Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:45 (2800619): wrapper (7.7.26015): starting
15:31:45 (2800619): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 15:31:45] Arguments: --nthreads 8
[2025-10-11 15:31:45] Threads: 8
[2025-10-11 15:31:45] Checking for CVMFS
[2025-10-11 15:31:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 15:31:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 15:31:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 15:31:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 15:31:46] 2.13.2.0 130249 116561 89108 151594 2 273 22569582 40960001 9024 16776704 1 78375220 99.734 52130994 31368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 15:31:46] CVMFS is ok
[2025-10-11 15:31:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 15:31:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 15:31:46] Further information can be found at the LHC@home message board.
[2025-10-11 15:31:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 15:31:46] Checking for apptainer binary...
[2025-10-11 15:31:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 15:31:46] Running /usr/bin/apptainer --version
[2025-10-11 15:31:46] apptainer version 1.4.3-1.el9
[2025-10-11 15:31:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 15:31:47] c-211-6.aglt2.org
[2025-10-11 15:31:47] apptainer works
[2025-10-11 15:31:47] Set ATHENA_PROC_NUMBER=8
[2025-10-11 15:31:47] Set ATHENA_CORE_NUMBER=8
[2025-10-11 15:31:47] Starting ATLAS job with PandaID=6838365155
[2025-10-11 15:31:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:59:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:59:11] 2025-10-12 01:58:21,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:59:11] 2025-10-12 01:58:21,691 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:59:11] 2025-10-12 01:58:21,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:59:11] 2025-10-12 01:58:21,701 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:59:11] 2025-10-12 01:58:21,702 | INFO     | sum of square deviations: 16881689704.49611
[2025-10-11 21:59:11] 2025-10-12 01:58:21,708 | INFO     | sum of deviations: 41339944057.255875
[2025-10-11 21:59:11] 2025-10-12 01:58:21,708 | INFO     | mean x: 1760222745.6939313
[2025-10-11 21:59:11] 2025-10-12 01:58:21,708 | INFO     | mean y: 2492666.4591029026
[2025-10-11 21:59:11] 2025-10-12 01:58:21,709 | INFO     | -- intersect: -4307947290.029154
[2025-10-11 21:59:11] 2025-10-12 01:58:21,709 | INFO     | intersect: -4307947290.029154
[2025-10-11 21:59:11] 2025-10-12 01:58:21,710 | INFO     | chi2: 5.824617132535827
[2025-10-11 21:59:11] 2025-10-12 01:58:21,710 | INFO     | sum of square deviations: 16222413505.959997
[2025-10-11 21:59:11] 2025-10-12 01:58:21,715 | INFO     | sum of deviations: 92570106882.2193
[2025-10-11 21:59:11] 2025-10-12 01:58:21,716 | INFO     | mean x: 1760222593.2005348
[2025-10-11 21:59:11] 2025-10-12 01:58:21,716 | INFO     | mean y: 2504420.9037433155
[2025-10-11 21:59:11] 2025-10-12 01:58:21,716 | INFO     | -- intersect: -10041869896.715906
[2025-10-11 21:59:11] 2025-10-12 01:58:21,716 | INFO     | intersect: -10041869896.715906
[2025-10-11 21:59:11] 2025-10-12 01:58:21,717 | INFO     | chi2: 4.228295620563542
[2025-10-11 21:59:11] 2025-10-12 01:58:21,717 | INFO     | current chi2=4.228295620563542 (change=27.40646253047888 %)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,718 | INFO     | sum of square deviations: 15580555795.972944
[2025-10-11 21:59:11] 2025-10-12 01:58:21,723 | INFO     | sum of deviations: 91210243501.9918
[2025-10-11 21:59:11] 2025-10-12 01:58:21,724 | INFO     | mean x: 1760222440.7100272
[2025-10-11 21:59:11] 2025-10-12 01:58:21,724 | INFO     | mean y: 2504097.81300813
[2025-10-11 21:59:11] 2025-10-12 01:58:21,724 | INFO     | -- intersect: -10302026724.914694
[2025-10-11 21:59:11] 2025-10-12 01:58:21,724 | INFO     | intersect: -10302026724.914694
[2025-10-11 21:59:11] 2025-10-12 01:58:21,725 | INFO     | chi2: 4.230465074595072
[2025-10-11 21:59:11] 2025-10-12 01:58:21,725 | INFO     | current chi2=4.230465074595072 (change=-0.051308002708686525 %)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,726 | INFO     | right removable region: 368
[2025-10-11 21:59:11] 2025-10-12 01:58:21,726 | INFO     | sum of square deviations: 16222276194.556234
[2025-10-11 21:59:11] 2025-10-12 01:58:21,731 | INFO     | sum of deviations: -72890906019.20319
[2025-10-11 21:59:11] 2025-10-12 01:58:21,732 | INFO     | mean x: 1760222898.2032084
[2025-10-11 21:59:11] 2025-10-12 01:58:21,732 | INFO     | mean y: 2519050.002673797
[2025-10-11 21:59:11] 2025-10-12 01:58:21,732 | INFO     | -- intersect: 7911658329.041397
[2025-10-11 21:59:11] 2025-10-12 01:58:21,732 | INFO     | intersect: 7911658329.041397
[2025-10-11 21:59:11] 2025-10-12 01:58:21,733 | INFO     | chi2: 2.4328980992883067
[2025-10-11 21:59:11] 2025-10-12 01:58:21,733 | INFO     | current chi2=2.4328980992883067 (change=58.23076360335617 %)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,734 | INFO     | sum of square deviations: 15580258359.54999
[2025-10-11 21:59:11] 2025-10-12 01:58:21,739 | INFO     | sum of deviations: -106312094798.34694
[2025-10-11 21:59:11] 2025-10-12 01:58:21,739 | INFO     | mean x: 1760223050.712737
[2025-10-11 21:59:11] 2025-10-12 01:58:21,740 | INFO     | mean y: 2526959.3929539295
[2025-10-11 21:59:11] 2025-10-12 01:58:21,740 | INFO     | -- intersect: 12013431754.107346
[2025-10-11 21:59:11] 2025-10-12 01:58:21,740 | INFO     | intersect: 12013431754.107346
[2025-10-11 21:59:11] 2025-10-12 01:58:21,741 | INFO     | chi2: 2.0512040818956576
[2025-10-11 21:59:11] 2025-10-12 01:58:21,741 | INFO     | current chi2=2.0512040818956576 (change=15.688861670955543 %)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,741 | INFO     | left removable region: 20
[2025-10-11 21:59:11] 2025-10-12 01:58:21,742 | INFO     | sum of square deviations: 13068848333.25
[2025-10-11 21:59:11] 2025-10-12 01:58:21,746 | INFO     | sum of deviations: -48212734932.25
[2025-10-11 21:59:11] 2025-10-12 01:58:21,747 | INFO     | mean x: 1760223020.25
[2025-10-11 21:59:11] 2025-10-12 01:58:21,747 | INFO     | mean y: 2538150.0948275863
[2025-10-11 21:59:11] 2025-10-12 01:58:21,747 | INFO     | -- intersect: 6496237038.698675
[2025-10-11 21:59:11] 2025-10-12 01:58:21,747 | INFO     | intersect: 6496237038.698675
[2025-10-11 21:59:11] 2025-10-12 01:58:21,748 | INFO     | chi2: 0.32788821235312093
[2025-10-11 21:59:11] 2025-10-12 01:58:21,748 | INFO     | -- intersect: 6496237038.698675
[2025-10-11 21:59:11] 2025-10-12 01:58:21,749 | INFO     | current memory leak: -3.69 B/s (using 348 data points, chi2=0.33)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,749 | INFO     | could have reported an average CPU frequency of 2440 MHz (16 samples)
[2025-10-11 21:59:11] 2025-10-12 01:58:21,750 | INFO     | ..............................
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . Timing measurements:
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . get job = 0 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . initial setup = 5 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . payload setup = 22 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . stage-in = 0 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,751 | INFO     | . payload execution = 23077 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,752 | INFO     | . stage-out = 3 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,752 | INFO     | . log creation = 0 s
[2025-10-11 21:59:11] 2025-10-12 01:58:21,752 | INFO     | ..............................
[2025-10-11 21:59:11] 2025-10-12 01:58:22,151 | INFO     | 
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | job summary report
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | --------------------------------------------------
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | PanDA job id: 6838365155
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | task id: 46676269
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | errors: (none)
[2025-10-11 21:59:11] 2025-10-12 01:58:22,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | pilot state: finished 
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | transexitcode: 0
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | exeerrorcode: 0
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | exeerrordiag: 
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | exitcode: 0
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | exitmsg: OK
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | cpuconsumptiontime: 64578 s
[2025-10-11 21:59:11] 2025-10-12 01:58:22,153 | INFO     | nevents: 400
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | neventsw: 0
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | pid: 2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | pgrp: 2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | corecount: 8
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | event service: False
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 19: 2349175, 23: 2349203, 23100: 2384354, 23104: 2393352, 23107: 2393408, 23122: 2393602}
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | --------------------------------------------------
[2025-10-11 21:59:11] 2025-10-12 01:58:22,154 | INFO     | 
[2025-10-11 21:59:11] 2025-10-12 01:58:22,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 21:59:11] 2025-10-12 01:58:22,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:59:11] 2025-10-12 01:58:22,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:59:11] 2025-10-12 01:58:22,334 | INFO     | job 6838365155 has completed (purged errors)
[2025-10-11 21:59:11] 2025-10-12 01:58:22,335 | INFO     | overall cleanup function is called
[2025-10-11 21:59:11] 2025-10-12 01:58:23,366 | INFO     | --- collectZombieJob: --- 10, [2811967]
[2025-10-11 21:59:11] 2025-10-12 01:58:23,366 | INFO     | zombie collector waiting for pid 2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:23,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:59:11] 2025-10-12 01:58:23,397 | INFO     | collected zombie processes
[2025-10-11 21:59:11] 2025-10-12 01:58:23,397 | INFO     | will attempt to kill all subprocesses of pid=2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:24,226 | INFO     | process IDs to be killed: [2811967] (in reverse order)
[2025-10-11 21:59:11] 2025-10-12 01:58:24,466 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:59:11] 2025-10-12 01:58:24,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:59:11] 2025-10-12 01:58:24,490 | INFO     | did not find any defunct processes belonging to 2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:24,525 | INFO     | did not find any defunct processes belonging to 2811967
[2025-10-11 21:59:11] 2025-10-12 01:58:24,525 | INFO     | ready for new job
[2025-10-11 21:59:11] 2025-10-12 01:58:24,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:59:11] 2025-10-12 01:58:24,536 | INFO     | ***************************************
[2025-10-11 21:59:11] 2025-10-12 01:58:24,537 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:59:11] 2025-10-12 01:58:24,538 | INFO     | ***************************************
[2025-10-11 21:59:11] 2025-10-12 01:58:24,538 | INFO     | 
[2025-10-11 21:59:11] 2025-10-12 01:58:24,544 | INFO     | architecture information:
[2025-10-11 21:59:11] 2025-10-12 01:58:24,546 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:59:11] 2025-10-12 01:58:24,601 | INFO     | cat /etc/os-release:
[2025-10-11 21:59:11] NAME="CentOS Linux"
[2025-10-11 21:59:11] VERSION="7 (Core)"
[2025-10-11 21:59:11] ID="centos"
[2025-10-11 21:59:11] ID_LIKE="rhel fedora"
[2025-10-11 21:59:11] VERSION_ID="7"
[2025-10-11 21:59:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:59:11] ANSI_COLOR="0;31"
[2025-10-11 21:59:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:59:11] HOME_URL="https://www.centos.org/"
[2025-10-11 21:59:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:59:11] 
[2025-10-11 21:59:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:59:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:59:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:59:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:59:11] 
[2025-10-11 21:59:11] 2025-10-12 01:58:24,607 | INFO     | ***************************************
[2025-10-11 21:59:11] 2025-10-12 01:58:25,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 21:59:11] 2025-10-12 01:58:25,290 | INFO     | sufficient remaining disk space (63833112576 B)
[2025-10-11 21:59:11] 2025-10-12 01:58:25,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:59:11] 2025-10-12 01:58:25,291 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:59:11] 2025-10-12 01:58:25,291 | INFO     | update_server=False
[2025-10-11 21:59:11] 2025-10-12 01:58:25,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:59:11] 2025-10-12 01:58:25,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:59:11] 2025-10-12 01:58:25,292 | INFO     | aborting loop
[2025-10-11 21:59:11] 2025-10-12 01:58:25,366 | INFO     | all data control threads have been joined
[2025-10-11 21:59:11] 2025-10-12 01:58:25,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:59:11] 2025-10-12 01:58:25,611 | INFO     | all payload control threads have been joined
[2025-10-11 21:59:11] 2025-10-12 01:58:26,298 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,316 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,372 | INFO     | [data] control thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,564 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:59:11] 2025-10-12 01:58:26,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,617 | INFO     | [payload] control thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,646 | INFO     | [job] validate thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:26,716 | INFO     | all job control threads have been joined
[2025-10-11 21:59:11] 2025-10-12 01:58:27,015 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:27,017 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:27,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:59:11] 2025-10-12 01:58:27,391 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:27,589 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:27,721 | INFO     | [job] control thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:27,746 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:28,178 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:30,606 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:59:11] 2025-10-12 01:58:54,886 | INFO     | PID=2804334 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:59:11] 2025-10-12 01:58:54,887 | INFO     | .. there are 8 such processes running
[2025-10-11 21:59:11] 2025-10-12 01:58:54,888 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:59:11] 2025-10-12 01:58:54,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:59:11] 2025-10-12 01:58:54,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:59:11] 2025-10-12 01:59:04,484 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:59:11] 2025-10-12 01:59:04,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037824419648)>', '<ExcThread(monitor, started 140037308004096)>']
[2025-10-11 21:59:11] 2025-10-12 01:59:05,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:59:11] 2025-10-12 01:59:05,952 | INFO     | [monitor] control thread has ended
[2025-10-11 21:59:11] 2025-10-12 01:59:10,005 | INFO     | all workflow threads have been joined
[2025-10-11 21:59:11] 2025-10-12 01:59:10,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:59:11] 2025-10-12 01:59:10,006 | INFO     | traces error code: 0
[2025-10-11 21:59:11] 2025-10-12 01:59:10,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:59:11] 2025-10-12 01:59:10,362 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:59:11] 2025-10-12 01:59:10,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:59:11] 2025-10-12 01:59:10,371 [wrapper] pilotpid: 2804334
[2025-10-11 21:59:11] 2025-10-12 01:59:10,375 [wrapper] Pilot exit status: 0
[2025-10-11 21:59:11] 2025-10-12 01:59:10,428 [wrapper] pandaids: 6838365155
[2025-10-11 21:59:11] 2025-10-12 01:59:10,611 [wrapper] cleanup supervisor_pilot 3398193 2804335
[2025-10-11 21:59:11] 2025-10-12 01:59:10,616 [wrapper] Test setup, not cleaning
[2025-10-11 21:59:11] 2025-10-12 01:59:10,620 [wrapper] apfmon messages muted
[2025-10-11 21:59:11] 2025-10-12 01:59:10,624 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:59:11] 2025-10-12 01:59:10,629 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:59:11]  *** Error codes and diagnostics ***
[2025-10-11 21:59:11]     "exeErrorCode": 0,
[2025-10-11 21:59:11]     "exeErrorDiag": "",
[2025-10-11 21:59:11]     "pilotErrorCode": 0,
[2025-10-11 21:59:11]     "pilotErrorDiag": "",
[2025-10-11 21:59:11]  *** Listing of results directory ***
[2025-10-11 21:59:11] total 415876
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 07:18 queuedata.json
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 07:21 pilot3.tar.gz
[2025-10-11 21:59:11] -rwx------. 1 boincer umatlas     36292 Oct 11 07:23 runpilot2-wrapper.sh
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas       100 Oct 11 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:59:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 15:31 run_atlas
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas       105 Oct 11 15:31 job.xml
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas 222732628 Oct 11 15:31 EVNT.46676267._002272.pool.root.1
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 15:31 input.tar.gz
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:31 start_atlas.sh
[2025-10-11 21:59:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 15:31 shared
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas         0 Oct 11 15:31 boinc_lockfile
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 15:31 pandaJob.out
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas    975512 Oct 11 15:32 agis_schedconf.cvmfs.json
[2025-10-11 21:59:11] drwx------. 5 boincer umatlas      4096 Oct 11 15:32 pilot3
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas      6614 Oct 11 21:55 init_data.xml
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas 192011434 Oct 11 21:56 HITS.46676269._056687.pool.root.1
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas       531 Oct 11 21:56 boinc_task_state.xml
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas      1057 Oct 11 21:57 memory_monitor_summary.json
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas    570528 Oct 11 21:58 log.46676269._056687.job.log.tgz.1
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas      7852 Oct 11 21:58 heartbeat.json
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas        95 Oct 11 21:58 pilot_heartbeat.json
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:59 boinc_mmap_file
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:59 wrapper_checkpoint.txt
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas      4823 Oct 11 21:59 pilotlog.txt
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas   3034755 Oct 11 21:59 log.46676269._056687.job.log.1
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas       357 Oct 11 21:59 output.list
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:59 runtime_log
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas   3624960 Oct 11 21:59 result.tar.gz
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 21:59 runtime_log.err
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas       660 Oct 11 21:59 7UFMDmvrmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7HgNDmkVgyOo.diag
[2025-10-11 21:59:11] -rw-r--r--. 1 boincer umatlas     20985 Oct 11 21:59 stderr.txt
[2025-10-11 21:59:11] HITS file was successfully produced:
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas 192011434 Oct 11 21:56 shared/HITS.pool.root.1
[2025-10-11 21:59:11]  *** Contents of shared directory: ***
[2025-10-11 21:59:11] total 409148
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas 222732628 Oct 11 15:31 ATLAS.root_0
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 15:31 input.tar.gz
[2025-10-11 21:59:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 15:31 start_atlas.sh
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas 192011434 Oct 11 21:56 HITS.pool.root.1
[2025-10-11 21:59:11] -rw-------. 1 boincer umatlas   3624960 Oct 11 21:59 result.tar.gz
21:59:12 (2800619): run_atlas exited; CPU time 65331.676756
21:59:12 (2800619): called boinc_finish(0)

</stderr_txt>
]]>

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