root_0
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 13:06 input.tar.gz
[2025-10-11 14:18:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:06 start_atlas.sh
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas 189284690 Oct 11 14:17 HITS.pool.root.1
[2025-10-11 14:18:59] -rw------- 1 boincer umatlas   1013760 Oct 11 14:18 result.tar.gz
14:19:01 (28925): run_atlas exited; CPU time 45554.360188
14:19:01 (28925): called boinc_finish(0)

</stderr_txt>
]]>

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