Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:51 (1673306): wrapper (7.7.26015): starting
10:02:51 (1673306): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 10:02:51] Arguments: --nthreads 12
[2025-10-11 10:02:51] Threads: 12
[2025-10-11 10:02:51] Checking for CVMFS
[2025-10-11 10:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:02:53] 2.11.5.0 3542 30289 225904 151590 1 524 43333512 45568001 21687 130560 0 287146930 99.865 120813725 22375 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 10:02:53] CVMFS is ok
[2025-10-11 10:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:02:53] Further information can be found at the LHC@home message board.
[2025-10-11 10:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:02:53] Checking for apptainer binary...
[2025-10-11 10:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:02:53] Running /usr/bin/apptainer --version
[2025-10-11 10:02:53] apptainer version 1.4.1-1.el9
[2025-10-11 10:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:02:54] wns0088.triumf.lcg
[2025-10-11 10:02:54] apptainer works
[2025-10-11 10:02:54] Set ATHENA_PROC_NUMBER=12
[2025-10-11 10:02:54] Set ATHENA_CORE_NUMBER=12
[2025-10-11 10:02:54] Starting ATLAS job with PandaID=6838366360
[2025-10-11 10:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:08:39]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | wrong length of table data, x=[1760202301.0], y=[1365.0] (must be same and length>=4)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . Timing measurements:
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . get job = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . initial setup = 3 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload setup = 25 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-in = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload execution = 48 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-out = 2 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . log creation = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366360/pilotlog.txt
[2025-10-11 10:08:39] 2025-10-11 17:07:49,657 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 10:08:39] - Log from pilotlog.txt -
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838366360/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | extracted standard info from prmon json
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | wrong length of table data, x=[1760202301.0], y=[1365.0] (must be same and length>=4)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . Timing measurements:
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . get job = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . initial setup = 3 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload setup = 25 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-in = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload execution = 48 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-out = 2 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . log creation = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366360/pilotlog.txt
[2025-10-11 10:08:39] 2025-10-11 17:07:49,662 | WARNING  | 
[2025-10-11 10:08:39] [begin log extracts]
[2025-10-11 10:08:39] - Log from pilotlog.txt -
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838366360/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | extracted standard info from prmon json
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:08:39] 2025-10-11 17:07:49,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:08:39] 2025-10-11 17:07:49,562 | WARNING  | wrong length of table data, x=[1760202301.0], y=[1365.0] (must be same and length>=4)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | could have reported an average CPU frequency of 2639 MHz (4 samples)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . Timing measurements:
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . get job = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . initial setup = 3 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload setup = 25 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-in = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . payload execution = 48 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . stage-out = 2 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | . log creation = 0 s
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | ..............................
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 10:08:39] 2025-10-11 17:07:49,563 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366360/pilotlog.txt
[2025-10-11 10:08:39] [end log extracts]
[2025-10-11 10:08:39] 2025-10-11 17:07:49,662 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 10:08:39] 2025-10-11 17:07:49,663 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | 
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | job summary report
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | --------------------------------------------------
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | PanDA job id: 6838366360
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | task id: 46676269
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 10:05:21,645 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | pilot state: failed 
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | transexitcode: 65
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | exeerrorcode: 65
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | exitcode: 65
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | nevents: 0
[2025-10-11 10:08:39] 2025-10-11 17:07:50,090 | INFO     | neventsw: 0
[2025-10-11 10:08:39] 2025-10-11 17:07:50,091 | INFO     | pid: 1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:50,091 | INFO     | pgrp: 1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:50,091 | INFO     | corecount: 12
[2025-10-11 10:08:39] 2025-10-11 17:07:50,091 | INFO     | event service: False
[2025-10-11 10:08:39] 2025-10-11 17:07:50,091 | INFO     | sizes: {0: 2348854, 11: 2348854, 21: 2349144, 22: 2349172, 78: 2372518, 81: 2376810, 83: 2376966, 217: 2377160}
[2025-10-11 10:08:39] 2025-10-11 17:07:50,112 | INFO     | --------------------------------------------------
[2025-10-11 10:08:39] 2025-10-11 17:07:50,112 | INFO     | 
[2025-10-11 10:08:39] 2025-10-11 17:07:50,112 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 10:08:39] 2025-10-11 17:07:50,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:08:39] 2025-10-11 17:07:50,283 | INFO     | job 6838366360 has completed (purged errors)
[2025-10-11 10:08:39] 2025-10-11 17:07:50,284 | INFO     | overall cleanup function is called
[2025-10-11 10:08:39] 2025-10-11 17:07:51,291 | INFO     | --- collectZombieJob: --- 10, [1688554]
[2025-10-11 10:08:39] 2025-10-11 17:07:51,291 | INFO     | zombie collector waiting for pid 1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:51,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:08:39] 2025-10-11 17:07:51,291 | INFO     | collected zombie processes
[2025-10-11 10:08:39] 2025-10-11 17:07:51,291 | INFO     | will attempt to kill all subprocesses of pid=1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:52,727 | INFO     | process IDs to be killed: [1688554] (in reverse order)
[2025-10-11 10:08:39] 2025-10-11 17:07:53,420 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:08:39] 2025-10-11 17:07:53,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:08:39] 2025-10-11 17:07:53,463 | INFO     | did not find any defunct processes belonging to 1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:53,502 | INFO     | did not find any defunct processes belonging to 1688554
[2025-10-11 10:08:39] 2025-10-11 17:07:53,502 | INFO     | ready for new job
[2025-10-11 10:08:39] 2025-10-11 17:07:53,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:08:39] 2025-10-11 17:07:53,536 | INFO     | ***************************************
[2025-10-11 10:08:39] 2025-10-11 17:07:53,536 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:08:39] 2025-10-11 17:07:53,536 | INFO     | ***************************************
[2025-10-11 10:08:39] 2025-10-11 17:07:53,536 | INFO     | 
[2025-10-11 10:08:39] 2025-10-11 17:07:53,538 | INFO     | architecture information:
[2025-10-11 10:08:39] 2025-10-11 17:07:53,550 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:08:39] 2025-10-11 17:07:53,611 | INFO     | cat /etc/os-release:
[2025-10-11 10:08:39] NAME="CentOS Linux"
[2025-10-11 10:08:39] VERSION="7 (Core)"
[2025-10-11 10:08:39] ID="centos"
[2025-10-11 10:08:39] ID_LIKE="rhel fedora"
[2025-10-11 10:08:39] VERSION_ID="7"
[2025-10-11 10:08:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:08:39] ANSI_COLOR="0;31"
[2025-10-11 10:08:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:08:39] HOME_URL="https://www.centos.org/"
[2025-10-11 10:08:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:08:39] 
[2025-10-11 10:08:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:08:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:08:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:08:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:08:39] 
[2025-10-11 10:08:39] 2025-10-11 17:07:53,612 | INFO     | ***************************************
[2025-10-11 10:08:39] 2025-10-11 17:07:54,115 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 10:08:39] 2025-10-11 17:07:54,263 | INFO     | sufficient remaining disk space (1970041520128 B)
[2025-10-11 10:08:39] 2025-10-11 17:07:54,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:08:39] 2025-10-11 17:07:54,263 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:08:39] 2025-10-11 17:07:54,263 | INFO     | update_server=False
[2025-10-11 10:08:39] 2025-10-11 17:07:54,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:08:39] 2025-10-11 17:07:54,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:08:39] 2025-10-11 17:07:54,265 | INFO     | aborting loop
[2025-10-11 10:08:39] 2025-10-11 17:07:54,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:08:39] 2025-10-11 17:07:54,611 | INFO     | all job control threads have been joined
[2025-10-11 10:08:39] 2025-10-11 17:07:55,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:08:39] 2025-10-11 17:07:55,164 | INFO     | all data control threads have been joined
[2025-10-11 10:08:39] 2025-10-11 17:07:55,270 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,276 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:08:39] 2025-10-11 17:07:55,424 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,618 | INFO     | [job] control thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,686 | INFO     | all payload control threads have been joined
[2025-10-11 10:08:39] 2025-10-11 17:07:55,777 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,785 | INFO     | [job] validate thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:55,961 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,098 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,170 | INFO     | [data] control thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,465 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,556 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,678 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:56,692 | INFO     | [payload] control thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:57,413 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:07:58,276 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:08:39] 2025-10-11 17:08:22,477 | INFO     | PID=1681705 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:08:39] 2025-10-11 17:08:22,477 | INFO     | .. there are 42 such processes running
[2025-10-11 10:08:39] 2025-10-11 17:08:22,477 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:08:39] 2025-10-11 17:08:22,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:08:39] 2025-10-11 17:08:22,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:08:39] 2025-10-11 17:08:31,572 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:08:39] 2025-10-11 17:08:32,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464128374592)>', '<ExcThread(monitor, started 140463734511360)>']
[2025-10-11 10:08:39] 2025-10-11 17:08:32,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:08:39] 2025-10-11 17:08:32,539 | INFO     | [monitor] control thread has ended
[2025-10-11 10:08:39] 2025-10-11 17:08:37,310 | INFO     | all workflow threads have been joined
[2025-10-11 10:08:39] 2025-10-11 17:08:37,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:08:39] 2025-10-11 17:08:37,311 | INFO     | traces error code: 0
[2025-10-11 10:08:39] 2025-10-11 17:08:37,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:08:39] 2025-10-11 17:08:38,165 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:08:39] 2025-10-11 17:08:38,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:08:39] 2025-10-11 17:08:38,175 [wrapper] pilotpid: 1681705
[2025-10-11 10:08:39] 2025-10-11 17:08:38,180 [wrapper] Pilot exit status: 0
[2025-10-11 10:08:39] 2025-10-11 17:08:38,329 [wrapper] pandaids: 6838366360
[2025-10-11 10:08:39] 2025-10-11 17:08:38,390 [wrapper] cleanup supervisor_pilot 1681711 1681706
[2025-10-11 10:08:39] 2025-10-11 17:08:38,392 [wrapper] Test setup, not cleaning
[2025-10-11 10:08:39] 2025-10-11 17:08:38,394 [wrapper] apfmon messages muted
[2025-10-11 10:08:39] 2025-10-11 17:08:38,395 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:08:39] 2025-10-11 17:08:38,397 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:08:39]  *** Error codes and diagnostics ***
[2025-10-11 10:08:39]     "exeErrorCode": 65,
[2025-10-11 10:08:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 10:08:39]     "pilotErrorCode": 1305,
[2025-10-11 10:08:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 10:08:39]  *** Listing of results directory ***
[2025-10-11 10:08:39] total 219772
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc    557409 Oct 11 04:21 pilot3.tar.gz
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc      5112 Oct 11 04:52 queuedata.json
[2025-10-11 10:08:39] -rwx------. 1 boinc boinc     36292 Oct 11 04:54 runpilot2-wrapper.sh
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc       100 Oct 11 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:08:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 10:02 run_atlas
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc       105 Oct 11 10:02 job.xml
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc      6594 Oct 11 10:02 init_data.xml
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc 220915370 Oct 11 10:02 EVNT.46676267._002298.pool.root.1
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 10:08:39] drwxrwx--x. 2 boinc boinc      4096 Oct 11 10:02 shared
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc    569679 Oct 11 10:02 input.tar.gz
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc         0 Oct 11 10:02 boinc_lockfile
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc      2550 Oct 11 10:02 pandaJob.out
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc    975512 Oct 11 10:03 agis_schedconf.cvmfs.json
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc   1560580 Oct 11 10:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:08:39] drwx------. 5 boinc boinc      4096 Oct 11 10:03 pilot3
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc       976 Oct 11 10:05 memory_monitor_summary.json
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc     22146 Oct 11 10:05 log.46676269._057243.job.log.tgz.1
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc        95 Oct 11 10:07 pilot_heartbeat.json
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc      8416 Oct 11 10:07 heartbeat.json
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc       524 Oct 11 10:08 boinc_task_state.xml
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc      8192 Oct 11 10:08 boinc_mmap_file
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc      4823 Oct 11 10:08 pilotlog.txt
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc        22 Oct 11 10:08 wrapper_checkpoint.txt
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc     92631 Oct 11 10:08 log.46676269._057243.job.log.1
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc       188 Oct 11 10:08 output.list
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc       620 Oct 11 10:08 runtime_log
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc    133120 Oct 11 10:08 result.tar.gz
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc      8528 Oct 11 10:08 runtime_log.err
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc       644 Oct 11 10:08 DE8KDmsLnR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFNgNDmWDnuDn.diag
[2025-10-11 10:08:39] -rw-r--r--. 1 boinc boinc     21791 Oct 11 10:08 stderr.txt
[2025-10-11 10:08:39] No HITS result produced
[2025-10-11 10:08:39]  *** Contents of shared directory: ***
[2025-10-11 10:08:39] total 216448
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc 220915370 Oct 11 10:02 ATLAS.root_0
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 10:08:39] -rw-r--r--. 2 boinc boinc    569679 Oct 11 10:02 input.tar.gz
[2025-10-11 10:08:39] -rw-------. 1 boinc boinc    133120 Oct 11 10:08 result.tar.gz
10:08:40 (1673306): run_atlas exited; CPU time 29.109442
10:08:40 (1673306): called boinc_finish(0)

</stderr_txt>
]]>

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