Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:04:12 (3005217): wrapper (7.7.26015): starting
13:04:12 (3005217): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:04:12] Arguments: --nthreads 8
[2025-10-11 13:04:12] Threads: 8
[2025-10-11 13:04:12] Checking for CVMFS
[2025-10-11 13:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:04:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:04:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:04:15] 2.13.2.0 5414 4513 142668 151590 1 369 40044097 40960000 12680 16776704 0 7011791 99.692 4162490 37575 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 13:04:15] CVMFS is ok
[2025-10-11 13:04:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:04:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:04:15] Further information can be found at the LHC@home message board.
[2025-10-11 13:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:04:15] Checking for apptainer binary...
[2025-10-11 13:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:04:15] Running /usr/bin/apptainer --version
[2025-10-11 13:04:15] apptainer version 1.4.3-1.el9
[2025-10-11 13:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:04:15] c-210-33-3.aglt2.org
[2025-10-11 13:04:15] apptainer works
[2025-10-11 13:04:16] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:04:16] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:04:16] Starting ATLAS job with PandaID=6838182426
[2025-10-11 13:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:20:06 (3005217): BOINC client no longer exists - exiting
14:20:06 (3005217): timer handler: client dead, exiting
14:27:35 (3138794): wrapper (7.7.26015): starting
14:27:35 (3138794): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 14:27:36] Arguments: --nthreads 8
[2025-10-11 14:27:36] Threads: 8
[2025-10-11 14:27:36] This job has been restarted, cleaning up previous attempt
[2025-10-11 14:27:36] Checking for CVMFS
[2025-10-11 14:27:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:27:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:27:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:27:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:27:37] 2.13.2.0 5414 4596 141764 151593 1 319 40122602 40960001 10853 16776704 0 7150806 99.698 4166447 37571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 14:27:37] CVMFS is ok
[2025-10-11 14:27:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:27:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:27:37] Further information can be found at the LHC@home message board.
[2025-10-11 14:27:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:27:37] Checking for apptainer binary...
[2025-10-11 14:27:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:27:37] Running /usr/bin/apptainer --version
[2025-10-11 14:27:37] apptainer version 1.4.3-1.el9
[2025-10-11 14:27:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:27:38] c-210-33-3.aglt2.org
[2025-10-11 14:27:38] apptainer works
[2025-10-11 14:27:38] Set ATHENA_PROC_NUMBER=8
[2025-10-11 14:27:38] Set ATHENA_CORE_NUMBER=8
[2025-10-11 14:27:38] Starting ATLAS job with PandaID=6838182426
[2025-10-11 14:27:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:51:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:51:37] 2025-10-11 22:50:39,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:51:37] 2025-10-11 22:50:39,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:51:37] 2025-10-11 22:50:39,810 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:51:37] 2025-10-11 22:50:39,811 | INFO     | sum of square deviations: 5263425946.474736
[2025-10-11 18:51:37] 2025-10-11 22:50:39,812 | INFO     | sum of deviations: 28500582798.964985
[2025-10-11 18:51:37] 2025-10-11 22:50:39,813 | INFO     | mean x: 1760215155.7315176
[2025-10-11 18:51:37] 2025-10-11 22:50:39,813 | INFO     | mean y: 2520975.7821011674
[2025-10-11 18:51:37] 2025-10-11 22:50:39,813 | INFO     | -- intersect: -9528753578.107922
[2025-10-11 18:51:37] 2025-10-11 22:50:39,813 | INFO     | intersect: -9528753578.107922
[2025-10-11 18:51:37] 2025-10-11 22:50:39,813 | INFO     | chi2: 1.602873162127523
[2025-10-11 18:51:37] 2025-10-11 22:50:39,814 | INFO     | sum of square deviations: 4962212518.74603
[2025-10-11 18:51:37] 2025-10-11 22:50:39,815 | INFO     | sum of deviations: 27706839514.67462
[2025-10-11 18:51:37] 2025-10-11 22:50:39,815 | INFO     | mean x: 1760215003.2460318
[2025-10-11 18:51:37] 2025-10-11 22:50:39,815 | INFO     | mean y: 2520573.9246031744
[2025-10-11 18:51:37] 2025-10-11 22:50:39,815 | INFO     | -- intersect: -9825755506.960508
[2025-10-11 18:51:37] 2025-10-11 22:50:39,815 | INFO     | intersect: -9825755506.960508
[2025-10-11 18:51:37] 2025-10-11 22:50:39,816 | INFO     | chi2: 1.603528385680688
[2025-10-11 18:51:37] 2025-10-11 22:50:39,816 | INFO     | current chi2=1.603528385680688 (change=-0.04087806625293112 %)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,816 | INFO     | right removable region: 251
[2025-10-11 18:51:37] 2025-10-11 22:50:39,816 | INFO     | sum of square deviations: 4962097838.74603
[2025-10-11 18:51:37] 2025-10-11 22:50:39,818 | INFO     | sum of deviations: -14764497153.626978
[2025-10-11 18:51:37] 2025-10-11 22:50:39,818 | INFO     | mean x: 1760215308.2460318
[2025-10-11 18:51:37] 2025-10-11 22:50:39,818 | INFO     | mean y: 2542707.123015873
[2025-10-11 18:51:37] 2025-10-11 22:50:39,818 | INFO     | -- intersect: 5239983554.306465
[2025-10-11 18:51:37] 2025-10-11 22:50:39,818 | INFO     | intersect: 5239983554.306465
[2025-10-11 18:51:37] 2025-10-11 22:50:39,819 | INFO     | chi2: 0.06829971518924616
[2025-10-11 18:51:37] 2025-10-11 22:50:39,819 | INFO     | current chi2=0.06829971518924616 (change=95.73891953505598 %)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,819 | INFO     | sum of square deviations: 4672506131.4251
[2025-10-11 18:51:37] 2025-10-11 22:50:39,820 | INFO     | sum of deviations: -20348240185.35627
[2025-10-11 18:51:37] 2025-10-11 22:50:39,821 | INFO     | mean x: 1760215460.757085
[2025-10-11 18:51:37] 2025-10-11 22:50:39,821 | INFO     | mean y: 2545621.060728745
[2025-10-11 18:51:37] 2025-10-11 22:50:39,821 | INFO     | -- intersect: 7668086546.212722
[2025-10-11 18:51:37] 2025-10-11 22:50:39,821 | INFO     | intersect: 7668086546.212722
[2025-10-11 18:51:37] 2025-10-11 22:50:39,822 | INFO     | chi2: 0.031373272558737654
[2025-10-11 18:51:37] 2025-10-11 22:50:39,822 | INFO     | current chi2=0.031373272558737654 (change=54.06529518928741 %)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,822 | INFO     | sum of square deviations: 4394417835.074389
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | sum of deviations: -18424725382.446297
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | mean x: 1760215613.2644627
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | mean y: 2544564.4132231404
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | -- intersect: 7382700595.420915
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | intersect: 7382700595.420915
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | chi2: 0.031052091612464448
[2025-10-11 18:51:37] 2025-10-11 22:50:39,824 | INFO     | current chi2=0.031052091612464448 (change=1.0237406559098519 %)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,825 | INFO     | left removable region: 30
[2025-10-11 18:51:37] 2025-10-11 22:50:39,825 | INFO     | sum of square deviations: 3346868639.7647157
[2025-10-11 18:51:37] 2025-10-11 22:50:39,826 | INFO     | sum of deviations: -9753182938.999996
[2025-10-11 18:51:37] 2025-10-11 22:50:39,826 | INFO     | mean x: 1760215887.764706
[2025-10-11 18:51:37] 2025-10-11 22:50:39,826 | INFO     | mean y: 2539269.153846154
[2025-10-11 18:51:37] 2025-10-11 22:50:39,826 | INFO     | -- intersect: 5132022799.379983
[2025-10-11 18:51:37] 2025-10-11 22:50:39,826 | INFO     | intersect: 5132022799.379983
[2025-10-11 18:51:37] 2025-10-11 22:50:39,827 | INFO     | chi2: 0.023037037015565576
[2025-10-11 18:51:37] 2025-10-11 22:50:39,827 | INFO     | -- intersect: 5132022799.379983
[2025-10-11 18:51:37] 2025-10-11 22:50:39,827 | INFO     | current memory leak: -2.91 B/s (using 221 data points, chi2=0.02)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,827 | INFO     | could have reported an average CPU frequency of 2565 MHz (12 samples)
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | ..............................
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . Timing measurements:
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . get job = 0 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . initial setup = 1 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . payload setup = 19 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . stage-in = 0 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . payload execution = 15689 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . stage-out = 2 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | . log creation = 0 s
[2025-10-11 18:51:37] 2025-10-11 22:50:39,828 | INFO     | ..............................
[2025-10-11 18:51:37] 2025-10-11 22:50:40,121 | INFO     | time since job start (15758s) is within the limit (172800.0s)
[2025-10-11 18:51:37] 2025-10-11 22:50:40,239 | INFO     | 
[2025-10-11 18:51:37] 2025-10-11 22:50:40,239 | INFO     | job summary report
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | --------------------------------------------------
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | PanDA job id: 6838182426
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | task id: 46676269
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | errors: (none)
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | pilot state: finished 
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | transexitcode: 0
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | exeerrorcode: 0
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | exeerrordiag: 
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | exitcode: 0
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | exitmsg: OK
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | cpuconsumptiontime: 42963 s
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | nevents: 400
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | neventsw: 0
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | pid: 3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | pgrp: 3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | corecount: 8
[2025-10-11 18:51:37] 2025-10-11 22:50:40,240 | INFO     | event service: False
[2025-10-11 18:51:37] 2025-10-11 22:50:40,241 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 12: 2348913, 13: 2349203, 23: 2349259, 15711: 2381303, 15714: 2390301, 15717: 2390357, 15725: 2390551}
[2025-10-11 18:51:37] 2025-10-11 22:50:40,241 | INFO     | --------------------------------------------------
[2025-10-11 18:51:37] 2025-10-11 22:50:40,241 | INFO     | 
[2025-10-11 18:51:37] 2025-10-11 22:50:40,241 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | job 6838182426 has completed (purged errors)
[2025-10-11 18:51:37] 2025-10-11 22:50:40,264 | INFO     | overall cleanup function is called
[2025-10-11 18:51:37] 2025-10-11 22:50:41,273 | INFO     | --- collectZombieJob: --- 10, [3176945]
[2025-10-11 18:51:37] 2025-10-11 22:50:41,274 | INFO     | zombie collector waiting for pid 3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:41,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:51:37] 2025-10-11 22:50:41,274 | INFO     | collected zombie processes
[2025-10-11 18:51:37] 2025-10-11 22:50:41,274 | INFO     | will attempt to kill all subprocesses of pid=3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:41,482 | INFO     | process IDs to be killed: [3176945] (in reverse order)
[2025-10-11 18:51:37] 2025-10-11 22:50:41,565 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:51:37] 2025-10-11 22:50:41,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:51:37] 2025-10-11 22:50:41,576 | INFO     | did not find any defunct processes belonging to 3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:41,586 | INFO     | did not find any defunct processes belonging to 3176945
[2025-10-11 18:51:37] 2025-10-11 22:50:41,586 | INFO     | ready for new job
[2025-10-11 18:51:37] 2025-10-11 22:50:41,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:51:37] 2025-10-11 22:50:41,589 | INFO     | ***************************************
[2025-10-11 18:51:37] 2025-10-11 22:50:41,590 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:51:37] 2025-10-11 22:50:41,590 | INFO     | ***************************************
[2025-10-11 18:51:37] 2025-10-11 22:50:41,590 | INFO     | 
[2025-10-11 18:51:37] 2025-10-11 22:50:41,594 | INFO     | architecture information:
[2025-10-11 18:51:37] 2025-10-11 22:50:41,594 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:51:37] 2025-10-11 22:50:41,614 | INFO     | cat /etc/os-release:
[2025-10-11 18:51:37] NAME="CentOS Linux"
[2025-10-11 18:51:37] VERSION="7 (Core)"
[2025-10-11 18:51:37] ID="centos"
[2025-10-11 18:51:37] ID_LIKE="rhel fedora"
[2025-10-11 18:51:37] VERSION_ID="7"
[2025-10-11 18:51:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:51:37] ANSI_COLOR="0;31"
[2025-10-11 18:51:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:51:37] HOME_URL="https://www.centos.org/"
[2025-10-11 18:51:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:51:37] 
[2025-10-11 18:51:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:51:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:51:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:51:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:51:37] 
[2025-10-11 18:51:37] 2025-10-11 22:50:41,614 | INFO     | ***************************************
[2025-10-11 18:51:37] 2025-10-11 22:50:42,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 18:51:37] 2025-10-11 22:50:42,134 | INFO     | sufficient remaining disk space (73995911168 B)
[2025-10-11 18:51:37] 2025-10-11 22:50:42,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:51:37] 2025-10-11 22:50:42,134 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:51:37] 2025-10-11 22:50:42,135 | INFO     | update_server=False
[2025-10-11 18:51:37] 2025-10-11 22:50:42,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:51:37] 2025-10-11 22:50:42,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:51:37] 2025-10-11 22:50:42,209 | INFO     | all job control threads have been joined
[2025-10-11 18:51:37] 2025-10-11 22:50:42,781 | INFO     | all payload control threads have been joined
[2025-10-11 18:51:37] 2025-10-11 22:50:42,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:51:37] 2025-10-11 22:50:42,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:51:37] 2025-10-11 22:50:42,858 | INFO     | aborting loop
[2025-10-11 18:51:37] 2025-10-11 22:50:42,976 | INFO     | all data control threads have been joined
[2025-10-11 18:51:37] 2025-10-11 22:50:43,140 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,214 | INFO     | [job] control thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,517 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,786 | INFO     | [payload] control thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,863 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,901 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:43,982 | INFO     | [data] control thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,117 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,141 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,284 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,320 | INFO     | [job] validate thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,468 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,500 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:44,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:51:37] 2025-10-11 22:50:45,933 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:50:46,814 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:51:37] 2025-10-11 22:51:13,347 | INFO     | PID=3149795 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:51:37] 2025-10-11 22:51:13,348 | INFO     | .. there are 9 such processes running
[2025-10-11 18:51:37] 2025-10-11 22:51:13,348 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:51:37] 2025-10-11 22:51:13,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:51:37] 2025-10-11 22:51:13,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:51:37] 2025-10-11 22:51:29,586 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:51:37] 2025-10-11 22:51:31,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549366978368)>', '<ExcThread(monitor, started 140548878874368)>']
[2025-10-11 18:51:37] 2025-10-11 22:51:32,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:51:37] 2025-10-11 22:51:32,445 | INFO     | [monitor] control thread has ended
[2025-10-11 18:51:37] 2025-10-11 22:51:36,659 | INFO     | all workflow threads have been joined
[2025-10-11 18:51:37] 2025-10-11 22:51:36,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:51:37] 2025-10-11 22:51:36,660 | INFO     | traces error code: 0
[2025-10-11 18:51:37] 2025-10-11 22:51:36,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:51:37] 2025-10-11 22:51:36,897 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:51:37] 2025-10-11 22:51:36,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:51:37] 2025-10-11 22:51:36,904 [wrapper] pilotpid: 3149795
[2025-10-11 18:51:37] 2025-10-11 22:51:36,907 [wrapper] Pilot exit status: 0
[2025-10-11 18:51:37] 2025-10-11 22:51:36,924 [wrapper] pandaids: 6838182426 6838182426
[2025-10-11 18:51:37] 2025-10-11 22:51:36,972 [wrapper] cleanup supervisor_pilot 3475260 3149796
[2025-10-11 18:51:37] 2025-10-11 22:51:36,976 [wrapper] Test setup, not cleaning
[2025-10-11 18:51:37] 2025-10-11 22:51:36,978 [wrapper] apfmon messages muted
[2025-10-11 18:51:37] 2025-10-11 22:51:36,981 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:51:37] 2025-10-11 22:51:36,984 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:51:37]  *** Error codes and diagnostics ***
[2025-10-11 18:51:37]     "exeErrorCode": 0,
[2025-10-11 18:51:37]     "exeErrorDiag": "",
[2025-10-11 18:51:37]     "pilotErrorCode": 0,
[2025-10-11 18:51:37]     "pilotErrorDiag": "",
[2025-10-11 18:51:37]  *** Listing of results directory ***
[2025-10-11 18:51:37] total 631940
[2025-10-11 18:51:37] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 02:58 queuedata.json
[2025-10-11 18:51:37] -rwx------. 1 boincer umatlas     36292 Oct 11 02:58 runpilot2-wrapper.sh
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:51:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:04 run_atlas
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:04 job.xml
[2025-10-11 18:51:37] -rw-r--r--. 3 boincer umatlas 223958993 Oct 11 13:04 EVNT.46676267._002139.pool.root.1
[2025-10-11 18:51:37] -rw-r--r--. 3 boincer umatlas 223958993 Oct 11 13:04 ATLAS.root_0
[2025-10-11 18:51:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:04 start_atlas.sh
[2025-10-11 18:51:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:04 shared
[2025-10-11 18:51:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 13:04 input.tar.gz
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:04 boinc_lockfile
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 14:27 pandaJob.out
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas    975520 Oct 11 14:28 agis_schedconf.cvmfs.json
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas      6841 Oct 11 18:46 init_data.xml
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas 190126144 Oct 11 18:49 HITS.46676269._053295.pool.root.1
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas       531 Oct 11 18:49 boinc_task_state.xml
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas      1048 Oct 11 18:50 memory_monitor_summary.json
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas   1560580 Oct 11 18:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas    491305 Oct 11 18:50 log.46676269._053295.job.log.tgz.1
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas      7839 Oct 11 18:50 heartbeat.json
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas        96 Oct 11 18:51 pilot_heartbeat.json
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 18:51 boinc_mmap_file
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas        28 Oct 11 18:51 wrapper_checkpoint.txt
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas      4823 Oct 11 18:51 pilotlog.txt
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas   2085882 Oct 11 18:51 log.46676269._053295.job.log.1
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas       357 Oct 11 18:51 output.list
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas       620 Oct 11 18:51 runtime_log
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas   2600960 Oct 11 18:51 result.tar.gz
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas      8799 Oct 11 18:51 runtime_log.err
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas       785 Oct 11 18:51 pHyKDmrjiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNjfNDmz4nrQo.diag
[2025-10-11 18:51:37] -rw-r--r--. 1 boincer umatlas     23309 Oct 11 18:51 stderr.txt
[2025-10-11 18:51:37] HITS file was successfully produced:
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas 190126144 Oct 11 18:49 shared/HITS.pool.root.1
[2025-10-11 18:51:37]  *** Contents of shared directory: ***
[2025-10-11 18:51:37] total 407504
[2025-10-11 18:51:37] -rw-r--r--. 3 boincer umatlas 223958993 Oct 11 13:04 ATLAS.root_0
[2025-10-11 18:51:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:04 start_atlas.sh
[2025-10-11 18:51:37] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 13:04 input.tar.gz
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas 190126144 Oct 11 18:49 HITS.pool.root.1
[2025-10-11 18:51:37] -rw-------. 1 boincer umatlas   2600960 Oct 11 18:51 result.tar.gz
18:51:38 (3138794): run_atlas exited; CPU time 43345.596187
18:51:38 (3138794): called boinc_finish(0)

</stderr_txt>
]]>

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