Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
16:51:26 (3802849): wrapper (7.7.26015): starting
16:51:26 (3802849): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 16:51:26] Arguments: --nthreads 12
[2025-10-13 16:51:26] Threads: 12
[2025-10-13 16:51:26] Checking for CVMFS
[2025-10-13 16:51:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:51:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:51:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:51:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:51:26] 2.13.2.0 13441 14545 60052 151650 3 57 5839516 6144001 0 130560 0 12826908 99.992 448547 61 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 16:51:26] CVMFS is ok
[2025-10-13 16:51:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:51:26] Checking for apptainer binary...
[2025-10-13 16:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:51:26] Running /usr/bin/apptainer --version
[2025-10-13 16:51:26] apptainer version 1.4.3
[2025-10-13 16:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:51:26] MINIPC-PN51-E1
[2025-10-13 16:51:26] apptainer works
[2025-10-13 16:51:26] Set ATHENA_PROC_NUMBER=12
[2025-10-13 16:51:26] Set ATHENA_CORE_NUMBER=12
[2025-10-13 16:51:27] Starting ATLAS job with PandaID=6838366464
[2025-10-13 16:51:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:05:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:05:07]  scope=mc23_13p6TeV
[2025-10-13 18:05:07]  status=None
[2025-10-13 18:05:07]  status_code=0
[2025-10-13 18:05:07]  storage_token=
[2025-10-13 18:05:07]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6838366464/log.46676269._057347.job.log.tgz.1
[2025-10-13 18:05:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/0f/log.46676269._057347.job.log.tgz.1
[2025-10-13 18:05:07]  workdir=None
[2025-10-13 18:05:07] ]
[2025-10-13 18:05:07] 2025-10-13 07:04:26,051 | INFO     | transferring file log.46676269._057347.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838366464/log.46676269._057347.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 18:05:07] 2025-10-13 07:04:26,051 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838366464/log.46676269._057347.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._057347.job
[2025-10-13 18:05:07] 2025-10-13 07:04:26,067 | INFO     | adding to output.list: log.46676269._057347.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/0f/log.46676269._057347.job.log.tg
[2025-10-13 18:05:07] 2025-10-13 07:04:26,068 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 18:05:07] 2025-10-13 07:04:26,068 | INFO     | summary of transferred files:
[2025-10-13 18:05:07] 2025-10-13 07:04:26,068 | INFO     |  -- lfn=log.46676269._057347.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 18:05:07] 2025-10-13 07:04:26,068 | INFO     | stage-out finished correctly
[2025-10-13 18:05:07] 2025-10-13 07:04:26,109 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 18:05:07] 2025-10-13 07:04:26,115 | INFO     | time since job start (4367s) is within the limit (172800.0s)
[2025-10-13 18:05:07] 2025-10-13 07:04:28,023 | INFO     | job 6838366464 has state=finished
[2025-10-13 18:05:07] 2025-10-13 07:04:28,023 | INFO     | preparing for final server update for job 6838366464 in state='finished'
[2025-10-13 18:05:07] 2025-10-13 07:04:28,024 | INFO     | this job has now completed (state=finished)
[2025-10-13 18:05:07] 2025-10-13 07:04:28,024 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 18:05:07] 2025-10-13 07:04:28,024 | INFO     | log transfer has been attempted: DONE
[2025-10-13 18:05:07] 2025-10-13 07:04:28,024 | INFO     | job 6838366464 has finished - writing final server update
[2025-10-13 18:05:07] 2025-10-13 07:04:28,024 | INFO     | total number of processed events: 400 (read)
[2025-10-13 18:05:07] 2025-10-13 07:04:28,025 | INFO     | executing command: lscpu
[2025-10-13 18:05:07] 2025-10-13 07:04:28,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 18:05:07] 2025-10-13 07:04:28,121 | INFO     | time since job start (4369s) is within the limit (172800.0s)
[2025-10-13 18:05:07] 2025-10-13 07:04:28,214 | INFO     | monitor loop #327: job 0:6838366464 is in state 'finished'
[2025-10-13 18:05:07] 2025-10-13 07:04:28,214 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:05:07] 2025-10-13 07:04:30,126 | INFO     | time since job start (4371s) is within the limit (172800.0s)
[2025-10-13 18:05:07] 2025-10-13 07:04:30,717 | INFO     | monitor loop #328: job 0:6838366464 is in state 'finished'
[2025-10-13 18:05:07] 2025-10-13 07:04:30,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:05:07] 2025-10-13 07:04:32,132 | INFO     | time since job start (4373s) is within the limit (172800.0s)
[2025-10-13 18:05:07] 2025-10-13 07:04:33,220 | INFO     | monitor loop #329: job 0:6838366464 is in state 'finished'
[2025-10-13 18:05:07] 2025-10-13 07:04:33,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 18:05:07] 2025-10-13 07:04:34,040 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2541.1401875
[2025-10-13 18:05:07] 2025-10-13 07:04:34,042 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838366464/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,042 | INFO     | extracted standard info from prmon json
[2025-10-13 18:05:07] 2025-10-13 07:04:34,042 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:05:07] 2025-10-13 07:04:34,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:05:07] 2025-10-13 07:04:34,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:05:07] 2025-10-13 07:04:34,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | sum of deviations: -9187124416.999998
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | mean x: 1760336980.0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | mean y: 2990813.123076923
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | -- intersect: 189961923236.75674
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | intersect: 189961923236.75674
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | chi2: 0.15377320074150713
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | -- intersect: 189961923236.75674
[2025-10-13 18:05:07] 2025-10-13 07:04:34,044 | INFO     | current memory leak: -107.91 B/s (using 65 data points, chi2=0.15)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | could have reported an average CPU frequency of 2981 MHz (6 samples)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | ..............................
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . Timing measurements:
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . get job = 0 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . initial setup = 5 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . payload setup = 4 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . stage-in = 0 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . payload execution = 4343 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . stage-out = 0 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | . log creation = 0 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,045 | INFO     | ..............................
[2025-10-13 18:05:07] 2025-10-13 07:04:34,137 | INFO     | time since job start (4375s) is within the limit (172800.0s)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,530 | INFO     | 
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | job summary report
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | --------------------------------------------------
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | PanDA job id: 6838366464
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | task id: 46676269
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | errors: (none)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | pilot state: finished 
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | transexitcode: 0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | exeerrorcode: 0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | exeerrordiag: 
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | exitcode: 0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | exitmsg: OK
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | cpuconsumptiontime: 46112 s
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | nevents: 400
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | neventsw: 0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | pid: 3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:34,531 | INFO     | pgrp: 3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | corecount: 12
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | event service: False
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | sizes: {0: 2348857, 3: 2349119, 10: 2349147, 4351: 2375338, 4352: 2384391, 4360: 2384529}
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | --------------------------------------------------
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | 
[2025-10-13 18:05:07] 2025-10-13 07:04:34,532 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 18:05:07] 2025-10-13 07:04:34,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | job 6838366464 has completed (purged errors)
[2025-10-13 18:05:07] 2025-10-13 07:04:34,557 | INFO     | overall cleanup function is called
[2025-10-13 18:05:07] 2025-10-13 07:04:35,565 | INFO     | --- collectZombieJob: --- 10, [3813515]
[2025-10-13 18:05:07] 2025-10-13 07:04:35,565 | INFO     | zombie collector waiting for pid 3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:35,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:05:07] 2025-10-13 07:04:35,566 | INFO     | collected zombie processes
[2025-10-13 18:05:07] 2025-10-13 07:04:35,566 | INFO     | will attempt to kill all subprocesses of pid=3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:35,637 | INFO     | process IDs to be killed: [3813515] (in reverse order)
[2025-10-13 18:05:07] 2025-10-13 07:04:35,693 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:05:07] 2025-10-13 07:04:35,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:05:07] 2025-10-13 07:04:35,696 | INFO     | did not find any defunct processes belonging to 3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:35,699 | INFO     | did not find any defunct processes belonging to 3813515
[2025-10-13 18:05:07] 2025-10-13 07:04:35,700 | INFO     | ready for new job
[2025-10-13 18:05:07] 2025-10-13 07:04:35,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:05:07] 2025-10-13 07:04:35,701 | INFO     | ***************************************
[2025-10-13 18:05:07] 2025-10-13 07:04:35,701 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:05:07] 2025-10-13 07:04:35,701 | INFO     | ***************************************
[2025-10-13 18:05:07] 2025-10-13 07:04:35,701 | INFO     | 
[2025-10-13 18:05:07] 2025-10-13 07:04:35,702 | INFO     | architecture information:
[2025-10-13 18:05:07] 2025-10-13 07:04:35,703 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:05:07] 2025-10-13 07:04:35,721 | INFO     | cat /etc/os-release:
[2025-10-13 18:05:07] NAME="CentOS Linux"
[2025-10-13 18:05:07] VERSION="7 (Core)"
[2025-10-13 18:05:07] ID="centos"
[2025-10-13 18:05:07] ID_LIKE="rhel fedora"
[2025-10-13 18:05:07] VERSION_ID="7"
[2025-10-13 18:05:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:05:07] ANSI_COLOR="0;31"
[2025-10-13 18:05:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:05:07] HOME_URL="https://www.centos.org/"
[2025-10-13 18:05:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:05:07] 
[2025-10-13 18:05:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:05:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:05:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:05:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:05:07] 
[2025-10-13 18:05:07] 2025-10-13 07:04:35,722 | INFO     | ***************************************
[2025-10-13 18:05:07] 2025-10-13 07:04:36,223 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 18:05:07] 2025-10-13 07:04:36,240 | INFO     | sufficient remaining disk space (404169424896 B)
[2025-10-13 18:05:07] 2025-10-13 07:04:36,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:05:07] 2025-10-13 07:04:36,240 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:05:07] 2025-10-13 07:04:36,241 | INFO     | update_server=False
[2025-10-13 18:05:07] 2025-10-13 07:04:36,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:05:07] 2025-10-13 07:04:36,321 | INFO     | all job control threads have been joined
[2025-10-13 18:05:07] 2025-10-13 07:04:36,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:05:07] 2025-10-13 07:04:36,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:05:07] 2025-10-13 07:04:36,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:05:07] 2025-10-13 07:04:36,728 | INFO     | aborting loop
[2025-10-13 18:05:07] 2025-10-13 07:04:36,942 | INFO     | all data control threads have been joined
[2025-10-13 18:05:07] 2025-10-13 07:04:37,246 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,326 | INFO     | [job] control thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,395 | INFO     | all payload control threads have been joined
[2025-10-13 18:05:07] 2025-10-13 07:04:37,521 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,592 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,733 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,862 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:37,948 | INFO     | [data] control thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,166 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,401 | INFO     | [payload] control thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,515 | INFO     | [job] validate thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,627 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,647 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:38,663 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:39,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:05:07] 2025-10-13 07:04:40,112 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:40,665 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:45,819 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:05:07] 2025-10-13 07:04:46,829 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:05:07] 2025-10-13 07:04:47,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:05:07] 2025-10-13 07:04:48,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139413452244800)>', '<ExcThread(monitor, started 139412641912576)>']
[2025-10-13 18:05:07] 2025-10-13 07:04:53,937 | INFO     | all workflow threads have been joined
[2025-10-13 18:05:07] 2025-10-13 07:04:53,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:05:07] 2025-10-13 07:04:53,937 | INFO     | traces error code: 0
[2025-10-13 18:05:07] 2025-10-13 07:04:53,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:05:07] 2025-10-13 07:05:07,350 | INFO     | PID=3806695 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:05:07] 2025-10-13 07:05:07,352 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:05:07] 2025-10-13 07:05:07,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:05:07] 2025-10-13 07:05:07,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:05:07] 2025-10-13 07:05:07,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:05:07] 2025-10-13 07:05:07,352 | INFO     | [monitor] control thread has ended
[2025-10-13 18:05:07] 2025-10-13 07:05:07,501 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:05:07] 2025-10-13 07:05:07,504 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:05:07] 2025-10-13 07:05:07,509 [wrapper] pilotpid: 3806695
[2025-10-13 18:05:07] 2025-10-13 07:05:07,512 [wrapper] Pilot exit status: 0
[2025-10-13 18:05:07] 2025-10-13 07:05:07,526 [wrapper] pandaids: 6838366464
[2025-10-13 18:05:07] 2025-10-13 07:05:07,564 [wrapper] cleanup supervisor_pilot 3864476 3806696
[2025-10-13 18:05:07] 2025-10-13 07:05:07,567 [wrapper] Test setup, not cleaning
[2025-10-13 18:05:07] 2025-10-13 07:05:07,570 [wrapper] apfmon messages muted
[2025-10-13 18:05:07] 2025-10-13 07:05:07,574 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:05:07] 2025-10-13 07:05:07,577 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:05:07]  *** Error codes and diagnostics ***
[2025-10-13 18:05:07]     "exeErrorCode": 0,
[2025-10-13 18:05:07]     "exeErrorDiag": "",
[2025-10-13 18:05:07]     "pilotErrorCode": 0,
[2025-10-13 18:05:07]     "pilotErrorDiag": "",
[2025-10-13 18:05:07]  *** Listing of results directory ***
[2025-10-13 18:05:07] total 408772
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:21 pilot3.tar.gz
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:56 queuedata.json
[2025-10-13 18:05:07] -rwx------ 1 boinc boinc     36292 Oct 11 22:56 runpilot2-wrapper.sh
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc       100 Oct 13 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:05:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 16:51 run_atlas
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc       105 Oct 13 16:51 job.xml
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc 220725675 Oct 13 16:51 EVNT.46676267._002302.pool.root.1
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc    569681 Oct 13 16:51 input.tar.gz
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:51 start_atlas.sh
[2025-10-13 18:05:07] drwxrwx--x 2 boinc boinc      4096 Oct 13 16:51 shared
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:51 boinc_setup_complete
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc      9348 Oct 13 16:51 init_data.xml
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc         0 Oct 13 16:51 boinc_lockfile
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc      2550 Oct 13 16:51 pandaJob.out
[2025-10-13 18:05:07] -rw------- 1 boinc boinc    973230 Oct 13 16:51 agis_schedconf.cvmfs.json
[2025-10-13 18:05:07] -rw------- 1 boinc boinc   1560580 Oct 13 16:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:05:07] drwx------ 5 boinc boinc      4096 Oct 13 16:51 pilot3
[2025-10-13 18:05:07] -rw------- 1 boinc boinc 191904457 Oct 13 18:04 HITS.46676269._057347.pool.root.1
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc       529 Oct 13 18:04 boinc_task_state.xml
[2025-10-13 18:05:07] -rw------- 1 boinc boinc      1025 Oct 13 18:04 memory_monitor_summary.json
[2025-10-13 18:05:07] -rw------- 1 boinc boinc    385389 Oct 13 18:04 log.46676269._057347.job.log.tgz.1
[2025-10-13 18:05:07] -rw------- 1 boinc boinc      7794 Oct 13 18:04 heartbeat.json
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc      8192 Oct 13 18:04 boinc_mmap_file
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc        27 Oct 13 18:04 wrapper_checkpoint.txt
[2025-10-13 18:05:07] -rw------- 1 boinc boinc       747 Oct 13 18:05 pilotlog.txt
[2025-10-13 18:05:07] -rw------- 1 boinc boinc        95 Oct 13 18:05 pilot_heartbeat.json
[2025-10-13 18:05:07] -rw------- 1 boinc boinc    636754 Oct 13 18:05 log.46676269._057347.job.log.1
[2025-10-13 18:05:07] -rw------- 1 boinc boinc       357 Oct 13 18:05 output.list
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc       620 Oct 13 18:05 runtime_log
[2025-10-13 18:05:07] -rw------- 1 boinc boinc   1044480 Oct 13 18:05 result.tar.gz
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc      8703 Oct 13 18:05 runtime_log.err
[2025-10-13 18:05:07] -rw------- 1 boinc boinc       650 Oct 13 18:05 DAfLDm0NnR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1pRMDmt5PhMm.diag
[2025-10-13 18:05:07] -rw-r--r-- 1 boinc boinc     21596 Oct 13 18:05 stderr.txt
[2025-10-13 18:05:07] HITS file was successfully produced:
[2025-10-13 18:05:07] -rw------- 1 boinc boinc 191904457 Oct 13 18:04 shared/HITS.pool.root.1
[2025-10-13 18:05:07]  *** Contents of shared directory: ***
[2025-10-13 18:05:07] total 404568
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc 220725675 Oct 13 16:51 ATLAS.root_0
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc    569681 Oct 13 16:51 input.tar.gz
[2025-10-13 18:05:07] -rw-r--r-- 2 boinc boinc     15120 Oct 13 16:51 start_atlas.sh
[2025-10-13 18:05:07] -rw------- 1 boinc boinc 191904457 Oct 13 18:04 HITS.pool.root.1
[2025-10-13 18:05:07] -rw------- 1 boinc boinc   1044480 Oct 13 18:05 result.tar.gz
18:05:09 (3802849): run_atlas exited; CPU time 46080.444054
18:05:09 (3802849): called boinc_finish(0)

</stderr_txt>
]]>

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