Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:28:45 (3381608): wrapper (7.7.26015): starting
13:28:45 (3381608): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 13:28:45] Arguments: --nthreads 9
[2025-10-11 13:28:45] Threads: 9
[2025-10-11 13:28:45] Checking for CVMFS
[2025-10-11 13:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:28:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:28:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:28:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:28:47] 2.13.2.0 2367554 128121 269496 151591 1 533 23959750 32935936 54604 16776704 0 487632233 99.658 447214670 18166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:28:47] CVMFS is ok
[2025-10-11 13:28:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:28:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:28:47] Further information can be found at the LHC@home message board.
[2025-10-11 13:28:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:28:47] Checking for apptainer binary...
[2025-10-11 13:28:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:28:47] Running /usr/bin/apptainer --version
[2025-10-11 13:28:47] apptainer version 1.4.3-1.el9
[2025-10-11 13:28:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:28:47] c7-2-15.aglt2.org
[2025-10-11 13:28:47] apptainer works
[2025-10-11 13:28:47] Set ATHENA_PROC_NUMBER=9
[2025-10-11 13:28:47] Set ATHENA_CORE_NUMBER=9
[2025-10-11 13:28:47] Starting ATLAS job with PandaID=6838292445
[2025-10-11 13:28:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:14:14]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:14:14] 2025-10-11 21:13:16,796 | INFO     | monitor loop #812: job 0:6838292445 is in state 'finished'
[2025-10-11 17:14:14] 2025-10-11 21:13:16,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,610 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:14:14] 2025-10-11 21:13:18,620 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3318.8707499999996
[2025-10-11 17:14:14] 2025-10-11 21:13:18,666 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838292445/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,674 | INFO     | extracted standard info from prmon json
[2025-10-11 17:14:14] 2025-10-11 21:13:18,674 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:14:14] 2025-10-11 21:13:18,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:14:14] 2025-10-11 21:13:18,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:14:14] 2025-10-11 21:13:18,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:14:14] 2025-10-11 21:13:18,686 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:14:14] 2025-10-11 21:13:18,687 | INFO     | sum of square deviations: 3212479266.481658
[2025-10-11 17:14:14] 2025-10-11 21:13:18,688 | INFO     | sum of deviations: -11586288876.385311
[2025-10-11 17:14:14] 2025-10-11 21:13:18,688 | INFO     | mean x: 1760210510.5091743
[2025-10-11 17:14:14] 2025-10-11 21:13:18,688 | INFO     | mean y: 2468726.1926605506
[2025-10-11 17:14:14] 2025-10-11 21:13:18,688 | INFO     | -- intersect: 6350932254.284165
[2025-10-11 17:14:14] 2025-10-11 21:13:18,692 | INFO     | intersect: 6350932254.284165
[2025-10-11 17:14:14] 2025-10-11 21:13:18,692 | INFO     | chi2: 3.786067955163028
[2025-10-11 17:14:14] 2025-10-11 21:13:18,693 | INFO     | sum of square deviations: 2996466523.9812303
[2025-10-11 17:14:14] 2025-10-11 21:13:18,694 | INFO     | sum of deviations: 4489552680.22536
[2025-10-11 17:14:14] 2025-10-11 21:13:18,694 | INFO     | mean x: 1760210358.0093896
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | mean y: 2479883.8873239434
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | -- intersect: -2634812095.621204
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | intersect: -2634812095.621204
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | chi2: 2.9991356539233993
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | current chi2=2.9991356539233993 (change=20.784949202153012 %)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,695 | INFO     | right removable region: 212
[2025-10-11 17:14:14] 2025-10-11 21:13:18,696 | INFO     | sum of square deviations: 2996465303.9812303
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | sum of deviations: -62841095048.117355
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | mean x: 1760210663.0093896
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | mean y: 2504689.558685446
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | -- intersect: 36917187276.37752
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | intersect: 36917187276.37752
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | chi2: 1.2045178543108757
[2025-10-11 17:14:14] 2025-10-11 21:13:18,697 | INFO     | current chi2=1.2045178543108757 (change=68.18551942079421 %)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,698 | INFO     | sum of square deviations: 2790358503.9807787
[2025-10-11 17:14:14] 2025-10-11 21:13:18,694 | INFO     | time since job start (13416s) is within the limit (172800.0s)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,703 | INFO     | sum of deviations: -63529751713.31725
[2025-10-11 17:14:14] 2025-10-11 21:13:18,707 | INFO     | mean x: 1760210815.5096154
[2025-10-11 17:14:14] 2025-10-11 21:13:18,707 | INFO     | mean y: 2505147.908653846
[2025-10-11 17:14:14] 2025-10-11 21:13:18,707 | INFO     | -- intersect: 40078271725.17419
[2025-10-11 17:14:14] 2025-10-11 21:13:18,707 | INFO     | intersect: 40078271725.17419
[2025-10-11 17:14:14] 2025-10-11 21:13:18,708 | INFO     | chi2: 1.1683615781622645
[2025-10-11 17:14:14] 2025-10-11 21:13:18,708 | INFO     | current chi2=1.1683615781622645 (change=3.0017218938856463 %)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,708 | INFO     | left removable region: 20
[2025-10-11 17:14:14] 2025-10-11 21:13:18,708 | INFO     | sum of square deviations: 2194685451.9791617
[2025-10-11 17:14:14] 2025-10-11 21:13:18,709 | INFO     | sum of deviations: -27797939111.479168
[2025-10-11 17:14:14] 2025-10-11 21:13:18,709 | INFO     | mean x: 1760210937.5104167
[2025-10-11 17:14:14] 2025-10-11 21:13:18,709 | INFO     | mean y: 2502244.2395833335
[2025-10-11 17:14:14] 2025-10-11 21:13:18,709 | INFO     | -- intersect: 22297376628.24257
[2025-10-11 17:14:14] 2025-10-11 21:13:18,709 | INFO     | intersect: 22297376628.24257
[2025-10-11 17:14:14] 2025-10-11 21:13:18,710 | INFO     | chi2: 0.26981762021801503
[2025-10-11 17:14:14] 2025-10-11 21:13:18,710 | INFO     | -- intersect: 22297376628.24257
[2025-10-11 17:14:14] 2025-10-11 21:13:18,710 | INFO     | current memory leak: -12.67 B/s (using 192 data points, chi2=0.27)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,710 | INFO     | could have reported an average CPU frequency of 3347 MHz (11 samples)
[2025-10-11 17:14:14] 2025-10-11 21:13:18,711 | INFO     | ..............................
[2025-10-11 17:14:14] 2025-10-11 21:13:18,711 | INFO     | . Timing measurements:
[2025-10-11 17:14:14] 2025-10-11 21:13:18,711 | INFO     | . get job = 0 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,711 | INFO     | . initial setup = 7 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | . payload setup = 30 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | . stage-in = 0 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | . payload execution = 13296 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | . stage-out = 4 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | . log creation = 0 s
[2025-10-11 17:14:14] 2025-10-11 21:13:18,715 | INFO     | ..............................
[2025-10-11 17:14:14] 2025-10-11 21:13:19,341 | INFO     | 
[2025-10-11 17:14:14] 2025-10-11 21:13:19,341 | INFO     | job summary report
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | --------------------------------------------------
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | PanDA job id: 6838292445
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | task id: 46676269
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | errors: (none)
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | pilot state: finished 
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | transexitcode: 0
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | exeerrorcode: 0
[2025-10-11 17:14:14] 2025-10-11 21:13:19,345 | INFO     | exeerrordiag: 
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | exitcode: 0
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | exitmsg: OK
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | cpuconsumptiontime: 29497 s
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | nevents: 400
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | neventsw: 0
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | pid: 3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | pgrp: 3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | corecount: 9
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | event service: False
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348913, 13: 2348913, 24: 2348969, 28: 2349259, 34: 2349415, 13332: 2379458, 13339: 2388456, 13343: 2388512, 13361: 2388706}
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | --------------------------------------------------
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | 
[2025-10-11 17:14:14] 2025-10-11 21:13:19,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 17:14:14] 2025-10-11 21:13:19,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | job 6838292445 has completed (purged errors)
[2025-10-11 17:14:14] 2025-10-11 21:13:19,451 | INFO     | overall cleanup function is called
[2025-10-11 17:14:14] 2025-10-11 21:13:20,478 | INFO     | --- collectZombieJob: --- 10, [3399865]
[2025-10-11 17:14:14] 2025-10-11 21:13:20,478 | INFO     | zombie collector waiting for pid 3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:20,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:14:14] 2025-10-11 21:13:20,478 | INFO     | collected zombie processes
[2025-10-11 17:14:14] 2025-10-11 21:13:20,478 | INFO     | will attempt to kill all subprocesses of pid=3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:24,089 | INFO     | process IDs to be killed: [3399865] (in reverse order)
[2025-10-11 17:14:14] 2025-10-11 21:13:24,472 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:14:14] 2025-10-11 21:13:24,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:14:14] 2025-10-11 21:13:24,604 | INFO     | did not find any defunct processes belonging to 3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:24,708 | INFO     | did not find any defunct processes belonging to 3399865
[2025-10-11 17:14:14] 2025-10-11 21:13:24,714 | INFO     | ready for new job
[2025-10-11 17:14:14] 2025-10-11 21:13:24,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:14:14] 2025-10-11 21:13:24,716 | INFO     | ***************************************
[2025-10-11 17:14:14] 2025-10-11 21:13:24,716 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:14:14] 2025-10-11 21:13:24,716 | INFO     | ***************************************
[2025-10-11 17:14:14] 2025-10-11 21:13:24,716 | INFO     | 
[2025-10-11 17:14:14] 2025-10-11 21:13:24,737 | INFO     | architecture information:
[2025-10-11 17:14:14] 2025-10-11 21:13:24,741 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:14:14] 2025-10-11 21:13:24,930 | INFO     | cat /etc/os-release:
[2025-10-11 17:14:14] NAME="CentOS Linux"
[2025-10-11 17:14:14] VERSION="7 (Core)"
[2025-10-11 17:14:14] ID="centos"
[2025-10-11 17:14:14] ID_LIKE="rhel fedora"
[2025-10-11 17:14:14] VERSION_ID="7"
[2025-10-11 17:14:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:14:14] ANSI_COLOR="0;31"
[2025-10-11 17:14:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:14:14] HOME_URL="https://www.centos.org/"
[2025-10-11 17:14:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:14:14] 
[2025-10-11 17:14:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:14:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:14:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:14:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:14:14] 
[2025-10-11 17:14:14] 2025-10-11 21:13:24,930 | INFO     | ***************************************
[2025-10-11 17:14:14] 2025-10-11 21:13:25,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 17:14:14] 2025-10-11 21:13:25,476 | INFO     | sufficient remaining disk space (73955016704 B)
[2025-10-11 17:14:14] 2025-10-11 21:13:25,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:14:14] 2025-10-11 21:13:25,477 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:14:14] 2025-10-11 21:13:25,477 | INFO     | update_server=False
[2025-10-11 17:14:14] 2025-10-11 21:13:25,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:14:14] 2025-10-11 21:13:25,523 | INFO     | all payload control threads have been joined
[2025-10-11 17:14:14] 2025-10-11 21:13:25,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:14:14] 2025-10-11 21:13:25,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:14:14] 2025-10-11 21:13:25,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:14:14] 2025-10-11 21:13:25,526 | INFO     | aborting loop
[2025-10-11 17:14:14] 2025-10-11 21:13:25,641 | INFO     | all job control threads have been joined
[2025-10-11 17:14:14] 2025-10-11 21:13:25,863 | INFO     | all data control threads have been joined
[2025-10-11 17:14:14] 2025-10-11 21:13:26,482 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,533 | INFO     | [payload] control thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,548 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,649 | INFO     | [job] control thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,855 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,882 | INFO     | [data] control thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,955 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:26,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,108 | INFO     | [job] validate thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,266 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,281 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,435 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,439 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:27,539 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:28,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:14:14] 2025-10-11 21:13:29,018 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:29,543 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:14:14] 2025-10-11 21:13:54,698 | INFO     | PID=3386711 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:14:14] 2025-10-11 21:13:54,698 | INFO     | .. there are 65 such processes running
[2025-10-11 17:14:14] 2025-10-11 21:13:54,698 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:14:14] 2025-10-11 21:13:54,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:14:14] 2025-10-11 21:13:54,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:14:14] 2025-10-11 21:14:05,471 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:14:14] 2025-10-11 21:14:06,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012839532352)>', '<ExcThread(monitor, started 140012326721280)>']
[2025-10-11 17:14:14] 2025-10-11 21:14:06,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:14:14] 2025-10-11 21:14:06,860 | INFO     | [monitor] control thread has ended
[2025-10-11 17:14:14] 2025-10-11 21:14:11,552 | INFO     | all workflow threads have been joined
[2025-10-11 17:14:14] 2025-10-11 21:14:11,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:14:14] 2025-10-11 21:14:11,552 | INFO     | traces error code: 0
[2025-10-11 17:14:14] 2025-10-11 21:14:11,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:14:14] 2025-10-11 21:14:12,757 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:14:14] 2025-10-11 21:14:12,797 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:14:14] 2025-10-11 21:14:12,855 [wrapper] pilotpid: 3386711
[2025-10-11 17:14:14] 2025-10-11 21:14:12,897 [wrapper] Pilot exit status: 0
[2025-10-11 17:14:14] 2025-10-11 21:14:13,118 [wrapper] pandaids: 6838292445
[2025-10-11 17:14:14] 2025-10-11 21:14:13,699 [wrapper] cleanup supervisor_pilot  291935 3386712
[2025-10-11 17:14:14] 2025-10-11 21:14:13,719 [wrapper] Test setup, not cleaning
[2025-10-11 17:14:14] 2025-10-11 21:14:13,722 [wrapper] apfmon messages muted
[2025-10-11 17:14:14] 2025-10-11 21:14:13,725 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:14:14] 2025-10-11 21:14:13,728 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:14:14]  *** Error codes and diagnostics ***
[2025-10-11 17:14:14]     "exeErrorCode": 0,
[2025-10-11 17:14:14]     "exeErrorDiag": "",
[2025-10-11 17:14:14]     "pilotErrorCode": 0,
[2025-10-11 17:14:14]     "pilotErrorDiag": "",
[2025-10-11 17:14:14]  *** Listing of results directory ***
[2025-10-11 17:14:14] total 408520
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:03 pilot3.tar.gz
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:08 queuedata.json
[2025-10-11 17:14:14] -rwx------. 1 boincer umatlas     36292 Oct 11 05:09 runpilot2-wrapper.sh
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:14:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:28 run_atlas
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:28 job.xml
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas 222402437 Oct 11 13:28 EVNT.46676267._002201.pool.root.1
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:28 start_atlas.sh
[2025-10-11 17:14:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:28 shared
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 13:28 input.tar.gz
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:28 boinc_lockfile
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 13:28 pandaJob.out
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas    975520 Oct 11 13:29 agis_schedconf.cvmfs.json
[2025-10-11 17:14:14] drwx------. 5 boincer umatlas      4096 Oct 11 13:29 pilot3
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas 187773236 Oct 11 17:11 HITS.46676269._054884.pool.root.1
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas       531 Oct 11 17:11 boinc_task_state.xml
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas      6936 Oct 11 17:12 init_data.xml
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas      1048 Oct 11 17:12 memory_monitor_summary.json
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas   1560580 Oct 11 17:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas    450312 Oct 11 17:12 log.46676269._054884.job.log.tgz.1
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas      7803 Oct 11 17:13 heartbeat.json
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas        95 Oct 11 17:13 pilot_heartbeat.json
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas      4824 Oct 11 17:14 pilotlog.txt
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas        28 Oct 11 17:14 wrapper_checkpoint.txt
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas   1670131 Oct 11 17:14 log.46676269._054884.job.log.1
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas       357 Oct 11 17:14 output.list
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:14 runtime_log
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas   2140160 Oct 11 17:14 result.tar.gz
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas       659 Oct 11 17:14 VEgMDmBmkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWyfNDmWkLCTm.diag
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 17:14 runtime_log.err
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:14 boinc_mmap_file
[2025-10-11 17:14:14] -rw-r--r--. 1 boincer umatlas     21252 Oct 11 17:14 stderr.txt
[2025-10-11 17:14:14] HITS file was successfully produced:
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas 187773236 Oct 11 17:11 shared/HITS.pool.root.1
[2025-10-11 17:14:14]  *** Contents of shared directory: ***
[2025-10-11 17:14:14] total 403244
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas 222402437 Oct 11 13:28 ATLAS.root_0
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:28 start_atlas.sh
[2025-10-11 17:14:14] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 13:28 input.tar.gz
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas 187773236 Oct 11 17:11 HITS.pool.root.1
[2025-10-11 17:14:14] -rw-------. 1 boincer umatlas   2140160 Oct 11 17:14 result.tar.gz
17:14:36 (3381608): run_atlas exited; CPU time 30083.103999
17:14:36 (3381608): called boinc_finish(0)

</stderr_txt>
]]>

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