Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:16:53 (2776895): wrapper (7.7.26015): starting
04:16:53 (2776895): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 04:16:53] Arguments: --nthreads 3
[2025-10-12 04:16:53] Threads: 3
[2025-10-12 04:16:53] Checking for CVMFS
[2025-10-12 04:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:16:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:16:54] 2.9.2.0 1718076 3751 70736 151604 1 56 29056985 36864000 0 130560 0 2765050 99.991 122706 1035 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 04:16:54] CVMFS is ok
[2025-10-12 04:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:16:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:16:54] Further information can be found at the LHC@home message board.
[2025-10-12 04:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:16:54] Checking for apptainer binary...
[2025-10-12 04:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:16:54] Running /usr/bin/apptainer --version
[2025-10-12 04:16:54] apptainer version 1.4.1-1.1
[2025-10-12 04:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:16:54] thA333
[2025-10-12 04:16:54] apptainer works
[2025-10-12 04:16:54] Set ATHENA_PROC_NUMBER=3
[2025-10-12 04:16:54] Set ATHENA_CORE_NUMBER=3
[2025-10-12 04:16:54] Starting ATLAS job with PandaID=6838365078
[2025-10-12 04:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:54:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:54:25] 2025-10-12 03:53:54,856 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | INFO     | sufficient remaining disk space (230678331392 B)
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | INFO     | update_server=False
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:54:25] 2025-10-12 03:53:54,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:54:25] 2025-10-12 03:53:55,324 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 05:54:25] 2025-10-12 03:53:55,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 05:54:25] 2025-10-12 03:53:55,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:54:25] 2025-10-12 03:53:55,325 | INFO     | will abort loop
[2025-10-12 05:54:25] 2025-10-12 03:53:55,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:54:25] 2025-10-12 03:53:55,874 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:55,875 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:55,902 | INFO     | all data control threads have been joined
[2025-10-12 05:54:25] 2025-10-12 03:53:55,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,123 | INFO     | all job control threads have been joined
[2025-10-12 05:54:25] 2025-10-12 03:53:56,309 | INFO     | all payload control threads have been joined
[2025-10-12 05:54:25] 2025-10-12 03:53:56,330 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,400 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,452 | INFO     | [job] validate thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,561 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,634 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,903 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:56,907 | INFO     | [data] control thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:57,129 | INFO     | [job] control thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:57,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:54:25] 2025-10-12 03:53:57,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:57,225 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:57,314 | INFO     | [payload] control thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:53:57,638 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:54:01,141 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:54:25] 2025-10-12 03:54:13,933 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:54:25] 2025-10-12 03:54:15,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052655724352)>', '<ExcThread(monitor, started 140052004845312)>']
[2025-10-12 05:54:25] 2025-10-12 03:54:20,339 | INFO     | all workflow threads have been joined
[2025-10-12 05:54:25] 2025-10-12 03:54:20,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:54:25] 2025-10-12 03:54:20,341 | INFO     | traces error code: 0
[2025-10-12 05:54:25] 2025-10-12 03:54:20,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | INFO     | PID=2780617 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 05:54:25] 2025-10-12 03:54:25,065 | INFO     | [monitor] control thread has ended
[2025-10-12 05:54:25] 2025-10-12 03:54:25,108 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:54:25] 2025-10-12 03:54:25,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:54:25] 2025-10-12 03:54:25,113 [wrapper] pilotpid: 2780617
[2025-10-12 05:54:25] 2025-10-12 03:54:25,115 [wrapper] Pilot exit status: 0
[2025-10-12 05:54:25] 2025-10-12 03:54:25,122 [wrapper] pandaids: 6838365078
[2025-10-12 05:54:25] 2025-10-12 03:54:25,139 [wrapper] cleanup supervisor_pilot 2799557 2780618
[2025-10-12 05:54:25] 2025-10-12 03:54:25,142 [wrapper] Test setup, not cleaning
[2025-10-12 05:54:25] 2025-10-12 03:54:25,145 [wrapper] apfmon messages muted
[2025-10-12 05:54:25] 2025-10-12 03:54:25,147 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:54:25] 2025-10-12 03:54:25,151 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:54:25]  *** Error codes and diagnostics ***
[2025-10-12 05:54:25]     "exeErrorCode": 0,
[2025-10-12 05:54:25]     "exeErrorDiag": "",
[2025-10-12 05:54:25]     "pilotErrorCode": 0,
[2025-10-12 05:54:25]     "pilotErrorDiag": "",
[2025-10-12 05:54:25]  *** Listing of results directory ***
[2025-10-12 05:54:25] total 415336
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      5112 Oct 11 13:18 queuedata.json
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc    557409 Oct 11 13:21 pilot3.tar.gz
[2025-10-12 05:54:25] -rwx------ 1 boinc boinc     36292 Oct 11 13:22 runpilot2-wrapper.sh
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:54:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 04:16 run_atlas
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 04:16 job.xml
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc 218931826 Oct 12 04:16 EVNT.46676267._002269.pool.root.1
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc    569678 Oct 12 04:16 input.tar.gz
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:16 start_atlas.sh
[2025-10-12 05:54:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 04:16 shared
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:16 boinc_setup_complete
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      6197 Oct 12 04:16 init_data.xml
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:16 boinc_lockfile
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      2549 Oct 12 04:16 pandaJob.out
[2025-10-12 05:54:25] -rw------- 1 boinc boinc    975496 Oct 12 04:17 agis_schedconf.cvmfs.json
[2025-10-12 05:54:25] -rw------- 1 boinc boinc   1560580 Oct 12 04:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:54:25] drwx------ 5 boinc boinc      4096 Oct 12 04:17 pilot3
[2025-10-12 05:54:25] -rw------- 1 boinc boinc 200285252 Oct 12 05:53 HITS.46676269._056610.pool.root.1
[2025-10-12 05:54:25] -rw------- 1 boinc boinc        95 Oct 12 05:53 pilot_heartbeat.json
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc       529 Oct 12 05:53 boinc_task_state.xml
[2025-10-12 05:54:25] -rw------- 1 boinc boinc      1018 Oct 12 05:53 memory_monitor_summary.json
[2025-10-12 05:54:25] -rw------- 1 boinc boinc    254284 Oct 12 05:53 log.46676269._056610.job.log.tgz.1
[2025-10-12 05:54:25] -rw------- 1 boinc boinc      7761 Oct 12 05:53 heartbeat.json
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 05:54 wrapper_checkpoint.txt
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:54 boinc_mmap_file
[2025-10-12 05:54:25] -rw------- 1 boinc boinc       817 Oct 12 05:54 pilotlog.txt
[2025-10-12 05:54:25] -rw------- 1 boinc boinc    846628 Oct 12 05:54 log.46676269._056610.job.log.1
[2025-10-12 05:54:25] -rw------- 1 boinc boinc       357 Oct 12 05:54 output.list
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:54 runtime_log
[2025-10-12 05:54:25] -rw------- 1 boinc boinc   1116160 Oct 12 05:54 result.tar.gz
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      8777 Oct 12 05:54 runtime_log.err
[2025-10-12 05:54:25] -rw------- 1 boinc boinc       658 Oct 12 05:54 CPvKDmwqmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhHgNDmjBhyGo.diag
[2025-10-12 05:54:25] -rw-r--r-- 1 boinc boinc      8185 Oct 12 05:54 stderr.txt
[2025-10-12 05:54:25] HITS file was successfully produced:
[2025-10-12 05:54:25] -rw------- 1 boinc boinc 200285252 Oct 12 05:53 shared/HITS.pool.root.1
[2025-10-12 05:54:25]  *** Contents of shared directory: ***
[2025-10-12 05:54:25] total 411072
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc 218931826 Oct 12 04:16 ATLAS.root_0
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc    569678 Oct 12 04:16 input.tar.gz
[2025-10-12 05:54:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:16 start_atlas.sh
[2025-10-12 05:54:25] -rw------- 1 boinc boinc 200285252 Oct 12 05:53 HITS.pool.root.1
[2025-10-12 05:54:25] -rw------- 1 boinc boinc   1116160 Oct 12 05:54 result.tar.gz
05:54:26 (2776895): run_atlas exited; CPU time 16544.673967
05:54:26 (2776895): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN