Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:51 (30945): wrapper (7.7.26015): starting
12:27:51 (30945): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 12:27:51] Arguments: --nthreads 12
[2025-10-11 12:27:51] Threads: 12
[2025-10-11 12:27:51] Checking for CVMFS
[2025-10-11 12:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:27:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:27:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:27:51] 2.11.2.0 2987 221635 98068 151590 0 58 13274357 20275201 1 130560 1 107222043 99.984 13353302 12204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 12:27:51] CVMFS is ok
[2025-10-11 12:27:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:27:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:27:51] Further information can be found at the LHC@home message board.
[2025-10-11 12:27:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:27:51] Checking for apptainer binary...
[2025-10-11 12:27:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:27:51] Running /usr/bin/apptainer --version
[2025-10-11 12:27:51] apptainer version 1.3.2-1.el7
[2025-10-11 12:27:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:27:53] c-205-19.aglt2.org
[2025-10-11 12:27:53] apptainer works
[2025-10-11 12:27:53] Set ATHENA_PROC_NUMBER=12
[2025-10-11 12:27:53] Set ATHENA_CORE_NUMBER=12
[2025-10-11 12:27:53] Starting ATLAS job with PandaID=6838365009
[2025-10-11 12:27:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:39:32]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:39:32]  protocol_id=None
[2025-10-11 13:39:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 13:39:32]  replicas=None
[2025-10-11 13:39:32]  scope=mc23_13p6TeV
[2025-10-11 13:39:32]  status=None
[2025-10-11 13:39:32]  status_code=0
[2025-10-11 13:39:32]  storage_token=
[2025-10-11 13:39:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838365009/log.46676269._056541.job.log.tgz.1
[2025-10-11 13:39:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/ec/log.46676269._056541.job.log.tgz.1
[2025-10-11 13:39:32]  workdir=None
[2025-10-11 13:39:32] ]
[2025-10-11 13:39:32] 2025-10-11 17:38:54,328 | INFO     | transferring file log.46676269._056541.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838365009/log.46676269._056541.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 13:39:32] 2025-10-11 17:38:54,328 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838365009/log.46676269._056541.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._056541.job
[2025-10-11 13:39:32] 2025-10-11 17:38:54,350 | INFO     | adding to output.list: log.46676269._056541.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/ec/log.46676269._056541.job.log.tg
[2025-10-11 13:39:32] 2025-10-11 17:38:54,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 13:39:32] 2025-10-11 17:38:54,351 | INFO     | summary of transferred files:
[2025-10-11 13:39:32] 2025-10-11 17:38:54,351 | INFO     |  -- lfn=log.46676269._056541.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 13:39:32] 2025-10-11 17:38:54,352 | INFO     | stage-out finished correctly
[2025-10-11 13:39:32] 2025-10-11 17:38:54,436 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 13:39:32] 2025-10-11 17:38:54,518 | INFO     | job 6838365009 has state=finished
[2025-10-11 13:39:32] 2025-10-11 17:38:54,519 | INFO     | preparing for final server update for job 6838365009 in state='finished'
[2025-10-11 13:39:32] 2025-10-11 17:38:54,519 | INFO     | this job has now completed (state=finished)
[2025-10-11 13:39:32] 2025-10-11 17:38:54,520 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 13:39:32] 2025-10-11 17:38:54,520 | INFO     | log transfer has been attempted: DONE
[2025-10-11 13:39:32] 2025-10-11 17:38:54,520 | INFO     | job 6838365009 has finished - writing final server update
[2025-10-11 13:39:32] 2025-10-11 17:38:54,520 | INFO     | total number of processed events: 400 (read)
[2025-10-11 13:39:32] 2025-10-11 17:38:54,521 | INFO     | executing command: lscpu
[2025-10-11 13:39:32] 2025-10-11 17:38:54,547 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 13:39:32] 2025-10-11 17:38:54,987 | INFO     | time since job start (4246s) is within the limit (172800.0s)
[2025-10-11 13:39:32] 2025-10-11 17:38:56,559 | WARNING  | process 8740 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 13:39:32] 2025-10-11 17:38:56,559 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838365009/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:39:32] 2025-10-11 17:38:56,647 | INFO     | number of running child processes to parent process 8740: 1
[2025-10-11 13:39:32] 2025-10-11 17:38:56,648 | INFO     | maximum number of monitored processes: 6
[2025-10-11 13:39:32] 2025-10-11 17:38:56,993 | INFO     | time since job start (4248s) is within the limit (172800.0s)
[2025-10-11 13:39:32] 2025-10-11 17:38:58,998 | INFO     | time since job start (4250s) is within the limit (172800.0s)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,151 | INFO     | monitor loop #316: job 0:6838365009 is in state 'finished'
[2025-10-11 13:39:32] 2025-10-11 17:38:59,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,196 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 13:39:32] 2025-10-11 17:38:59,198 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.0833333333333
[2025-10-11 13:39:32] 2025-10-11 17:38:59,200 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838365009/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,201 | INFO     | extracted standard info from prmon json
[2025-10-11 13:39:32] 2025-10-11 17:38:59,201 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:39:32] 2025-10-11 17:38:59,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:39:32] 2025-10-11 17:38:59,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:39:32] 2025-10-11 17:38:59,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | sum of square deviations: 77515872.0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | sum of deviations: -7376308612.0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | mean x: 1760202313.0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | mean y: 2849218.4603174604
[2025-10-11 13:39:32] 2025-10-11 17:38:59,203 | INFO     | -- intersect: 167501390423.59854
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | intersect: 167501390423.59854
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | chi2: 0.05680269980148412
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | -- intersect: 167501390423.59854
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | current memory leak: -95.16 B/s (using 63 data points, chi2=0.06)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,204 | INFO     | ..............................
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . Timing measurements:
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . get job = 0 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . initial setup = 2 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . payload setup = 7 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . stage-in = 0 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . payload execution = 4218 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . stage-out = 0 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | . log creation = 0 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,205 | INFO     | ..............................
[2025-10-11 13:39:32] 2025-10-11 17:38:59,287 | INFO     | 
[2025-10-11 13:39:32] 2025-10-11 17:38:59,287 | INFO     | job summary report
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | --------------------------------------------------
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | PanDA job id: 6838365009
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | task id: 46676269
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | errors: (none)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:39:32] 2025-10-11 17:38:59,288 | INFO     | pilot state: finished 
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | transexitcode: 0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | exeerrorcode: 0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | exeerrordiag: 
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | exitcode: 0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | exitmsg: OK
[2025-10-11 13:39:32] 2025-10-11 17:38:59,289 | INFO     | cpuconsumptiontime: 46323 s
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | nevents: 400
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | neventsw: 0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | pid: 8740
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | pgrp: 8740
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | corecount: 12
[2025-10-11 13:39:32] 2025-10-11 17:38:59,290 | INFO     | event service: False
[2025-10-11 13:39:32] 2025-10-11 17:38:59,291 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 4229: 2375072, 4230: 2375071, 4231: 2384309, 4235: 2384447}
[2025-10-11 13:39:32] 2025-10-11 17:38:59,291 | INFO     | --------------------------------------------------
[2025-10-11 13:39:32] 2025-10-11 17:38:59,291 | INFO     | 
[2025-10-11 13:39:32] 2025-10-11 17:38:59,291 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 13:39:32] 2025-10-11 17:38:59,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,320 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:39:32] 2025-10-11 17:38:59,320 | INFO     | job 6838365009 has completed (purged errors)
[2025-10-11 13:39:32] 2025-10-11 17:38:59,320 | INFO     | overall cleanup function is called
[2025-10-11 13:39:32] 2025-10-11 17:39:00,326 | INFO     | --- collectZombieJob: --- 10, [8740]
[2025-10-11 13:39:32] 2025-10-11 17:39:00,326 | INFO     | zombie collector waiting for pid 8740
[2025-10-11 13:39:32] 2025-10-11 17:39:00,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:39:32] 2025-10-11 17:39:00,326 | INFO     | collected zombie processes
[2025-10-11 13:39:32] 2025-10-11 17:39:00,326 | INFO     | will attempt to kill all subprocesses of pid=8740
[2025-10-11 13:39:32] 2025-10-11 17:39:00,419 | INFO     | process IDs to be killed: [8740] (in reverse order)
[2025-10-11 13:39:32] 2025-10-11 17:39:00,469 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:39:32] 2025-10-11 17:39:00,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:39:32] 2025-10-11 17:39:00,474 | INFO     | did not find any defunct processes belonging to 8740
[2025-10-11 13:39:32] 2025-10-11 17:39:00,477 | INFO     | did not find any defunct processes belonging to 8740
[2025-10-11 13:39:32] 2025-10-11 17:39:00,478 | INFO     | ready for new job
[2025-10-11 13:39:32] 2025-10-11 17:39:00,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:39:32] 2025-10-11 17:39:00,479 | INFO     | ***************************************
[2025-10-11 13:39:32] 2025-10-11 17:39:00,479 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:39:32] 2025-10-11 17:39:00,479 | INFO     | ***************************************
[2025-10-11 13:39:32] 2025-10-11 17:39:00,479 | INFO     | 
[2025-10-11 13:39:32] 2025-10-11 17:39:00,480 | INFO     | architecture information:
[2025-10-11 13:39:32] 2025-10-11 17:39:00,480 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:39:32] 2025-10-11 17:39:00,494 | INFO     | cat /etc/os-release:
[2025-10-11 13:39:32] NAME="CentOS Linux"
[2025-10-11 13:39:32] VERSION="7 (Core)"
[2025-10-11 13:39:32] ID="centos"
[2025-10-11 13:39:32] ID_LIKE="rhel fedora"
[2025-10-11 13:39:32] VERSION_ID="7"
[2025-10-11 13:39:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:39:32] ANSI_COLOR="0;31"
[2025-10-11 13:39:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:39:32] HOME_URL="https://www.centos.org/"
[2025-10-11 13:39:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:39:32] 
[2025-10-11 13:39:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:39:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:39:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:39:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:39:32] 
[2025-10-11 13:39:32] 2025-10-11 17:39:00,495 | INFO     | ***************************************
[2025-10-11 13:39:32] 2025-10-11 17:39:00,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 13:39:32] 2025-10-11 17:39:01,014 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-10-11 13:39:32] 2025-10-11 17:39:01,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:39:32] 2025-10-11 17:39:01,015 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:39:32] 2025-10-11 17:39:01,015 | INFO     | update_server=False
[2025-10-11 13:39:32] 2025-10-11 17:39:01,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:39:32] 2025-10-11 17:39:01,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:39:32] 2025-10-11 17:39:01,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:39:32] 2025-10-11 17:39:01,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:39:32] 2025-10-11 17:39:01,016 | INFO     | aborting loop
[2025-10-11 13:39:32] 2025-10-11 17:39:01,274 | INFO     | all payload control threads have been joined
[2025-10-11 13:39:32] 2025-10-11 17:39:02,020 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,021 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,022 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,088 | INFO     | all data control threads have been joined
[2025-10-11 13:39:32] 2025-10-11 17:39:02,280 | INFO     | [payload] control thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,282 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:39:32] 2025-10-11 17:39:02,581 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:02,606 | INFO     | all job control threads have been joined
[2025-10-11 13:39:32] 2025-10-11 17:39:02,630 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,089 | INFO     | [data] control thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,116 | INFO     | [job] validate thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,251 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,389 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,436 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:03,611 | INFO     | [job] control thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:04,450 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:05,021 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:39:32] 2025-10-11 17:39:14,426 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:39:32] 2025-10-11 17:39:16,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872424929088)>', '<ExcThread(monitor, started 139871683327744)>']
[2025-10-11 13:39:32] 2025-10-11 17:39:21,170 | INFO     | all workflow threads have been joined
[2025-10-11 13:39:32] 2025-10-11 17:39:21,171 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:39:32] 2025-10-11 17:39:21,171 | INFO     | traces error code: 0
[2025-10-11 13:39:32] 2025-10-11 17:39:21,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:39:32] 2025-10-11 17:39:32,201 | INFO     | PID=2337 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 13:39:32] 2025-10-11 17:39:32,202 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:39:32] 2025-10-11 17:39:32,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:39:32] 2025-10-11 17:39:32,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:39:32] 2025-10-11 17:39:32,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:39:32] 2025-10-11 17:39:32,202 | INFO     | [monitor] control thread has ended
[2025-10-11 13:39:32] 2025-10-11 17:39:32,289 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:39:32] 2025-10-11 17:39:32,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:39:32] 2025-10-11 17:39:32,297 [wrapper] pilotpid: 2337
[2025-10-11 13:39:32] 2025-10-11 17:39:32,301 [wrapper] Pilot exit status: 0
[2025-10-11 13:39:32] 2025-10-11 17:39:32,318 [wrapper] pandaids: 6838365009
[2025-10-11 13:39:32] 2025-10-11 17:39:32,360 [wrapper] cleanup supervisor_pilot 14079 2338
[2025-10-11 13:39:32] 2025-10-11 17:39:32,364 [wrapper] Test setup, not cleaning
[2025-10-11 13:39:32] 2025-10-11 17:39:32,368 [wrapper] apfmon messages muted
[2025-10-11 13:39:32] 2025-10-11 17:39:32,372 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:39:32] 2025-10-11 17:39:32,376 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:39:32]  *** Error codes and diagnostics ***
[2025-10-11 13:39:32]     "exeErrorCode": 0,
[2025-10-11 13:39:32]     "exeErrorDiag": "",
[2025-10-11 13:39:32]     "pilotErrorCode": 0,
[2025-10-11 13:39:32]     "pilotErrorDiag": "",
[2025-10-11 13:39:32]  *** Listing of results directory ***
[2025-10-11 13:39:32] total 415276
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 07:04 pilot3.tar.gz
[2025-10-11 13:39:32] -rwx------ 1 boincer umatlas     36292 Oct 11 07:17 runpilot2-wrapper.sh
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 07:17 queuedata.json
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas       100 Oct 11 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:39:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 12:27 run_atlas
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas       105 Oct 11 12:27 job.xml
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas 224518927 Oct 11 12:27 EVNT.46676267._002266.pool.root.1
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 12:27 start_atlas.sh
[2025-10-11 13:39:32] drwxrwx--x 2 boincer umatlas      4096 Oct 11 12:27 shared
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 12:27 input.tar.gz
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas         0 Oct 11 12:27 boinc_lockfile
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 12:27 pandaJob.out
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas    975512 Oct 11 12:28 agis_schedconf.cvmfs.json
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas   1560580 Oct 11 12:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:39:32] drwx------ 5 boincer umatlas      4096 Oct 11 12:28 pilot3
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 13:38 init_data.xml
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas 194834937 Oct 11 13:38 HITS.46676269._056541.pool.root.1
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas       529 Oct 11 13:38 boinc_task_state.xml
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas      1050 Oct 11 13:38 memory_monitor_summary.json
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas    375913 Oct 11 13:38 log.46676269._056541.job.log.tgz.1
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas      7859 Oct 11 13:38 heartbeat.json
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 13:39 boinc_mmap_file
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas        27 Oct 11 13:39 wrapper_checkpoint.txt
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas       744 Oct 11 13:39 pilotlog.txt
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas        95 Oct 11 13:39 pilot_heartbeat.json
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas    618365 Oct 11 13:39 log.46676269._056541.job.log.1
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas       357 Oct 11 13:39 output.list
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas       620 Oct 11 13:39 runtime_log
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas   1013760 Oct 11 13:39 result.tar.gz
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas       659 Oct 11 13:39 X0CODm0mmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeGgNDmTsNZVm.diag
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 13:39 runtime_log.err
[2025-10-11 13:39:32] -rw-r--r-- 1 boincer umatlas     21796 Oct 11 13:39 stderr.txt
[2025-10-11 13:39:32] HITS file was successfully produced:
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas 194834937 Oct 11 13:38 shared/HITS.pool.root.1
[2025-10-11 13:39:32]  *** Contents of shared directory: ***
[2025-10-11 13:39:32] total 411104
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas 224518927 Oct 11 12:27 ATLAS.root_0
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 12:27 start_atlas.sh
[2025-10-11 13:39:32] -rw-r--r-- 2 boincer umatlas    569674 Oct 11 12:27 input.tar.gz
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas 194834937 Oct 11 13:38 HITS.pool.root.1
[2025-10-11 13:39:32] -rw------- 1 boincer umatlas   1013760 Oct 11 13:39 result.tar.gz
13:39:33 (30945): run_atlas exited; CPU time 46293.326231
13:39:33 (30945): called boinc_finish(0)

</stderr_txt>
]]>

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