Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:13 (31377): wrapper (7.7.26015): starting
13:19:13 (31377): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:19:13] Arguments: --nthreads 8
[2025-10-11 13:19:13] Threads: 8
[2025-10-11 13:19:13] Checking for CVMFS
[2025-10-11 13:19:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:19:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:19:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:19:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:19:14] 2.11.2.0 1072 51705 119820 151591 0 56 9651422 18432001 1833 130560 0 45488406 99.971 2349412 39503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 13:19:14] CVMFS is ok
[2025-10-11 13:19:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:19:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:19:14] Further information can be found at the LHC@home message board.
[2025-10-11 13:19:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:19:14] Checking for apptainer binary...
[2025-10-11 13:19:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:19:14] Running /usr/bin/apptainer --version
[2025-10-11 13:19:14] apptainer version 1.3.2-1.el7
[2025-10-11 13:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:19:15] c-206-15.aglt2.org
[2025-10-11 13:19:15] apptainer works
[2025-10-11 13:19:15] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:19:15] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:19:15] Starting ATLAS job with PandaID=6838293299
[2025-10-11 13:19:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:20:03 (31377): BOINC client no longer exists - exiting
14:20:03 (31377): timer handler: client dead, exiting
14:31:29 (8408): wrapper (7.7.26015): starting
14:31:29 (8408): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:31:29] Arguments: --nthreads 8
[2025-10-11 14:31:29] Threads: 8
[2025-10-11 14:31:29] This job has been restarted, cleaning up previous attempt
[2025-10-11 14:31:29] Checking for CVMFS
[2025-10-11 14:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:31:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:31:30] 2.11.2.0 3643 7 23312 151593 0 1 9658532 18432001 1 130560 0 31 100.000 1 90 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:31:30] CVMFS is ok
[2025-10-11 14:31:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:31:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:31:30] Further information can be found at the LHC@home message board.
[2025-10-11 14:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:31:30] Checking for apptainer binary...
[2025-10-11 14:31:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:31:30] Running /usr/bin/apptainer --version
[2025-10-11 14:31:30] apptainer version 1.3.2-1.el7
[2025-10-11 14:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:31:31] c-206-15.aglt2.org
[2025-10-11 14:31:31] apptainer works
[2025-10-11 14:31:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:31:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:31:31] Starting ATLAS job with PandaID=6838293299
[2025-10-11 14:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:43:08]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:43:08] 2025-10-11 21:42:00,475 | INFO     | -- intersect: -27788516433.000305
[2025-10-11 17:43:08] 2025-10-11 21:42:00,476 | INFO     | intersect: -27788516433.000305
[2025-10-11 17:43:08] 2025-10-11 21:42:00,476 | INFO     | chi2: 1.4702124697909404
[2025-10-11 17:43:08] 2025-10-11 21:42:00,476 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 17:43:08] 2025-10-11 21:42:00,477 | INFO     | sum of deviations: 30807166049.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,477 | INFO     | mean x: 1760213050.5
[2025-10-11 17:43:08] 2025-10-11 21:42:00,477 | INFO     | mean y: 2464764.967032967
[2025-10-11 17:43:08] 2025-10-11 21:42:00,477 | INFO     | -- intersect: -29006852610.520035
[2025-10-11 17:43:08] 2025-10-11 21:42:00,477 | INFO     | intersect: -29006852610.520035
[2025-10-11 17:43:08] 2025-10-11 21:42:00,478 | INFO     | chi2: 1.4710351309222152
[2025-10-11 17:43:08] 2025-10-11 21:42:00,478 | INFO     | current chi2=1.4710351309222152 (change=-0.05595525464368394 %)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,478 | INFO     | right removable region: 181
[2025-10-11 17:43:08] 2025-10-11 21:42:00,478 | INFO     | sum of square deviations: 1869302025.5
[2025-10-11 17:43:08] 2025-10-11 21:42:00,479 | INFO     | sum of deviations: 3871130607.499999
[2025-10-11 17:43:08] 2025-10-11 21:42:00,479 | INFO     | mean x: 1760213355.5
[2025-10-11 17:43:08] 2025-10-11 21:42:00,479 | INFO     | mean y: 2492726.7527472526
[2025-10-11 17:43:08] 2025-10-11 21:42:00,479 | INFO     | -- intersect: -3642726560.046943
[2025-10-11 17:43:08] 2025-10-11 21:42:00,479 | INFO     | intersect: -3642726560.046943
[2025-10-11 17:43:08] 2025-10-11 21:42:00,480 | INFO     | chi2: 0.09578646499456854
[2025-10-11 17:43:08] 2025-10-11 21:42:00,480 | INFO     | current chi2=0.09578646499456854 (change=93.48485562714693 %)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,480 | INFO     | sum of square deviations: 1719429448.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,481 | INFO     | sum of deviations: -3917042654.0000014
[2025-10-11 17:43:08] 2025-10-11 21:42:00,481 | INFO     | mean x: 1760213508.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,481 | INFO     | mean y: 2500652.694915254
[2025-10-11 17:43:08] 2025-10-11 21:42:00,481 | INFO     | -- intersect: 4012453721.140311
[2025-10-11 17:43:08] 2025-10-11 21:42:00,481 | INFO     | intersect: 4012453721.140311
[2025-10-11 17:43:08] 2025-10-11 21:42:00,482 | INFO     | chi2: 0.02929654373604185
[2025-10-11 17:43:08] 2025-10-11 21:42:00,482 | INFO     | current chi2=0.02929654373604185 (change=69.41473543500841 %)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,482 | INFO     | sum of square deviations: 1577789583.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,483 | INFO     | sum of deviations: -5539878053.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,483 | INFO     | mean x: 1760213660.5
[2025-10-11 17:43:08] 2025-10-11 21:42:00,483 | INFO     | mean y: 2502359.6279069767
[2025-10-11 17:43:08] 2025-10-11 21:42:00,483 | INFO     | -- intersect: 6182901274.325737
[2025-10-11 17:43:08] 2025-10-11 21:42:00,483 | INFO     | intersect: 6182901274.325737
[2025-10-11 17:43:08] 2025-10-11 21:42:00,484 | INFO     | chi2: 0.014488862372178102
[2025-10-11 17:43:08] 2025-10-11 21:42:00,484 | INFO     | current chi2=0.014488862372178102 (change=50.54412389829695 %)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,484 | INFO     | sum of square deviations: 1444149868.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,485 | INFO     | sum of deviations: -4669989199.999998
[2025-10-11 17:43:08] 2025-10-11 21:42:00,485 | INFO     | mean x: 1760213813.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,485 | INFO     | mean y: 2501364.724550898
[2025-10-11 17:43:08] 2025-10-11 21:42:00,485 | INFO     | -- intersect: 5694555685.779834
[2025-10-11 17:43:08] 2025-10-11 21:42:00,485 | INFO     | intersect: 5694555685.779834
[2025-10-11 17:43:08] 2025-10-11 21:42:00,486 | INFO     | chi2: 0.014274588418050954
[2025-10-11 17:43:08] 2025-10-11 21:42:00,486 | INFO     | current chi2=0.014274588418050954 (change=1.4788873592905578 %)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,486 | INFO     | left removable region: 40
[2025-10-11 17:43:08] 2025-10-11 21:42:00,486 | INFO     | sum of square deviations: 869188390.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | sum of deviations: 696530268.9999998
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | mean x: 1760214240.0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | mean y: 2493063.9219858157
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | -- intersect: -1408067077.2285764
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | intersect: -1408067077.2285764
[2025-10-11 17:43:08] 2025-10-11 21:42:00,487 | INFO     | chi2: 0.004786702270856404
[2025-10-11 17:43:08] 2025-10-11 21:42:00,488 | INFO     | -- intersect: -1408067077.2285764
[2025-10-11 17:43:08] 2025-10-11 21:42:00,488 | INFO     | current memory leak: 0.80 B/s (using 141 data points, chi2=0.00)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,488 | INFO     | could have reported an average CPU frequency of 2268 MHz (10 samples)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | ..............................
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . Timing measurements:
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . get job = 0 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . initial setup = 1 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . payload setup = 6 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . stage-in = 0 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . payload execution = 11382 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,489 | INFO     | . stage-out = 1 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,490 | INFO     | . log creation = 0 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,490 | INFO     | ..............................
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | 
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | job summary report
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | --------------------------------------------------
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | PanDA job id: 6838293299
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | task id: 46676269
[2025-10-11 17:43:08] 2025-10-11 21:42:00,575 | INFO     | errors: (none)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | pilot state: finished 
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | transexitcode: 0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | exeerrorcode: 0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | exeerrordiag: 
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | exitcode: 0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | exitmsg: OK
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | cpuconsumptiontime: 84132 s
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | nevents: 400
[2025-10-11 17:43:08] 2025-10-11 21:42:00,576 | INFO     | neventsw: 0
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | pid: 6419
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | pgrp: 6419
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | corecount: 8
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | event service: False
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 11392: 2378417, 11393: 2378416, 11395: 2387598, 11398: 2387654, 11402: 2387848}
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | --------------------------------------------------
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | 
[2025-10-11 17:43:08] 2025-10-11 21:42:00,577 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 17:43:08] 2025-10-11 21:42:00,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | job 6838293299 has completed (purged errors)
[2025-10-11 17:43:08] 2025-10-11 21:42:00,601 | INFO     | overall cleanup function is called
[2025-10-11 17:43:08] 2025-10-11 21:42:01,609 | INFO     | --- collectZombieJob: --- 10, [6419]
[2025-10-11 17:43:08] 2025-10-11 21:42:01,609 | INFO     | zombie collector waiting for pid 6419
[2025-10-11 17:43:08] 2025-10-11 21:42:01,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:43:08] 2025-10-11 21:42:01,609 | INFO     | collected zombie processes
[2025-10-11 17:43:08] 2025-10-11 21:42:01,609 | INFO     | will attempt to kill all subprocesses of pid=6419
[2025-10-11 17:43:08] 2025-10-11 21:42:01,719 | INFO     | process IDs to be killed: [6419] (in reverse order)
[2025-10-11 17:43:08] 2025-10-11 21:42:01,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:43:08] 2025-10-11 21:42:01,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:43:08] 2025-10-11 21:42:01,833 | INFO     | did not find any defunct processes belonging to 6419
[2025-10-11 17:43:08] 2025-10-11 21:42:01,836 | INFO     | did not find any defunct processes belonging to 6419
[2025-10-11 17:43:08] 2025-10-11 21:42:01,836 | INFO     | ready for new job
[2025-10-11 17:43:08] 2025-10-11 21:42:01,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:43:08] 2025-10-11 21:42:01,838 | INFO     | ***************************************
[2025-10-11 17:43:08] 2025-10-11 21:42:01,838 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 17:43:08] 2025-10-11 21:42:01,838 | INFO     | ***************************************
[2025-10-11 17:43:08] 2025-10-11 21:42:01,838 | INFO     | 
[2025-10-11 17:43:08] 2025-10-11 21:42:01,839 | INFO     | architecture information:
[2025-10-11 17:43:08] 2025-10-11 21:42:01,840 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:43:08] 2025-10-11 21:42:01,852 | INFO     | cat /etc/os-release:
[2025-10-11 17:43:08] NAME="CentOS Linux"
[2025-10-11 17:43:08] VERSION="7 (Core)"
[2025-10-11 17:43:08] ID="centos"
[2025-10-11 17:43:08] ID_LIKE="rhel fedora"
[2025-10-11 17:43:08] VERSION_ID="7"
[2025-10-11 17:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:43:08] ANSI_COLOR="0;31"
[2025-10-11 17:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:43:08] HOME_URL="https://www.centos.org/"
[2025-10-11 17:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:43:08] 
[2025-10-11 17:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:43:08] 
[2025-10-11 17:43:08] 2025-10-11 21:42:01,852 | INFO     | ***************************************
[2025-10-11 17:43:08] 2025-10-11 21:42:02,355 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 17:43:08] 2025-10-11 21:42:02,368 | INFO     | sufficient remaining disk space (27627880448 B)
[2025-10-11 17:43:08] 2025-10-11 21:42:02,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:43:08] 2025-10-11 21:42:02,368 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:43:08] 2025-10-11 21:42:02,368 | INFO     | update_server=False
[2025-10-11 17:43:08] 2025-10-11 21:42:02,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:43:08] 2025-10-11 21:42:02,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:43:08] 2025-10-11 21:42:02,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:43:08] 2025-10-11 21:42:02,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:43:08] 2025-10-11 21:42:02,369 | INFO     | aborting loop
[2025-10-11 17:43:08] 2025-10-11 21:42:02,603 | INFO     | all payload control threads have been joined
[2025-10-11 17:43:08] 2025-10-11 21:42:02,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:43:08] 2025-10-11 21:42:02,844 | INFO     | all job control threads have been joined
[2025-10-11 17:43:08] 2025-10-11 21:42:03,133 | INFO     | all data control threads have been joined
[2025-10-11 17:43:08] 2025-10-11 21:42:03,372 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,375 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,375 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,453 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,608 | INFO     | [payload] control thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,680 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,845 | INFO     | [job] control thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,924 | INFO     | [job] validate thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,951 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:03,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:04,135 | INFO     | [data] control thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:04,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:04,218 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:04,374 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:04,446 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:06,691 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:43:08] 2025-10-11 21:42:33,064 | INFO     | PID=19481 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 17:43:08] 2025-10-11 21:42:33,064 | INFO     | .. there are 3 such processes running
[2025-10-11 17:43:08] 2025-10-11 21:42:33,064 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:43:08] 2025-10-11 21:42:33,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:43:08] 2025-10-11 21:42:33,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:43:08] 2025-10-11 21:43:01,819 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:43:08] 2025-10-11 21:43:03,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027611170624)>', '<ExcThread(monitor, started 140026738374400)>']
[2025-10-11 17:43:08] 2025-10-11 21:43:04,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:43:08] 2025-10-11 21:43:04,207 | INFO     | [monitor] control thread has ended
[2025-10-11 17:43:08] 2025-10-11 21:43:08,435 | INFO     | all workflow threads have been joined
[2025-10-11 17:43:08] 2025-10-11 21:43:08,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:43:08] 2025-10-11 21:43:08,435 | INFO     | traces error code: 0
[2025-10-11 17:43:08] 2025-10-11 21:43:08,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:43:08] 2025-10-11 21:43:08,522 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:43:08] 2025-10-11 21:43:08,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:43:08] 2025-10-11 21:43:08,526 [wrapper] pilotpid: 19481
[2025-10-11 17:43:08] 2025-10-11 21:43:08,528 [wrapper] Pilot exit status: 0
[2025-10-11 17:43:08] 2025-10-11 21:43:08,537 [wrapper] pandaids: 6838293299 6838293299
[2025-10-11 17:43:08] 2025-10-11 21:43:08,567 [wrapper] cleanup supervisor_pilot 28199 19482
[2025-10-11 17:43:08] 2025-10-11 21:43:08,569 [wrapper] Test setup, not cleaning
[2025-10-11 17:43:08] 2025-10-11 21:43:08,573 [wrapper] apfmon messages muted
[2025-10-11 17:43:08] 2025-10-11 21:43:08,576 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:43:08] 2025-10-11 21:43:08,578 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:43:08]  *** Error codes and diagnostics ***
[2025-10-11 17:43:08]     "exeErrorCode": 0,
[2025-10-11 17:43:08]     "exeErrorDiag": "",
[2025-10-11 17:43:08]     "pilotErrorCode": 0,
[2025-10-11 17:43:08]     "pilotErrorDiag": "",
[2025-10-11 17:43:08]  *** Listing of results directory ***
[2025-10-11 17:43:08] total 635972
[2025-10-11 17:43:08] drwx------ 4 boincer umatlas      4096 Jul 31 08:57 pilot3
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 05:20 queuedata.json
[2025-10-11 17:43:08] -rwx------ 1 boincer umatlas     36292 Oct 11 05:21 runpilot2-wrapper.sh
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas       100 Oct 11 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:43:08] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 13:19 run_atlas
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas       105 Oct 11 13:19 job.xml
[2025-10-11 17:43:08] -rw-r--r-- 3 boincer umatlas 224191996 Oct 11 13:19 EVNT.46676267._002215.pool.root.1
[2025-10-11 17:43:08] -rw-r--r-- 3 boincer umatlas 224191996 Oct 11 13:19 ATLAS.root_0
[2025-10-11 17:43:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:19 start_atlas.sh
[2025-10-11 17:43:08] drwxrwx--x 2 boincer umatlas      4096 Oct 11 13:19 shared
[2025-10-11 17:43:08] -rw-r--r-- 2 boincer umatlas    576709 Oct 11 13:19 input.tar.gz
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas         0 Oct 11 13:19 boinc_lockfile
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 14:31 pandaJob.out
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas    975520 Oct 11 14:31 agis_schedconf.cvmfs.json
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 17:38 init_data.xml
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas 194874400 Oct 11 17:41 HITS.46676269._055247.pool.root.1
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas       532 Oct 11 17:41 boinc_task_state.xml
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas      1055 Oct 11 17:41 memory_monitor_summary.json
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas        96 Oct 11 17:41 pilot_heartbeat.json
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas   1560580 Oct 11 17:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas    432824 Oct 11 17:41 log.46676269._055247.job.log.tgz.1
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas      7859 Oct 11 17:42 heartbeat.json
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas        29 Oct 11 17:42 wrapper_checkpoint.txt
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 17:42 boinc_mmap_file
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas      4821 Oct 11 17:43 pilotlog.txt
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas   1595028 Oct 11 17:43 log.46676269._055247.job.log.1
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas       357 Oct 11 17:43 output.list
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas       620 Oct 11 17:43 runtime_log
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas   2048000 Oct 11 17:43 result.tar.gz
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas      8789 Oct 11 17:43 runtime_log.err
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas       786 Oct 11 17:43 9NmLDm5xkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp2fNDm8dkQgn.diag
[2025-10-11 17:43:08] -rw-r--r-- 1 boincer umatlas     23139 Oct 11 17:43 stderr.txt
[2025-10-11 17:43:08] HITS file was successfully produced:
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas 194874400 Oct 11 17:41 shared/HITS.pool.root.1
[2025-10-11 17:43:08]  *** Contents of shared directory: ***
[2025-10-11 17:43:08] total 411836
[2025-10-11 17:43:08] -rw-r--r-- 3 boincer umatlas 224191996 Oct 11 13:19 ATLAS.root_0
[2025-10-11 17:43:08] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:19 start_atlas.sh
[2025-10-11 17:43:08] -rw-r--r-- 2 boincer umatlas    576709 Oct 11 13:19 input.tar.gz
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas 194874400 Oct 11 17:41 HITS.pool.root.1
[2025-10-11 17:43:08] -rw------- 1 boincer umatlas   2048000 Oct 11 17:43 result.tar.gz
17:43:10 (8408): run_atlas exited; CPU time 84261.514998
17:43:10 (8408): called boinc_finish(0)

</stderr_txt>
]]>

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