Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:13 (2766873): wrapper (7.7.26015): starting
01:20:13 (2766873): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 01:20:13] Arguments: --nthreads 4
[2025-10-13 01:20:13] Threads: 4
[2025-10-13 01:20:13] Checking for CVMFS
[2025-10-13 01:20:13] No cvmfs_config command found, will try listing directly
[2025-10-13 01:20:13] CVMFS is ok
[2025-10-13 01:20:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:20:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:20:13] Further information can be found at the LHC@home message board.
[2025-10-13 01:20:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:20:13] Checking for apptainer binary...
[2025-10-13 01:20:13] which: no apptainer in ((null))
[2025-10-13 01:20:13] apptainer is not installed, using version from CVMFS
[2025-10-13 01:20:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:20:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-13 01:20:13] apptainer works
[2025-10-13 01:20:13] Set ATHENA_PROC_NUMBER=4
[2025-10-13 01:20:13] Set ATHENA_CORE_NUMBER=4
[2025-10-13 01:20:13] Starting ATLAS job with PandaID=6838364999
[2025-10-13 01:20:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:11:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:11:53] 2025-10-13 01:46:12,132 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:11:53] 2025-10-13 01:46:12,153 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2717.563031250001
[2025-10-13 04:11:53] 2025-10-13 01:46:12,177 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6838364999/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,177 | INFO     | extracted standard info from prmon json
[2025-10-13 04:11:53] 2025-10-13 01:46:12,178 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:11:53] 2025-10-13 01:46:12,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:11:53] 2025-10-13 01:46:12,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:11:53] 2025-10-13 01:46:12,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:11:53] 2025-10-13 01:46:12,181 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:11:53] 2025-10-13 01:46:12,181 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | sum of deviations: 139551774.00000277
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | mean x: 1760315593.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | mean y: 2354380.006993007
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | -- intersect: -268577805.158092
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | intersect: -268577805.158092
[2025-10-13 04:11:53] 2025-10-13 01:46:12,182 | INFO     | chi2: 1.3548550895353277
[2025-10-13 04:11:53] 2025-10-13 01:46:12,183 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 04:11:53] 2025-10-13 01:46:12,183 | INFO     | sum of deviations: 535759919.50000083
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | mean x: 1760315440.5
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | mean y: 2355038.5434782607
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | -- intersect: -1155003290.051553
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | intersect: -1155003290.051553
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | chi2: 1.3559939505834204
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | current chi2=1.3559939505834204 (change=-0.08405777539524767 %)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,184 | INFO     | right removable region: 137
[2025-10-13 04:11:53] 2025-10-13 01:46:12,185 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 04:11:53] 2025-10-13 01:46:12,185 | INFO     | sum of deviations: -16958368135.000004
[2025-10-13 04:11:53] 2025-10-13 01:46:12,185 | INFO     | mean x: 1760315745.5
[2025-10-13 04:11:53] 2025-10-13 01:46:12,185 | INFO     | mean y: 2382201.3333333335
[2025-10-13 04:11:53] 2025-10-13 01:46:12,186 | INFO     | -- intersect: 36636164025.44638
[2025-10-13 04:11:53] 2025-10-13 01:46:12,186 | INFO     | intersect: 36636164025.44638
[2025-10-13 04:11:53] 2025-10-13 01:46:12,186 | INFO     | chi2: 0.03609972444130872
[2025-10-13 04:11:53] 2025-10-13 01:46:12,186 | INFO     | current chi2=0.03609972444130872 (change=97.33552874251002 %)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,186 | INFO     | sum of square deviations: 729472282.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,187 | INFO     | sum of deviations: -16005163530.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,187 | INFO     | mean x: 1760315898.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,187 | INFO     | mean y: 2380492.248120301
[2025-10-13 04:11:53] 2025-10-13 01:46:12,187 | INFO     | -- intersect: 38625018400.71467
[2025-10-13 04:11:53] 2025-10-13 01:46:12,187 | INFO     | intersect: 38625018400.71467
[2025-10-13 04:11:53] 2025-10-13 01:46:12,188 | INFO     | chi2: 0.03457854731021686
[2025-10-13 04:11:53] 2025-10-13 01:46:12,188 | INFO     | current chi2=0.03457854731021686 (change=4.213819231681402 %)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,188 | INFO     | left removable region: 20
[2025-10-13 04:11:53] 2025-10-13 01:46:12,188 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | sum of deviations: -12437602930.000002
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | mean x: 1760316020.0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | mean y: 2377084.905982906
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | -- intersect: 44090645996.79092
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | intersect: 44090645996.79092
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | chi2: 0.0315202684752334
[2025-10-13 04:11:53] 2025-10-13 01:46:12,189 | INFO     | -- intersect: 44090645996.79092
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | current memory leak: -25.05 B/s (using 117 data points, chi2=0.03)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | could have reported an average CPU frequency of 2735 MHz (8 samples)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | ..............................
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | . Timing measurements:
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | . get job = 0 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | . initial setup = 1 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | . payload setup = 8 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,190 | INFO     | . stage-in = 0 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,191 | INFO     | . payload execution = 8704 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,191 | INFO     | . stage-out = 0 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,191 | INFO     | . log creation = 0 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,191 | INFO     | ..............................
[2025-10-13 04:11:53] 2025-10-13 01:46:12,287 | INFO     | 
[2025-10-13 04:11:53] 2025-10-13 01:46:12,287 | INFO     | job summary report
[2025-10-13 04:11:53] 2025-10-13 01:46:12,287 | INFO     | --------------------------------------------------
[2025-10-13 04:11:53] 2025-10-13 01:46:12,287 | INFO     | PanDA job id: 6838364999
[2025-10-13 04:11:53] 2025-10-13 01:46:12,287 | INFO     | task id: 46676269
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | errors: (none)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | pilot state: finished 
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | transexitcode: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | exeerrorcode: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | exeerrordiag: 
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | exitcode: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | exitmsg: OK
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | cpuconsumptiontime: 33457 s
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | nevents: 400
[2025-10-13 04:11:53] 2025-10-13 01:46:12,288 | INFO     | neventsw: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | pid: 2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | pgrp: 2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | corecount: 4
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | event service: False
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | sizes: {0: 2348698, 1: 2348897, 7: 2349159, 11: 2349187, 8716: 2377663, 8718: 2386869, 8727: 2387007}
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | --------------------------------------------------
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | 
[2025-10-13 04:11:53] 2025-10-13 01:46:12,289 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-10-13 04:11:53] 2025-10-13 01:46:12,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:11:53] 2025-10-13 01:46:12,322 | INFO     | job 6838364999 has completed (purged errors)
[2025-10-13 04:11:53] 2025-10-13 01:46:12,322 | INFO     | overall cleanup function is called
[2025-10-13 04:11:53] 2025-10-13 01:46:13,331 | INFO     | --- collectZombieJob: --- 10, [2800645]
[2025-10-13 04:11:53] 2025-10-13 01:46:13,331 | INFO     | zombie collector waiting for pid 2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:13,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:11:53] 2025-10-13 01:46:13,331 | INFO     | collected zombie processes
[2025-10-13 04:11:53] 2025-10-13 01:46:13,332 | INFO     | will attempt to kill all subprocesses of pid=2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:14,096 | INFO     | process IDs to be killed: [2800645] (in reverse order)
[2025-10-13 04:11:53] 2025-10-13 01:46:14,348 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:11:53] 2025-10-13 01:46:14,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:11:53] 2025-10-13 01:46:14,379 | INFO     | did not find any defunct processes belonging to 2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:14,409 | INFO     | did not find any defunct processes belonging to 2800645
[2025-10-13 04:11:53] 2025-10-13 01:46:14,409 | INFO     | ready for new job
[2025-10-13 04:11:53] 2025-10-13 01:46:14,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:11:53] 2025-10-13 01:46:14,412 | INFO     | ***************************************
[2025-10-13 04:11:53] 2025-10-13 01:46:14,412 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:11:53] 2025-10-13 01:46:14,412 | INFO     | ***************************************
[2025-10-13 04:11:53] 2025-10-13 01:46:14,412 | INFO     | 
[2025-10-13 04:11:53] 2025-10-13 01:46:14,420 | INFO     | architecture information:
[2025-10-13 04:11:53] 2025-10-13 01:46:14,421 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:11:53] 2025-10-13 01:46:14,443 | INFO     | cat /etc/os-release:
[2025-10-13 04:11:53] NAME="CentOS Linux"
[2025-10-13 04:11:53] VERSION="7 (Core)"
[2025-10-13 04:11:53] ID="centos"
[2025-10-13 04:11:53] ID_LIKE="rhel fedora"
[2025-10-13 04:11:53] VERSION_ID="7"
[2025-10-13 04:11:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:11:53] ANSI_COLOR="0;31"
[2025-10-13 04:11:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:11:53] HOME_URL="https://www.centos.org/"
[2025-10-13 04:11:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:11:53] 
[2025-10-13 04:11:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:11:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:11:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:11:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:11:53] 
[2025-10-13 04:11:53] 2025-10-13 01:46:14,444 | INFO     | ***************************************
[2025-10-13 04:11:53] 2025-10-13 01:46:14,947 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-10-13 04:11:53] 2025-10-13 01:46:14,970 | INFO     | sufficient remaining disk space (3334213730304 B)
[2025-10-13 04:11:53] 2025-10-13 01:46:14,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:11:53] 2025-10-13 01:46:14,971 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:11:53] 2025-10-13 01:46:14,971 | INFO     | update_server=False
[2025-10-13 04:11:53] 2025-10-13 01:46:14,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:11:53] 2025-10-13 01:46:14,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:11:53] 2025-10-13 01:46:14,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:11:53] 2025-10-13 01:46:15,266 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:11:53] 2025-10-13 01:46:15,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:11:53] 2025-10-13 01:46:15,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:11:53] 2025-10-13 01:46:15,267 | INFO     | will abort loop
[2025-10-13 04:11:53] 2025-10-13 01:46:15,649 | INFO     | all data control threads have been joined
[2025-10-13 04:11:53] 2025-10-13 01:46:15,977 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,038 | INFO     | all payload control threads have been joined
[2025-10-13 04:11:53] 2025-10-13 01:46:16,065 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,115 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,269 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,461 | INFO     | all job control threads have been joined
[2025-10-13 04:11:53] 2025-10-13 01:46:16,655 | INFO     | [data] control thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,716 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,856 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:16,973 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:17,039 | INFO     | [payload] control thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:17,047 | INFO     | [job] validate thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:17,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:11:53] 2025-10-13 01:46:17,347 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:17,352 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:17,467 | INFO     | [job] control thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:18,303 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:18,978 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:25,486 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:11:53] 2025-10-13 01:46:26,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:11:53] 2025-10-13 01:46:40,701 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:11:53] 2025-10-13 01:46:40,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22453369505600)>', '<ExcThread(monitor, started 22453128488704)>']
[2025-10-13 04:11:53] 2025-10-13 01:46:45,811 | INFO     | PID=2777222 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 04:11:53] 2025-10-13 01:46:45,812 | INFO     | .. there are 9 such processes running
[2025-10-13 04:11:53] 2025-10-13 01:46:45,812 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:11:53] 2025-10-13 01:46:45,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:11:53] 2025-10-13 01:46:45,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:11:53] 2025-10-13 01:46:45,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:11:53] 2025-10-13 01:46:45,813 | INFO     | [monitor] control thread has ended
[2025-10-13 04:11:53] 2025-10-13 01:46:45,885 | INFO     | all workflow threads have been joined
[2025-10-13 04:11:53] 2025-10-13 01:46:45,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:11:53] 2025-10-13 01:46:45,886 | INFO     | traces error code: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:45,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:11:53] 2025-10-13 01:46:46,034 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:11:53] 2025-10-13 01:46:46,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:11:53] 2025-10-13 01:46:46,041 [wrapper] pilotpid: 2777222
[2025-10-13 04:11:53] 2025-10-13 01:46:46,045 [wrapper] Pilot exit status: 0
[2025-10-13 04:11:53] 2025-10-13 01:46:46,064 [wrapper] pandaids: 6838364999
[2025-10-13 04:11:53] 2025-10-13 01:46:46,236 [wrapper] cleanup supervisor_pilot 3106734 2777223
[2025-10-13 04:11:53] 2025-10-13 01:46:46,240 [wrapper] Test setup, not cleaning
[2025-10-13 04:11:53] 2025-10-13 01:46:46,244 [wrapper] apfmon messages muted
[2025-10-13 04:11:53] 2025-10-13 01:46:46,248 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:11:53] 2025-10-13 01:46:46,252 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:11:53]  *** Error codes and diagnostics ***
[2025-10-13 04:11:53]     "exeErrorCode": 0,
[2025-10-13 04:11:53]     "exeErrorDiag": "",
[2025-10-13 04:11:53]     "pilotErrorCode": 0,
[2025-10-13 04:11:53]     "pilotErrorDiag": "",
[2025-10-13 04:11:53]  *** Listing of results directory ***
[2025-10-13 04:11:53] total 413228
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc    557409 Oct 11 13:04 pilot3.tar.gz
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc      5112 Oct 11 13:14 queuedata.json
[2025-10-13 04:11:53] -rwx------ 1 boinc boinc     36292 Oct 11 13:15 runpilot2-wrapper.sh
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:11:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:20 run_atlas
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:20 job.xml
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc 222682615 Oct 13 01:20 EVNT.46676267._002264.pool.root.1
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc      6688 Oct 13 01:20 init_data.xml
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:20 start_atlas.sh
[2025-10-13 04:11:53] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:20 shared
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc    569679 Oct 13 01:20 input.tar.gz
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:20 boinc_lockfile
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:20 pandaJob.out
[2025-10-13 04:11:53] -rw------- 1 boinc boinc    975603 Oct 13 01:20 agis_schedconf.cvmfs.json
[2025-10-13 04:11:53] -rw------- 1 boinc boinc   1560580 Oct 13 01:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:11:53] drwx------ 5 boinc boinc      4096 Oct 13 01:20 pilot3
[2025-10-13 04:11:53] -rw------- 1 boinc boinc 193419411 Oct 13 03:45 HITS.46676269._056531.pool.root.1
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc       527 Oct 13 03:45 boinc_task_state.xml
[2025-10-13 04:11:53] -rw------- 1 boinc boinc      1026 Oct 13 03:45 memory_monitor_summary.json
[2025-10-13 04:11:53] -rw------- 1 boinc boinc    338430 Oct 13 03:46 log.46676269._056531.job.log.tgz.1
[2025-10-13 04:11:53] -rw------- 1 boinc boinc      7788 Oct 13 03:46 heartbeat.json
[2025-10-13 04:11:53] -rw------- 1 boinc boinc        95 Oct 13 03:46 pilot_heartbeat.json
[2025-10-13 04:11:53] -rw------- 1 boinc boinc      5094 Oct 13 03:46 pilotlog.txt
[2025-10-13 04:11:53] -rw------- 1 boinc boinc   1232689 Oct 13 03:46 log.46676269._056531.job.log.1
[2025-10-13 04:11:53] -rw------- 1 boinc boinc       357 Oct 13 03:46 output.list
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:46 runtime_log
[2025-10-13 04:11:53] -rw------- 1 boinc boinc   1587200 Oct 13 03:46 result.tar.gz
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc      9084 Oct 13 03:46 runtime_log.err
[2025-10-13 04:11:53] -rw------- 1 boinc boinc       662 Oct 13 03:46 AMHKDm3kmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPGgNDmdqjoWn.diag
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc        25 Oct 13 04:11 wrapper_checkpoint.txt
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:11 boinc_mmap_file
[2025-10-13 04:11:53] -rw-r--r-- 1 boinc boinc     20857 Oct 13 04:11 stderr.txt
[2025-10-13 04:11:53] HITS file was successfully produced:
[2025-10-13 04:11:53] -rw------- 1 boinc boinc 193419411 Oct 13 03:45 shared/HITS.pool.root.1
[2025-10-13 04:11:53]  *** Contents of shared directory: ***
[2025-10-13 04:11:53] total 408488
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc 222682615 Oct 13 01:20 ATLAS.root_0
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:20 start_atlas.sh
[2025-10-13 04:11:53] -rw-r--r-- 2 boinc boinc    569679 Oct 13 01:20 input.tar.gz
[2025-10-13 04:11:53] -rw------- 1 boinc boinc 193419411 Oct 13 03:45 HITS.pool.root.1
[2025-10-13 04:11:53] -rw------- 1 boinc boinc   1587200 Oct 13 03:46 result.tar.gz
04:11:54 (2766873): run_atlas exited; CPU time 34059.629843
04:11:54 (2766873): called boinc_finish(0)

</stderr_txt>
]]>

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