Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:26 (4058992): wrapper (7.7.26015): starting
13:10:26 (4058992): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:10:26] Arguments: --nthreads 8
[2025-10-11 13:10:26] Threads: 8
[2025-10-11 13:10:26] Checking for CVMFS
[2025-10-11 13:10:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:10:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:10:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:10:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:10:29] 2.13.2.0 2754702 128087 389752 151590 2 864 30349692 32935936 99848 16776704 0 821596411 99.687 680474908 33356 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:10:29] CVMFS is ok
[2025-10-11 13:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:10:29] Further information can be found at the LHC@home message board.
[2025-10-11 13:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:10:29] Checking for apptainer binary...
[2025-10-11 13:10:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:10:29] Running /usr/bin/apptainer --version
[2025-10-11 13:10:29] apptainer version 1.4.3-1.el9
[2025-10-11 13:10:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:10:30] c7-9-14.aglt2.org
[2025-10-11 13:10:30] apptainer works
[2025-10-11 13:10:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:10:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:10:30] Starting ATLAS job with PandaID=6829376163
[2025-10-11 13:10:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:43:17]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:43:17] 2025-10-11 18:41:49,703 | INFO     | monitor loop #344: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:41:49,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:41:49,750 | INFO     | time since job start (5391s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:41:51,758 | INFO     | time since job start (5393s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:41:52,214 | INFO     | monitor loop #345: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:41:52,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:41:53,765 | INFO     | time since job start (5395s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:41:54,724 | INFO     | monitor loop #346: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:41:54,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:41:55,776 | INFO     | time since job start (5397s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:41:57,239 | INFO     | monitor loop #347: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:41:57,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:41:57,783 | INFO     | time since job start (5399s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:41:59,745 | INFO     | monitor loop #348: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:41:59,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:41:59,796 | INFO     | time since job start (5401s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:01,802 | INFO     | time since job start (5403s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:02,264 | INFO     | monitor loop #349: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:02,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:04,747 | INFO     | PID=4069448 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:43:17] 2025-10-11 18:42:04,747 | INFO     | .. there are 117 such processes running
[2025-10-11 14:43:17] 2025-10-11 18:42:04,791 | INFO     | monitor loop #350: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:04,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:05,749 | INFO     | time since job start (5407s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:07,308 | INFO     | monitor loop #351: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:07,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:07,767 | INFO     | time since job start (5409s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:09,774 | INFO     | time since job start (5411s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:09,822 | INFO     | monitor loop #352: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:09,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:11,792 | INFO     | time since job start (5413s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:12,340 | INFO     | monitor loop #353: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:12,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:13,811 | INFO     | time since job start (5415s) is within the limit (172800.0s)
[2025-10-11 14:43:17] 2025-10-11 18:42:14,848 | INFO     | monitor loop #354: job 0:6829376163 is in state 'finished'
[2025-10-11 14:43:17] 2025-10-11 18:42:14,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,099 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 14:43:17] 2025-10-11 18:42:15,118 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9760156250045
[2025-10-11 14:43:17] 2025-10-11 18:42:15,141 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6829376163/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,141 | INFO     | extracted standard info from prmon json
[2025-10-11 14:43:17] 2025-10-11 18:42:15,141 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:43:17] 2025-10-11 18:42:15,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:43:17] 2025-10-11 18:42:15,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:43:17] 2025-10-11 18:42:15,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | sum of square deviations: 147133686.21794847
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | sum of deviations: -5013148893.705128
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | mean x: 1760205564.628205
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | mean y: 2214658.3205128205
[2025-10-11 14:43:17] 2025-10-11 18:42:15,159 | INFO     | -- intersect: 59976057534.37195
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | intersect: 59976057534.37195
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | chi2: 0.6038827519311857
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | -- intersect: 59976057534.37195
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | current memory leak: -34.07 B/s (using 78 data points, chi2=0.60)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | ..............................
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . Timing measurements:
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . get job = 0 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . initial setup = 5 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . payload setup = 56 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . stage-in = 0 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . payload execution = 5222 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . stage-out = 2 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | . log creation = 0 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,160 | INFO     | ..............................
[2025-10-11 14:43:17] 2025-10-11 18:42:15,281 | INFO     | 
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | job summary report
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | --------------------------------------------------
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | PanDA job id: 6829376163
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | task id: 46376905
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | errors: (none)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | pilot state: finished 
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | transexitcode: 0
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | exeerrorcode: 0
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | exeerrordiag: 
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | exitcode: 0
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | exitmsg: OK
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | cpuconsumptiontime: 19680 s
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | nevents: 400
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | neventsw: 0
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | pid: 4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | pgrp: 4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | corecount: 8
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | event service: False
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | sizes: {0: 2347986, 1: 2348671, 2: 2348870, 12: 2348870, 23: 2348898, 34: 2348926, 42: 2349344, 45: 2349400, 5282: 2375724, 5287: 2384722, 5288: 2384778, 5324: 238
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | --------------------------------------------------
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | 
[2025-10-11 14:43:17] 2025-10-11 18:42:15,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,443 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,443 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,443 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:43:17] 2025-10-11 18:42:15,443 | INFO     | job 6829376163 has completed (purged errors)
[2025-10-11 14:43:17] 2025-10-11 18:42:15,443 | INFO     | overall cleanup function is called
[2025-10-11 14:43:17] 2025-10-11 18:42:16,450 | INFO     | --- collectZombieJob: --- 10, [4091923]
[2025-10-11 14:43:17] 2025-10-11 18:42:16,451 | INFO     | zombie collector waiting for pid 4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:16,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:43:17] 2025-10-11 18:42:16,451 | INFO     | collected zombie processes
[2025-10-11 14:43:17] 2025-10-11 18:42:16,451 | INFO     | will attempt to kill all subprocesses of pid=4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:19,479 | INFO     | process IDs to be killed: [4091923] (in reverse order)
[2025-10-11 14:43:17] 2025-10-11 18:42:20,219 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:43:17] 2025-10-11 18:42:20,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:43:17] 2025-10-11 18:42:20,313 | INFO     | did not find any defunct processes belonging to 4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:20,362 | INFO     | did not find any defunct processes belonging to 4091923
[2025-10-11 14:43:17] 2025-10-11 18:42:20,362 | INFO     | ready for new job
[2025-10-11 14:43:17] 2025-10-11 18:42:20,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:43:17] 2025-10-11 18:42:20,364 | INFO     | ***************************************
[2025-10-11 14:43:17] 2025-10-11 18:42:20,364 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 14:43:17] 2025-10-11 18:42:20,364 | INFO     | ***************************************
[2025-10-11 14:43:17] 2025-10-11 18:42:20,364 | INFO     | 
[2025-10-11 14:43:17] 2025-10-11 18:42:20,372 | INFO     | architecture information:
[2025-10-11 14:43:17] 2025-10-11 18:42:20,372 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:43:17] 2025-10-11 18:42:20,406 | INFO     | cat /etc/os-release:
[2025-10-11 14:43:17] NAME="CentOS Linux"
[2025-10-11 14:43:17] VERSION="7 (Core)"
[2025-10-11 14:43:17] ID="centos"
[2025-10-11 14:43:17] ID_LIKE="rhel fedora"
[2025-10-11 14:43:17] VERSION_ID="7"
[2025-10-11 14:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:43:17] ANSI_COLOR="0;31"
[2025-10-11 14:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:43:17] HOME_URL="https://www.centos.org/"
[2025-10-11 14:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:43:17] 
[2025-10-11 14:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:43:17] 
[2025-10-11 14:43:17] 2025-10-11 18:42:20,406 | INFO     | ***************************************
[2025-10-11 14:43:17] 2025-10-11 18:42:20,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 14:43:17] 2025-10-11 18:42:20,973 | INFO     | sufficient remaining disk space (72118960128 B)
[2025-10-11 14:43:17] 2025-10-11 18:42:20,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | INFO     | update_server=False
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:43:17] 2025-10-11 18:42:20,974 | INFO     | aborting loop
[2025-10-11 14:43:17] 2025-10-11 18:42:20,976 | INFO     | all data control threads have been joined
[2025-10-11 14:43:17] 2025-10-11 18:42:21,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:43:17] 2025-10-11 18:42:21,607 | INFO     | all payload control threads have been joined
[2025-10-11 14:43:17] 2025-10-11 18:42:21,981 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:21,981 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:21,982 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:21,982 | INFO     | [data] control thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,196 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,209 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,209 | INFO     | all job control threads have been joined
[2025-10-11 14:43:17] 2025-10-11 18:42:22,435 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,622 | INFO     | [payload] control thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,733 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,937 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,953 | INFO     | [job] validate thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:22,990 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:23,214 | INFO     | [job] control thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:23,243 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:23,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:25,027 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:43:17] 2025-10-11 18:42:48,315 | INFO     | PID=4069448 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:43:17] 2025-10-11 18:42:48,321 | INFO     | .. there are 118 such processes running
[2025-10-11 14:43:17] 2025-10-11 18:42:48,321 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:43:17] 2025-10-11 18:42:48,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:43:17] 2025-10-11 18:42:48,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:43:17] 2025-10-11 18:43:07,400 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:43:17] 2025-10-11 18:43:09,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950710306624)>', '<ExcThread(monitor, started 139950209091328)>']
[2025-10-11 14:43:17] 2025-10-11 18:43:09,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:43:17] 2025-10-11 18:43:09,463 | INFO     | [monitor] control thread has ended
[2025-10-11 14:43:17] 2025-10-11 18:43:14,220 | INFO     | all workflow threads have been joined
[2025-10-11 14:43:17] 2025-10-11 18:43:14,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:43:17] 2025-10-11 18:43:14,221 | INFO     | traces error code: 0
[2025-10-11 14:43:17] 2025-10-11 18:43:14,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:43:17] 2025-10-11 18:43:14,641 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:43:17] 2025-10-11 18:43:14,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:43:17] 2025-10-11 18:43:14,690 [wrapper] pilotpid: 4069448
[2025-10-11 14:43:17] 2025-10-11 18:43:14,726 [wrapper] Pilot exit status: 0
[2025-10-11 14:43:17] 2025-10-11 18:43:14,898 [wrapper] pandaids: 6829376163
[2025-10-11 14:43:17] 2025-10-11 18:43:16,535 [wrapper] cleanup supervisor_pilot  970304 4069449
[2025-10-11 14:43:17] 2025-10-11 18:43:16,555 [wrapper] Test setup, not cleaning
[2025-10-11 14:43:17] 2025-10-11 18:43:16,578 [wrapper] apfmon messages muted
[2025-10-11 14:43:17] 2025-10-11 18:43:16,601 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:43:17] 2025-10-11 18:43:16,646 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:43:17]  *** Error codes and diagnostics ***
[2025-10-11 14:43:17]     "exeErrorCode": 0,
[2025-10-11 14:43:17]     "exeErrorDiag": "",
[2025-10-11 14:43:17]     "pilotErrorCode": 0,
[2025-10-11 14:43:17]     "pilotErrorDiag": "",
[2025-10-11 14:43:17]  *** Listing of results directory ***
[2025-10-11 14:43:17] total 389724
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 03:03 pilot3.tar.gz
[2025-10-11 14:43:17] -rwx------. 1 boincer umatlas     36292 Oct  4 03:08 runpilot2-wrapper.sh
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 03:08 queuedata.json
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:43:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:10 run_atlas
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:10 job.xml
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas 212043519 Oct 11 13:10 EVNT.46376901._001954.pool.root.1
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:10 start_atlas.sh
[2025-10-11 14:43:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:10 shared
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas    565593 Oct 11 13:10 input.tar.gz
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:10 boinc_lockfile
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas      2518 Oct 11 13:10 pandaJob.out
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas    975512 Oct 11 13:11 agis_schedconf.cvmfs.json
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:11 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:43:17] drwx------. 4 boincer umatlas      4096 Oct 11 13:11 pilot3
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas      7159 Oct 11 14:40 init_data.xml
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas 181131134 Oct 11 14:40 HITS.46376905._054786.pool.root.1
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas       530 Oct 11 14:40 boinc_task_state.xml
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas      1039 Oct 11 14:41 memory_monitor_summary.json
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas    318216 Oct 11 14:41 log.46376905._054786.job.log.tgz.1
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas        95 Oct 11 14:42 pilot_heartbeat.json
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas      7786 Oct 11 14:42 heartbeat.json
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas      4825 Oct 11 14:43 pilotlog.txt
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 14:43 boinc_mmap_file
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas        27 Oct 11 14:43 wrapper_checkpoint.txt
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas    685303 Oct 11 14:43 log.46376905._054786.job.log.1
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas       357 Oct 11 14:43 output.list
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas       620 Oct 11 14:43 runtime_log
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas   1024000 Oct 11 14:43 result.tar.gz
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas       651 Oct 11 14:43 YFlMDmXYBP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvYKNDmDOyZxn.diag
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 14:43 runtime_log.err
[2025-10-11 14:43:17] -rw-r--r--. 1 boincer umatlas     22386 Oct 11 14:43 stderr.txt
[2025-10-11 14:43:17] HITS file was successfully produced:
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas 181131134 Oct 11 14:40 shared/HITS.pool.root.1
[2025-10-11 14:43:17]  *** Contents of shared directory: ***
[2025-10-11 14:43:17] total 385544
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas 212043519 Oct 11 13:10 ATLAS.root_0
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:10 start_atlas.sh
[2025-10-11 14:43:17] -rw-r--r--. 2 boincer umatlas    565593 Oct 11 13:10 input.tar.gz
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas 181131134 Oct 11 14:40 HITS.pool.root.1
[2025-10-11 14:43:17] -rw-------. 1 boincer umatlas   1024000 Oct 11 14:43 result.tar.gz
14:43:18 (4058992): run_atlas exited; CPU time 19859.416627
14:43:18 (4058992): called boinc_finish(0)

</stderr_txt>
]]>

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