Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:58 (14602): wrapper (7.7.26015): starting
13:00:58 (14602): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:00:58] Arguments: --nthreads 12
[2025-10-11 13:00:58] Threads: 12
[2025-10-11 13:00:58] Checking for CVMFS
[2025-10-11 13:00:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:00:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:00:59] 2.11.2.0 2991 221668 98412 151590 3 59 13280662 20275200 1 130560 1 108038318 99.983 13415854 12446 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 13:00:59] CVMFS is ok
[2025-10-11 13:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:00:59] Further information can be found at the LHC@home message board.
[2025-10-11 13:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:00:59] Checking for apptainer binary...
[2025-10-11 13:00:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:00:59] Running /usr/bin/apptainer --version
[2025-10-11 13:00:59] apptainer version 1.3.2-1.el7
[2025-10-11 13:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:01:00] c-205-32.aglt2.org
[2025-10-11 13:01:00] apptainer works
[2025-10-11 13:01:00] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:01:00] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:01:00] Starting ATLAS job with PandaID=6827992817
[2025-10-11 13:01:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:06:26]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:06:26]  storage_token=
[2025-10-11 14:06:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6827992817/log.46376905._038855.job.log.tgz.1
[2025-10-11 14:06:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/50/log.46376905._038855.job.log.tgz.1
[2025-10-11 14:06:26]  workdir=None
[2025-10-11 14:06:26] ]
[2025-10-11 14:06:26] 2025-10-11 18:05:26,946 | INFO     | transferring file log.46376905._038855.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6827992817/log.46376905._038855.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 14:06:26] 2025-10-11 18:05:26,946 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6827992817/log.46376905._038855.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._038855.job
[2025-10-11 14:06:26] 2025-10-11 18:05:26,969 | INFO     | adding to output.list: log.46376905._038855.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/50/log.46376905._038855.job.log.tg
[2025-10-11 14:06:26] 2025-10-11 18:05:26,970 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 14:06:26] 2025-10-11 18:05:26,970 | INFO     | summary of transferred files:
[2025-10-11 14:06:26] 2025-10-11 18:05:26,970 | INFO     |  -- lfn=log.46376905._038855.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 14:06:26] 2025-10-11 18:05:26,970 | INFO     | stage-out finished correctly
[2025-10-11 14:06:26] 2025-10-11 18:05:27,554 | WARNING  | process 24820 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 14:06:26] 2025-10-11 18:05:27,555 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6827992817/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:06:26] 2025-10-11 18:05:27,641 | INFO     | number of running child processes to parent process 24820: 1
[2025-10-11 14:06:26] 2025-10-11 18:05:27,642 | INFO     | maximum number of monitored processes: 6
[2025-10-11 14:06:26] 2025-10-11 18:05:28,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 14:06:26] 2025-10-11 18:05:28,591 | INFO     | job 6827992817 has state=finished
[2025-10-11 14:06:26] 2025-10-11 18:05:28,592 | INFO     | preparing for final server update for job 6827992817 in state='finished'
[2025-10-11 14:06:26] 2025-10-11 18:05:28,609 | INFO     | time since job start (3854s) is within the limit (172800.0s)
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | this job has now completed (state=finished)
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | log transfer has been attempted: DONE
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | job 6827992817 has finished - writing final server update
[2025-10-11 14:06:26] 2025-10-11 18:05:28,661 | INFO     | total number of processed events: 400 (read)
[2025-10-11 14:06:26] 2025-10-11 18:05:28,662 | INFO     | executing command: lscpu
[2025-10-11 14:06:26] 2025-10-11 18:05:28,689 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 14:06:26] 2025-10-11 18:05:30,144 | INFO     | monitor loop #286: job 0:6827992817 is in state 'finished'
[2025-10-11 14:06:26] 2025-10-11 18:05:30,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:06:26] 2025-10-11 18:05:30,614 | INFO     | time since job start (3856s) is within the limit (172800.0s)
[2025-10-11 14:06:26] 2025-10-11 18:05:32,619 | INFO     | time since job start (3858s) is within the limit (172800.0s)
[2025-10-11 14:06:26] 2025-10-11 18:05:32,647 | INFO     | monitor loop #287: job 0:6827992817 is in state 'finished'
[2025-10-11 14:06:26] 2025-10-11 18:05:32,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,273 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 14:06:26] 2025-10-11 18:05:33,277 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-11 14:06:26] 2025-10-11 18:05:33,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6827992817/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,280 | INFO     | extracted standard info from prmon json
[2025-10-11 14:06:26] 2025-10-11 18:05:33,280 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:06:26] 2025-10-11 18:05:33,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:06:26] 2025-10-11 18:05:33,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:06:26] 2025-10-11 18:05:33,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:06:26] 2025-10-11 18:05:33,282 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:06:26] 2025-10-11 18:05:33,282 | INFO     | sum of square deviations: 54438230.0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,282 | INFO     | sum of deviations: -1831037030.4999998
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | mean x: 1760204085.5
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | mean y: 2689937.3035714286
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | -- intersect: 59207386008.2061
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | intersect: 59207386008.2061
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | chi2: 0.037407246367536125
[2025-10-11 14:06:26] 2025-10-11 18:05:33,283 | INFO     | -- intersect: 59207386008.2061
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | current memory leak: -33.64 B/s (using 56 data points, chi2=0.04)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | ..............................
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | . Timing measurements:
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | . get job = 0 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,284 | INFO     | . initial setup = 2 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | . payload setup = 6 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | . stage-in = 0 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | . payload execution = 3824 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | . stage-out = 0 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | . log creation = 0 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,285 | INFO     | ..............................
[2025-10-11 14:06:26] 2025-10-11 18:05:33,368 | INFO     | 
[2025-10-11 14:06:26] 2025-10-11 18:05:33,368 | INFO     | job summary report
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | --------------------------------------------------
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | PanDA job id: 6827992817
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | task id: 46376905
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | errors: (none)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:06:26] 2025-10-11 18:05:33,369 | INFO     | pilot state: finished 
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | transexitcode: 0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | exeerrorcode: 0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | exeerrordiag: 
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | exitcode: 0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | exitmsg: OK
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | cpuconsumptiontime: 42111 s
[2025-10-11 14:06:26] 2025-10-11 18:05:33,370 | INFO     | nevents: 400
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | neventsw: 0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | pid: 24820
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | pgrp: 24820
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | corecount: 12
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | event service: False
[2025-10-11 14:06:26] 2025-10-11 18:05:33,371 | INFO     | sizes: {0: 2348644, 1: 2348843, 5: 2349105, 11: 2349161, 3834: 2374913, 3836: 2383911, 3838: 2384095, 3842: 2384289}
[2025-10-11 14:06:26] 2025-10-11 18:05:33,372 | INFO     | --------------------------------------------------
[2025-10-11 14:06:26] 2025-10-11 18:05:33,372 | INFO     | 
[2025-10-11 14:06:26] 2025-10-11 18:05:33,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 14:06:26] 2025-10-11 18:05:33,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:06:26] 2025-10-11 18:05:33,399 | INFO     | job 6827992817 has completed (purged errors)
[2025-10-11 14:06:26] 2025-10-11 18:05:33,399 | INFO     | overall cleanup function is called
[2025-10-11 14:06:26] 2025-10-11 18:05:33,738 | INFO     | PID=18451 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 14:06:26] 2025-10-11 18:05:34,406 | INFO     | --- collectZombieJob: --- 10, [24820]
[2025-10-11 14:06:26] 2025-10-11 18:05:34,406 | INFO     | zombie collector waiting for pid 24820
[2025-10-11 14:06:26] 2025-10-11 18:05:34,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:06:26] 2025-10-11 18:05:34,407 | INFO     | collected zombie processes
[2025-10-11 14:06:26] 2025-10-11 18:05:34,407 | INFO     | will attempt to kill all subprocesses of pid=24820
[2025-10-11 14:06:26] 2025-10-11 18:05:34,494 | INFO     | process IDs to be killed: [24820] (in reverse order)
[2025-10-11 14:06:26] 2025-10-11 18:05:34,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:06:26] 2025-10-11 18:05:34,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:06:26] 2025-10-11 18:05:34,547 | INFO     | did not find any defunct processes belonging to 24820
[2025-10-11 14:06:26] 2025-10-11 18:05:34,549 | INFO     | did not find any defunct processes belonging to 24820
[2025-10-11 14:06:26] 2025-10-11 18:05:34,549 | INFO     | ready for new job
[2025-10-11 14:06:26] 2025-10-11 18:05:34,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:06:26] 2025-10-11 18:05:34,550 | INFO     | ***************************************
[2025-10-11 14:06:26] 2025-10-11 18:05:34,551 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 14:06:26] 2025-10-11 18:05:34,551 | INFO     | ***************************************
[2025-10-11 14:06:26] 2025-10-11 18:05:34,551 | INFO     | 
[2025-10-11 14:06:26] 2025-10-11 18:05:34,551 | INFO     | architecture information:
[2025-10-11 14:06:26] 2025-10-11 18:05:34,552 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:06:26] 2025-10-11 18:05:34,565 | INFO     | cat /etc/os-release:
[2025-10-11 14:06:26] NAME="CentOS Linux"
[2025-10-11 14:06:26] VERSION="7 (Core)"
[2025-10-11 14:06:26] ID="centos"
[2025-10-11 14:06:26] ID_LIKE="rhel fedora"
[2025-10-11 14:06:26] VERSION_ID="7"
[2025-10-11 14:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:06:26] ANSI_COLOR="0;31"
[2025-10-11 14:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:06:26] HOME_URL="https://www.centos.org/"
[2025-10-11 14:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:06:26] 
[2025-10-11 14:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:06:26] 
[2025-10-11 14:06:26] 2025-10-11 18:05:34,566 | INFO     | ***************************************
[2025-10-11 14:06:26] 2025-10-11 18:05:35,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 14:06:26] 2025-10-11 18:05:35,100 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-10-11 14:06:26] 2025-10-11 18:05:35,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:06:26] 2025-10-11 18:05:35,101 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:06:26] 2025-10-11 18:05:35,101 | INFO     | update_server=False
[2025-10-11 14:06:26] 2025-10-11 18:05:35,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:06:26] 2025-10-11 18:05:35,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:06:26] 2025-10-11 18:05:35,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:06:26] 2025-10-11 18:05:35,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:06:26] 2025-10-11 18:05:35,151 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 14:06:26] 2025-10-11 18:05:35,151 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 14:06:26] 2025-10-11 18:05:35,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:06:26] 2025-10-11 18:05:35,151 | INFO     | will abort loop
[2025-10-11 14:06:26] 2025-10-11 18:05:35,629 | INFO     | all job control threads have been joined
[2025-10-11 14:06:26] 2025-10-11 18:05:35,925 | INFO     | all payload control threads have been joined
[2025-10-11 14:06:26] 2025-10-11 18:05:36,107 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,107 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,157 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,180 | INFO     | all data control threads have been joined
[2025-10-11 14:06:26] 2025-10-11 18:05:36,326 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,637 | INFO     | [job] control thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,833 | INFO     | [job] validate thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:36,931 | INFO     | [payload] control thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,108 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,185 | INFO     | [data] control thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,188 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,393 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:37,508 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:05:39,107 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:06:26] 2025-10-11 18:06:05,939 | INFO     | PID=18451 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 14:06:26] 2025-10-11 18:06:05,940 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:06:26] 2025-10-11 18:06:05,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:06:26] 2025-10-11 18:06:05,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:06:26] 2025-10-11 18:06:20,323 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:06:26] 2025-10-11 18:06:21,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355495466816)>', '<ExcThread(monitor, started 140355194300160)>']
[2025-10-11 14:06:26] 2025-10-11 18:06:22,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:06:26] 2025-10-11 18:06:22,013 | INFO     | [monitor] control thread has ended
[2025-10-11 14:06:26] 2025-10-11 18:06:26,354 | INFO     | all workflow threads have been joined
[2025-10-11 14:06:26] 2025-10-11 18:06:26,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:06:26] 2025-10-11 18:06:26,355 | INFO     | traces error code: 0
[2025-10-11 14:06:26] 2025-10-11 18:06:26,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:06:26] 2025-10-11 18:06:26,446 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:06:26] 2025-10-11 18:06:26,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:06:26] 2025-10-11 18:06:26,453 [wrapper] pilotpid: 18451
[2025-10-11 14:06:26] 2025-10-11 18:06:26,456 [wrapper] Pilot exit status: 0
[2025-10-11 14:06:26] 2025-10-11 18:06:26,471 [wrapper] pandaids: 6827992817
[2025-10-11 14:06:26] 2025-10-11 18:06:26,513 [wrapper] cleanup supervisor_pilot 27833 18452
[2025-10-11 14:06:26] 2025-10-11 18:06:26,517 [wrapper] Test setup, not cleaning
[2025-10-11 14:06:26] 2025-10-11 18:06:26,521 [wrapper] apfmon messages muted
[2025-10-11 14:06:26] 2025-10-11 18:06:26,524 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:06:26] 2025-10-11 18:06:26,528 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:06:26]  *** Error codes and diagnostics ***
[2025-10-11 14:06:26]     "exeErrorCode": 0,
[2025-10-11 14:06:26]     "exeErrorDiag": "",
[2025-10-11 14:06:26]     "pilotErrorCode": 0,
[2025-10-11 14:06:26]     "pilotErrorDiag": "",
[2025-10-11 14:06:26]  *** Listing of results directory ***
[2025-10-11 14:06:26] total 396656
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas    552446 Oct  3 02:00 pilot3.tar.gz
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas      5112 Oct  3 02:12 queuedata.json
[2025-10-11 14:06:26] -rwx------ 1 boincer umatlas     36292 Oct  3 02:13 runpilot2-wrapper.sh
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas       100 Oct 11 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:06:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 13:00 run_atlas
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas       105 Oct 11 13:00 job.xml
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas 216952256 Oct 11 13:00 EVNT.46376901._001321.pool.root.1
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:00 start_atlas.sh
[2025-10-11 14:06:26] drwxrwx--x 2 boincer umatlas      4096 Oct 11 13:00 shared
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas    565602 Oct 11 13:00 input.tar.gz
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas         0 Oct 11 13:00 boinc_lockfile
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas      2518 Oct 11 13:01 pandaJob.out
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas    975512 Oct 11 13:01 agis_schedconf.cvmfs.json
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas   1560580 Oct 11 13:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:06:26] drwx------ 4 boincer umatlas      4096 Oct 11 13:01 pilot3
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas      5953 Oct 11 14:03 init_data.xml
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas       530 Oct 11 14:04 boinc_task_state.xml
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas 183469883 Oct 11 14:04 HITS.46376905._038855.pool.root.1
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas      1048 Oct 11 14:05 memory_monitor_summary.json
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas    364584 Oct 11 14:05 log.46376905._038855.job.log.tgz.1
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas      7851 Oct 11 14:05 heartbeat.json
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas        95 Oct 11 14:06 pilot_heartbeat.json
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas        27 Oct 11 14:06 wrapper_checkpoint.txt
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 14:06 boinc_mmap_file
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas      4932 Oct 11 14:06 pilotlog.txt
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas    564619 Oct 11 14:06 log.46376905._038855.job.log.1
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas       357 Oct 11 14:06 output.list
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas       620 Oct 11 14:06 runtime_log
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas    952320 Oct 11 14:06 result.tar.gz
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 14:06 runtime_log.err
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas       659 Oct 11 14:06 k8SNDmZDoO8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7wAMDmqJ6Dln.diag
[2025-10-11 14:06:26] -rw-r--r-- 1 boincer umatlas     22298 Oct 11 14:06 stderr.txt
[2025-10-11 14:06:26] HITS file was successfully produced:
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas 183469883 Oct 11 14:04 shared/HITS.pool.root.1
[2025-10-11 14:06:26]  *** Contents of shared directory: ***
[2025-10-11 14:06:26] total 392548
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas 216952256 Oct 11 13:00 ATLAS.root_0
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 13:00 start_atlas.sh
[2025-10-11 14:06:26] -rw-r--r-- 2 boincer umatlas    565602 Oct 11 13:00 input.tar.gz
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas 183469883 Oct 11 14:04 HITS.pool.root.1
[2025-10-11 14:06:26] -rw------- 1 boincer umatlas    952320 Oct 11 14:06 result.tar.gz
14:06:28 (14602): run_atlas exited; CPU time 42086.470225
14:06:28 (14602): called boinc_finish(0)

</stderr_txt>
]]>

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