Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:22 (3783946): wrapper (7.7.26015): starting
13:00:22 (3783946): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:00:22] Arguments: --nthreads 8
[2025-10-11 13:00:22] Threads: 8
[2025-10-11 13:00:22] Checking for CVMFS
[2025-10-11 13:00:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:00:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:00:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:00:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:00:24] 2.13.2.0 558603 128094 494676 151590 2 456 29520149 32935936 43375 16776704 0 245321171 99.608 244391296 19988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:00:24] CVMFS is ok
[2025-10-11 13:00:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:00:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:00:24] Further information can be found at the LHC@home message board.
[2025-10-11 13:00:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:00:24] Checking for apptainer binary...
[2025-10-11 13:00:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:00:24] Running /usr/bin/apptainer --version
[2025-10-11 13:00:24] apptainer version 1.4.3-1.el9
[2025-10-11 13:00:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:00:24] c6-6-8-3.aglt2.org
[2025-10-11 13:00:24] apptainer works
[2025-10-11 13:00:24] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:00:24] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:00:25] Starting ATLAS job with PandaID=6838228113
[2025-10-11 13:00:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:42:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:42:03] 2025-10-11 20:41:15,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:42:03] 2025-10-11 20:41:15,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:42:03] 2025-10-11 20:41:15,028 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:42:03] 2025-10-11 20:41:15,029 | INFO     | sum of square deviations: 2996475734.1971946
[2025-10-11 16:42:03] 2025-10-11 20:41:15,033 | INFO     | sum of deviations: 31335602383.436592
[2025-10-11 16:42:03] 2025-10-11 20:41:15,034 | INFO     | mean x: 1760208713.6197183
[2025-10-11 16:42:03] 2025-10-11 20:41:15,034 | INFO     | mean y: 2108528.6103286385
[2025-10-11 16:42:03] 2025-10-11 20:41:15,034 | INFO     | -- intersect: -18405249065.63544
[2025-10-11 16:42:03] 2025-10-11 20:41:15,034 | INFO     | intersect: -18405249065.63544
[2025-10-11 16:42:03] 2025-10-11 20:41:15,034 | INFO     | chi2: 2.856655524241862
[2025-10-11 16:42:03] 2025-10-11 20:41:15,035 | INFO     | sum of square deviations: 2790384182.75
[2025-10-11 16:42:03] 2025-10-11 20:41:15,036 | INFO     | sum of deviations: 43877407853.750015
[2025-10-11 16:42:03] 2025-10-11 20:41:15,036 | INFO     | mean x: 1760208561.125
[2025-10-11 16:42:03] 2025-10-11 20:41:15,036 | INFO     | mean y: 2117633.394230769
[2025-10-11 16:42:03] 2025-10-11 20:41:15,036 | INFO     | -- intersect: -27676289311.999386
[2025-10-11 16:42:03] 2025-10-11 20:41:15,036 | INFO     | intersect: -27676289311.999386
[2025-10-11 16:42:03] 2025-10-11 20:41:15,042 | INFO     | chi2: 2.006510277883191
[2025-10-11 16:42:03] 2025-10-11 20:41:15,042 | INFO     | current chi2=2.006510277883191 (change=29.7601597092913 %)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,042 | INFO     | sum of square deviations: 2593954663.5467863
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | sum of deviations: 43586004713.11333
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | mean x: 1760208408.6256158
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | mean y: 2117415.093596059
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | -- intersect: -29574518241.874977
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | intersect: -29574518241.874977
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | chi2: 2.002400942149604
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | current chi2=2.002400942149604 (change=0.20480013378862535 %)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,044 | INFO     | right removable region: 202
[2025-10-11 16:42:03] 2025-10-11 20:41:15,045 | INFO     | sum of square deviations: 2790342397.4951835
[2025-10-11 16:42:03] 2025-10-11 20:41:15,050 | INFO     | sum of deviations: -5325041141.778848
[2025-10-11 16:42:03] 2025-10-11 20:41:15,050 | INFO     | mean x: 1760208866.1298077
[2025-10-11 16:42:03] 2025-10-11 20:41:15,050 | INFO     | mean y: 2135484.028846154
[2025-10-11 16:42:03] 2025-10-11 20:41:15,051 | INFO     | -- intersect: 3361287622.0170665
[2025-10-11 16:42:03] 2025-10-11 20:41:15,051 | INFO     | intersect: 3361287622.0170665
[2025-10-11 16:42:03] 2025-10-11 20:41:15,051 | INFO     | chi2: 1.040338143171724
[2025-10-11 16:42:03] 2025-10-11 20:41:15,051 | INFO     | current chi2=1.040338143171724 (change=63.58195328966648 %)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,051 | INFO     | sum of square deviations: 2593870850.463049
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | sum of deviations: -6653625192.576355
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | mean x: 1760209018.6453202
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | mean y: 2136437.866995074
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | -- intersect: 4517307680.324136
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | intersect: 4517307680.324136
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | chi2: 0.9603697380336048
[2025-10-11 16:42:03] 2025-10-11 20:41:15,053 | INFO     | current chi2=0.9603697380336048 (change=7.68677046621746 %)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,058 | INFO     | left removable region: 20
[2025-10-11 16:42:03] 2025-10-11 20:41:15,058 | INFO     | sum of square deviations: 1869230461.7197864
[2025-10-11 16:42:03] 2025-10-11 20:41:15,059 | INFO     | sum of deviations: 5632899077.329675
[2025-10-11 16:42:03] 2025-10-11 20:41:15,059 | INFO     | mean x: 1760208988.1703296
[2025-10-11 16:42:03] 2025-10-11 20:41:15,059 | INFO     | mean y: 2147649.5054945056
[2025-10-11 16:42:03] 2025-10-11 20:41:15,059 | INFO     | -- intersect: -5302216787.317174
[2025-10-11 16:42:03] 2025-10-11 20:41:15,059 | INFO     | intersect: -5302216787.317174
[2025-10-11 16:42:03] 2025-10-11 20:41:15,060 | INFO     | chi2: 0.06417504281342713
[2025-10-11 16:42:03] 2025-10-11 20:41:15,060 | INFO     | -- intersect: -5302216787.317174
[2025-10-11 16:42:03] 2025-10-11 20:41:15,060 | INFO     | current memory leak: 3.01 B/s (using 182 data points, chi2=0.06)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,060 | INFO     | could have reported an average CPU frequency of 2674 MHz (11 samples)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | ..............................
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . Timing measurements:
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . get job = 0 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . initial setup = 4 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . payload setup = 40 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . stage-in = 0 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . payload execution = 13018 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . stage-out = 4 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | . log creation = 0 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,061 | INFO     | ..............................
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | 
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | job summary report
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | --------------------------------------------------
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | PanDA job id: 6838228113
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | task id: 46676269
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | errors: (none)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | pilot state: finished 
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | transexitcode: 0
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | exeerrorcode: 0
[2025-10-11 16:42:03] 2025-10-11 20:41:15,332 | INFO     | exeerrordiag: 
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | exitcode: 0
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | exitmsg: OK
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | cpuconsumptiontime: 42084 s
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | nevents: 400
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | neventsw: 0
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | pid: 3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | pgrp: 3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | corecount: 8
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | event service: False
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2348997, 43: 2349415, 46: 2349443, 13062: 2379339, 13068: 2388393, 13098: 2388531}
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | --------------------------------------------------
[2025-10-11 16:42:03] 2025-10-11 20:41:15,333 | INFO     | 
[2025-10-11 16:42:03] 2025-10-11 20:41:15,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 16:42:03] 2025-10-11 20:41:15,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:42:03] 2025-10-11 20:41:15,414 | INFO     | job 6838228113 has completed (purged errors)
[2025-10-11 16:42:03] 2025-10-11 20:41:15,414 | INFO     | overall cleanup function is called
[2025-10-11 16:42:03] 2025-10-11 20:41:16,428 | INFO     | --- collectZombieJob: --- 10, [3807998]
[2025-10-11 16:42:03] 2025-10-11 20:41:16,428 | INFO     | zombie collector waiting for pid 3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:16,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:42:03] 2025-10-11 20:41:16,428 | INFO     | collected zombie processes
[2025-10-11 16:42:03] 2025-10-11 20:41:16,428 | INFO     | will attempt to kill all subprocesses of pid=3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:18,078 | INFO     | process IDs to be killed: [3807998] (in reverse order)
[2025-10-11 16:42:03] 2025-10-11 20:41:18,826 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:42:03] 2025-10-11 20:41:18,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:42:03] 2025-10-11 20:41:18,893 | INFO     | did not find any defunct processes belonging to 3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:19,025 | INFO     | did not find any defunct processes belonging to 3807998
[2025-10-11 16:42:03] 2025-10-11 20:41:19,025 | INFO     | ready for new job
[2025-10-11 16:42:03] 2025-10-11 20:41:19,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:42:03] 2025-10-11 20:41:19,027 | INFO     | ***************************************
[2025-10-11 16:42:03] 2025-10-11 20:41:19,028 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:42:03] 2025-10-11 20:41:19,028 | INFO     | ***************************************
[2025-10-11 16:42:03] 2025-10-11 20:41:19,028 | INFO     | 
[2025-10-11 16:42:03] 2025-10-11 20:41:19,072 | INFO     | architecture information:
[2025-10-11 16:42:03] 2025-10-11 20:41:19,076 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:42:03] 2025-10-11 20:41:19,144 | INFO     | cat /etc/os-release:
[2025-10-11 16:42:03] NAME="CentOS Linux"
[2025-10-11 16:42:03] VERSION="7 (Core)"
[2025-10-11 16:42:03] ID="centos"
[2025-10-11 16:42:03] ID_LIKE="rhel fedora"
[2025-10-11 16:42:03] VERSION_ID="7"
[2025-10-11 16:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:42:03] ANSI_COLOR="0;31"
[2025-10-11 16:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:42:03] HOME_URL="https://www.centos.org/"
[2025-10-11 16:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:42:03] 
[2025-10-11 16:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:42:03] 
[2025-10-11 16:42:03] 2025-10-11 20:41:19,144 | INFO     | ***************************************
[2025-10-11 16:42:03] 2025-10-11 20:41:19,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 16:42:03] 2025-10-11 20:41:19,677 | INFO     | sufficient remaining disk space (93522493440 B)
[2025-10-11 16:42:03] 2025-10-11 20:41:19,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:42:03] 2025-10-11 20:41:19,677 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:42:03] 2025-10-11 20:41:19,678 | INFO     | update_server=False
[2025-10-11 16:42:03] 2025-10-11 20:41:19,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:42:03] 2025-10-11 20:41:19,713 | INFO     | all payload control threads have been joined
[2025-10-11 16:42:03] 2025-10-11 20:41:20,080 | INFO     | all job control threads have been joined
[2025-10-11 16:42:03] 2025-10-11 20:41:20,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:42:03] 2025-10-11 20:41:20,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:42:03] 2025-10-11 20:41:20,481 | INFO     | aborting loop
[2025-10-11 16:42:03] 2025-10-11 20:41:20,665 | INFO     | all data control threads have been joined
[2025-10-11 16:42:03] 2025-10-11 20:41:20,684 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:20,718 | INFO     | [payload] control thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:20,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:42:03] 2025-10-11 20:41:20,758 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:20,878 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,076 | INFO     | [job] validate thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,090 | INFO     | [job] control thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,125 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,374 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,486 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,671 | INFO     | [data] control thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:21,761 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:22,035 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:22,307 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:22,751 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:22,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:42:03] 2025-10-11 20:41:26,964 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:30,415 | INFO     | job.realtimelogging is not enabled
[2025-10-11 16:42:03] 2025-10-11 20:41:31,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:42:03] 2025-10-11 20:41:49,732 | INFO     | PID=3794057 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 16:42:03] 2025-10-11 20:41:49,733 | INFO     | .. there are 53 such processes running
[2025-10-11 16:42:03] 2025-10-11 20:41:49,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:42:03] 2025-10-11 20:41:49,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:42:03] 2025-10-11 20:41:49,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:42:03] 2025-10-11 20:41:54,895 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:42:03] 2025-10-11 20:41:56,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655638894400)>', '<ExcThread(monitor, started 139655156594432)>']
[2025-10-11 16:42:03] 2025-10-11 20:41:56,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:42:03] 2025-10-11 20:41:56,807 | INFO     | [monitor] control thread has ended
[2025-10-11 16:42:03] 2025-10-11 20:42:01,208 | INFO     | all workflow threads have been joined
[2025-10-11 16:42:03] 2025-10-11 20:42:01,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:42:03] 2025-10-11 20:42:01,208 | INFO     | traces error code: 0
[2025-10-11 16:42:03] 2025-10-11 20:42:01,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:42:03] 2025-10-11 20:42:02,876 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:42:03] 2025-10-11 20:42:02,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:42:03] 2025-10-11 20:42:02,954 [wrapper] pilotpid: 3794057
[2025-10-11 16:42:03] 2025-10-11 20:42:02,965 [wrapper] Pilot exit status: 0
[2025-10-11 16:42:03] 2025-10-11 20:42:03,045 [wrapper] pandaids: 6838228113
[2025-10-11 16:42:03] 2025-10-11 20:42:03,190 [wrapper] cleanup supervisor_pilot  563282 3794058
[2025-10-11 16:42:03] 2025-10-11 20:42:03,193 [wrapper] Test setup, not cleaning
[2025-10-11 16:42:03] 2025-10-11 20:42:03,200 [wrapper] apfmon messages muted
[2025-10-11 16:42:03] 2025-10-11 20:42:03,203 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:42:03] 2025-10-11 20:42:03,205 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:42:03]  *** Error codes and diagnostics ***
[2025-10-11 16:42:03]     "exeErrorCode": 0,
[2025-10-11 16:42:03]     "exeErrorDiag": "",
[2025-10-11 16:42:03]     "pilotErrorCode": 0,
[2025-10-11 16:42:03]     "pilotErrorDiag": "",
[2025-10-11 16:42:03]  *** Listing of results directory ***
[2025-10-11 16:42:03] total 414124
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 03:58 pilot3.tar.gz
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 04:06 queuedata.json
[2025-10-11 16:42:03] -rwx------. 1 boincer umatlas     36292 Oct 11 04:07 runpilot2-wrapper.sh
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:42:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:00 run_atlas
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:00 job.xml
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas 219660039 Oct 11 13:00 EVNT.46676267._002172.pool.root.1
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas    569688 Oct 11 13:00 input.tar.gz
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:00 start_atlas.sh
[2025-10-11 16:42:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:00 shared
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:00 boinc_lockfile
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 13:00 pandaJob.out
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas    975512 Oct 11 13:01 agis_schedconf.cvmfs.json
[2025-10-11 16:42:03] drwx------. 5 boincer umatlas      4096 Oct 11 13:01 pilot3
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas      6858 Oct 11 16:36 init_data.xml
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas 196397641 Oct 11 16:39 HITS.46676269._054148.pool.root.1
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas       531 Oct 11 16:39 boinc_task_state.xml
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas      1045 Oct 11 16:40 memory_monitor_summary.json
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:40 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas    443402 Oct 11 16:40 log.46676269._054148.job.log.tgz.1
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas      7834 Oct 11 16:41 heartbeat.json
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas        95 Oct 11 16:41 pilot_heartbeat.json
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 16:42 boinc_mmap_file
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas      4896 Oct 11 16:42 pilotlog.txt
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas        28 Oct 11 16:42 wrapper_checkpoint.txt
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas   1610258 Oct 11 16:42 log.46676269._054148.job.log.1
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas       357 Oct 11 16:42 output.list
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas       620 Oct 11 16:42 runtime_log
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas   2068480 Oct 11 16:42 result.tar.gz
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 16:42 runtime_log.err
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas       655 Oct 11 16:42 Qb7MDmMojR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJXRMDmfdCH1n.diag
[2025-10-11 16:42:03] -rw-r--r--. 1 boincer umatlas     21008 Oct 11 16:42 stderr.txt
[2025-10-11 16:42:03] HITS file was successfully produced:
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas 196397641 Oct 11 16:39 shared/HITS.pool.root.1
[2025-10-11 16:42:03]  *** Contents of shared directory: ***
[2025-10-11 16:42:03] total 408908
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas 219660039 Oct 11 13:00 ATLAS.root_0
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas    569688 Oct 11 13:00 input.tar.gz
[2025-10-11 16:42:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:00 start_atlas.sh
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas 196397641 Oct 11 16:39 HITS.pool.root.1
[2025-10-11 16:42:03] -rw-------. 1 boincer umatlas   2068480 Oct 11 16:42 result.tar.gz
16:42:05 (3783946): run_atlas exited; CPU time 42743.289173
16:42:05 (3783946): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN