Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:11:20 (2611595): wrapper (7.7.26015): starting
04:11:20 (2611595): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 04:11:20] Arguments: --nthreads 3
[2025-10-12 04:11:20] Threads: 3
[2025-10-12 04:11:20] Checking for CVMFS
[2025-10-12 04:11:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:11:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:11:20] 2.9.2.0 1544458 3761 70864 151603 3 56 30638308 36864000 0 130560 0 2791277 99.991 124068 1159 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 04:11:20] CVMFS is ok
[2025-10-12 04:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:11:20] Further information can be found at the LHC@home message board.
[2025-10-12 04:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:11:20] Checking for apptainer binary...
[2025-10-12 04:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:11:20] Running /usr/bin/apptainer --version
[2025-10-12 04:11:20] apptainer version 1.4.1-1.1
[2025-10-12 04:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:11:20] atlasA223a
[2025-10-12 04:11:20] apptainer works
[2025-10-12 04:11:20] Set ATHENA_PROC_NUMBER=3
[2025-10-12 04:11:20] Set ATHENA_CORE_NUMBER=3
[2025-10-12 04:11:20] Starting ATLAS job with PandaID=6838365113
[2025-10-12 04:11:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:41:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:41:58] 2025-10-12 03:41:27,706 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:41:58] 2025-10-12 03:41:27,716 | INFO     | cat /etc/os-release:
[2025-10-12 05:41:58] NAME="CentOS Linux"
[2025-10-12 05:41:58] VERSION="7 (Core)"
[2025-10-12 05:41:58] ID="centos"
[2025-10-12 05:41:58] ID_LIKE="rhel fedora"
[2025-10-12 05:41:58] VERSION_ID="7"
[2025-10-12 05:41:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:41:58] ANSI_COLOR="0;31"
[2025-10-12 05:41:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:41:58] HOME_URL="https://www.centos.org/"
[2025-10-12 05:41:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:41:58] 
[2025-10-12 05:41:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:41:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:41:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:41:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:41:58] 
[2025-10-12 05:41:58] 2025-10-12 03:41:27,716 | INFO     | ***************************************
[2025-10-12 05:41:58] 2025-10-12 03:41:28,219 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | INFO     | sufficient remaining disk space (329388130304 B)
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | INFO     | update_server=False
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | INFO     | aborting loop
[2025-10-12 05:41:58] 2025-10-12 03:41:28,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:41:58] 2025-10-12 03:41:28,347 | INFO     | all data control threads have been joined
[2025-10-12 05:41:58] 2025-10-12 03:41:29,225 | INFO     | all payload control threads have been joined
[2025-10-12 05:41:58] 2025-10-12 03:41:29,239 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:29,239 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:29,240 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:29,353 | INFO     | [data] control thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:29,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:29,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:41:58] 2025-10-12 03:41:29,862 | INFO     | all job control threads have been joined
[2025-10-12 05:41:58] 2025-10-12 03:41:30,036 | INFO     | [job] validate thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:41:58] 2025-10-12 03:41:30,077 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,142 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,231 | INFO     | [payload] control thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,379 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,469 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-12 05:41:58] 2025-10-12 03:41:30,590 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,639 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,643 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:30,868 | INFO     | [job] control thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:31,605 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:34,083 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:41:58] 2025-10-12 03:41:38,228 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:41:58] 2025-10-12 03:41:38,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009648871232)>', '<ExcThread(monitor, started 140009013241600)>']
[2025-10-12 05:41:58] 2025-10-12 03:41:43,942 | INFO     | all workflow threads have been joined
[2025-10-12 05:41:58] 2025-10-12 03:41:43,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:41:58] 2025-10-12 03:41:43,943 | INFO     | traces error code: 0
[2025-10-12 05:41:58] 2025-10-12 03:41:43,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | INFO     | PID=2615339 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:41:58] 2025-10-12 03:41:58,356 | INFO     | [monitor] control thread has ended
[2025-10-12 05:41:58] 2025-10-12 03:41:58,401 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:41:58] 2025-10-12 03:41:58,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:41:58] 2025-10-12 03:41:58,408 [wrapper] pilotpid: 2615339
[2025-10-12 05:41:58] 2025-10-12 03:41:58,410 [wrapper] Pilot exit status: 0
[2025-10-12 05:41:58] 2025-10-12 03:41:58,419 [wrapper] pandaids: 6838365113
[2025-10-12 05:41:58] 2025-10-12 03:41:58,435 [wrapper] cleanup supervisor_pilot 2636500 2615340
[2025-10-12 05:41:58] 2025-10-12 03:41:58,439 [wrapper] Test setup, not cleaning
[2025-10-12 05:41:58] 2025-10-12 03:41:58,441 [wrapper] apfmon messages muted
[2025-10-12 05:41:58] 2025-10-12 03:41:58,444 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:41:58] 2025-10-12 03:41:58,446 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:41:58]  *** Error codes and diagnostics ***
[2025-10-12 05:41:58]     "exeErrorCode": 0,
[2025-10-12 05:41:58]     "exeErrorDiag": "",
[2025-10-12 05:41:58]     "pilotErrorCode": 0,
[2025-10-12 05:41:58]     "pilotErrorDiag": "",
[2025-10-12 05:41:58]  *** Listing of results directory ***
[2025-10-12 05:41:58] total 405040
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc    557409 Oct 11 13:04 pilot3.tar.gz
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      5112 Oct 11 13:18 queuedata.json
[2025-10-12 05:41:58] -rwx------ 1 boinc boinc     36292 Oct 11 13:20 runpilot2-wrapper.sh
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc       100 Oct 12 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:41:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 04:11 run_atlas
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc       105 Oct 12 04:11 job.xml
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc 218935248 Oct 12 04:11 EVNT.46676267._002270.pool.root.1
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc    569685 Oct 12 04:11 input.tar.gz
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:11 start_atlas.sh
[2025-10-12 05:41:58] drwxrwx--x 2 boinc boinc      4096 Oct 12 04:11 shared
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:11 boinc_setup_complete
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      6200 Oct 12 04:11 init_data.xml
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:11 boinc_lockfile
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      2550 Oct 12 04:11 pandaJob.out
[2025-10-12 05:41:58] -rw------- 1 boinc boinc    975496 Oct 12 04:11 agis_schedconf.cvmfs.json
[2025-10-12 05:41:58] -rw------- 1 boinc boinc   1560580 Oct 12 04:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:41:58] drwx------ 5 boinc boinc      4096 Oct 12 04:11 pilot3
[2025-10-12 05:41:58] -rw------- 1 boinc boinc 189844172 Oct 12 05:40 HITS.46676269._056645.pool.root.1
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc       530 Oct 12 05:40 boinc_task_state.xml
[2025-10-12 05:41:58] -rw------- 1 boinc boinc      1019 Oct 12 05:41 memory_monitor_summary.json
[2025-10-12 05:41:58] -rw------- 1 boinc boinc    259506 Oct 12 05:41 log.46676269._056645.job.log.tgz.1
[2025-10-12 05:41:58] -rw------- 1 boinc boinc      7763 Oct 12 05:41 heartbeat.json
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc        27 Oct 12 05:41 wrapper_checkpoint.txt
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:41 boinc_mmap_file
[2025-10-12 05:41:58] -rw------- 1 boinc boinc       747 Oct 12 05:41 pilotlog.txt
[2025-10-12 05:41:58] -rw------- 1 boinc boinc        95 Oct 12 05:41 pilot_heartbeat.json
[2025-10-12 05:41:58] -rw------- 1 boinc boinc    787632 Oct 12 05:41 log.46676269._056645.job.log.1
[2025-10-12 05:41:58] -rw------- 1 boinc boinc       357 Oct 12 05:41 output.list
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:41 runtime_log
[2025-10-12 05:41:58] -rw------- 1 boinc boinc   1064960 Oct 12 05:41 result.tar.gz
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      8797 Oct 12 05:41 runtime_log.err
[2025-10-12 05:41:58] -rw------- 1 boinc boinc       662 Oct 12 05:41 YyhLDmOpmR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZHgNDm4EtAVn.diag
[2025-10-12 05:41:58] -rw-r--r-- 1 boinc boinc      8989 Oct 12 05:41 stderr.txt
[2025-10-12 05:41:58] HITS file was successfully produced:
[2025-10-12 05:41:58] -rw------- 1 boinc boinc 189844172 Oct 12 05:40 shared/HITS.pool.root.1
[2025-10-12 05:41:58]  *** Contents of shared directory: ***
[2025-10-12 05:41:58] total 400824
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc 218935248 Oct 12 04:11 ATLAS.root_0
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc    569685 Oct 12 04:11 input.tar.gz
[2025-10-12 05:41:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:11 start_atlas.sh
[2025-10-12 05:41:58] -rw------- 1 boinc boinc 189844172 Oct 12 05:40 HITS.pool.root.1
[2025-10-12 05:41:58] -rw------- 1 boinc boinc   1064960 Oct 12 05:41 result.tar.gz
05:41:59 (2611595): run_atlas exited; CPU time 15429.112129
05:41:59 (2611595): called boinc_finish(0)

</stderr_txt>
]]>

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