Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:52:51 (3462053): wrapper (7.7.26015): starting
17:52:51 (3462053): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:52:51] Arguments: --nthreads 12
[2025-10-11 17:52:51] Threads: 12
[2025-10-11 17:52:51] Checking for CVMFS
[2025-10-11 17:52:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:52:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:52:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:52:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:52:51] 2.13.2.0 3843265 3588 58224 151599 1 188 3276282 6144000 3668 130560 0 21290650 99.998 243054 468 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 17:52:51] CVMFS is ok
[2025-10-11 17:52:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:52:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 17:52:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 17:52:51] Further information can be found at the LHC@home message board.
[2025-10-11 17:52:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:52:51] Checking for apptainer binary...
[2025-10-11 17:52:51] apptainer is not installed, using version from CVMFS
[2025-10-11 17:52:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:52:52] XeonFire
[2025-10-11 17:52:52] apptainer works
[2025-10-11 17:52:52] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:52:52] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:52:52] Starting ATLAS job with PandaID=6838119181
[2025-10-11 17:52:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:43:45]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:43:45]  replicas=None
[2025-10-11 18:43:45]  scope=mc23_13p6TeV
[2025-10-11 18:43:45]  status=None
[2025-10-11 18:43:45]  status_code=0
[2025-10-11 18:43:45]  storage_token=
[2025-10-11 18:43:45]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6838119181/log.46676269._052569.job.log.tgz.1
[2025-10-11 18:43:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/ca/log.46676269._052569.job.log.tgz.1
[2025-10-11 18:43:45]  workdir=None
[2025-10-11 18:43:45] ]
[2025-10-11 18:43:45] 2025-10-11 23:43:05,031 | INFO     | transferring file log.46676269._052569.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6838119181/log.46676269._052569.job.log.tgz.1 to /var/lib/boinc
[2025-10-11 18:43:45] 2025-10-11 23:43:05,032 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6838119181/log.46676269._052569.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-11 18:43:45] 2025-10-11 23:43:05,055 | INFO     | adding to output.list: log.46676269._052569.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/ca/log.46676269._052569.job.log.tg
[2025-10-11 18:43:45] 2025-10-11 23:43:05,056 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 18:43:45] 2025-10-11 23:43:05,056 | INFO     | summary of transferred files:
[2025-10-11 18:43:45] 2025-10-11 23:43:05,056 | INFO     |  -- lfn=log.46676269._052569.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 18:43:45] 2025-10-11 23:43:05,056 | INFO     | stage-out finished correctly
[2025-10-11 18:43:45] 2025-10-11 23:43:05,169 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 18:43:45] 2025-10-11 23:43:05,180 | INFO     | time since job start (2988s) is within the limit (172800.0s)
[2025-10-11 18:43:45] 2025-10-11 23:43:06,394 | INFO     | monitor loop #222: job 0:6838119181 is in state 'finished'
[2025-10-11 18:43:45] 2025-10-11 23:43:06,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:43:45] 2025-10-11 23:43:07,201 | INFO     | time since job start (2990s) is within the limit (172800.0s)
[2025-10-11 18:43:45] 2025-10-11 23:43:07,956 | INFO     | job 6838119181 has state=finished
[2025-10-11 18:43:45] 2025-10-11 23:43:07,956 | INFO     | preparing for final server update for job 6838119181 in state='finished'
[2025-10-11 18:43:45] 2025-10-11 23:43:07,957 | INFO     | this job has now completed (state=finished)
[2025-10-11 18:43:45] 2025-10-11 23:43:07,957 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 18:43:45] 2025-10-11 23:43:07,957 | INFO     | log transfer has been attempted: DONE
[2025-10-11 18:43:45] 2025-10-11 23:43:07,958 | INFO     | job 6838119181 has finished - writing final server update
[2025-10-11 18:43:45] 2025-10-11 23:43:07,958 | INFO     | total number of processed events: 400 (read)
[2025-10-11 18:43:45] 2025-10-11 23:43:07,959 | INFO     | executing command: lscpu
[2025-10-11 18:43:45] 2025-10-11 23:43:08,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 18:43:45] 2025-10-11 23:43:08,898 | INFO     | monitor loop #223: job 0:6838119181 is in state 'finished'
[2025-10-11 18:43:45] 2025-10-11 23:43:08,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:43:45] 2025-10-11 23:43:09,207 | INFO     | time since job start (2992s) is within the limit (172800.0s)
[2025-10-11 18:43:45] 2025-10-11 23:43:11,212 | INFO     | time since job start (2994s) is within the limit (172800.0s)
[2025-10-11 18:43:45] 2025-10-11 23:43:11,401 | INFO     | monitor loop #224: job 0:6838119181 is in state 'finished'
[2025-10-11 18:43:45] 2025-10-11 23:43:11,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,512 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 18:43:45] 2025-10-11 23:43:12,527 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2231.3503295454548
[2025-10-11 18:43:45] 2025-10-11 23:43:12,543 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6838119181/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,544 | INFO     | extracted standard info from prmon json
[2025-10-11 18:43:45] 2025-10-11 23:43:12,544 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:43:45] 2025-10-11 23:43:12,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:43:45] 2025-10-11 23:43:12,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:43:45] 2025-10-11 23:43:12,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:43:45] 2025-10-11 23:43:12,546 | INFO     | fitting pss+swap vs Time
[2025-10-11 18:43:45] 2025-10-11 23:43:12,546 | INFO     | sum of square deviations: 22960430.5
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | sum of deviations: -860992918.0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | mean x: 1760224780.5
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | mean y: 2705028.1904761903
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | -- intersect: 66009353731.863716
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | intersect: 66009353731.863716
[2025-10-11 18:43:45] 2025-10-11 23:43:12,547 | INFO     | chi2: 0.004250055224132292
[2025-10-11 18:43:45] 2025-10-11 23:43:12,548 | INFO     | -- intersect: 66009353731.863716
[2025-10-11 18:43:45] 2025-10-11 23:43:12,548 | INFO     | current memory leak: -37.50 B/s (using 42 data points, chi2=0.00)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,548 | INFO     | could have reported an average CPU frequency of 2349 MHz (5 samples)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,548 | INFO     | ..............................
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . Timing measurements:
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . get job = 0 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . initial setup = 14 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . payload setup = 6 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . stage-in = 0 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . payload execution = 2959 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . stage-out = 0 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | . log creation = 0 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,549 | INFO     | ..............................
[2025-10-11 18:43:45] 2025-10-11 23:43:12,659 | INFO     | 
[2025-10-11 18:43:45] 2025-10-11 23:43:12,659 | INFO     | job summary report
[2025-10-11 18:43:45] 2025-10-11 23:43:12,659 | INFO     | --------------------------------------------------
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | PanDA job id: 6838119181
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | task id: 46676269
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | errors: (none)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | pilot state: finished 
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | transexitcode: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | exeerrorcode: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,660 | INFO     | exeerrordiag: 
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | exitcode: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | exitmsg: OK
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | cpuconsumptiontime: 31675 s
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | nevents: 400
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | neventsw: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | pid: 3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | pgrp: 3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:12,661 | INFO     | corecount: 12
[2025-10-11 18:43:45] 2025-10-11 23:43:12,662 | INFO     | event service: False
[2025-10-11 18:43:45] 2025-10-11 23:43:12,662 | INFO     | sizes: {0: 2348862, 5: 2349124, 11: 2349180, 2969: 2374435, 2971: 2383503, 2979: 2383673}
[2025-10-11 18:43:45] 2025-10-11 23:43:12,662 | INFO     | --------------------------------------------------
[2025-10-11 18:43:45] 2025-10-11 23:43:12,662 | INFO     | 
[2025-10-11 18:43:45] 2025-10-11 23:43:12,662 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-11 18:43:45] 2025-10-11 23:43:12,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:43:45] 2025-10-11 23:43:12,687 | INFO     | job 6838119181 has completed (purged errors)
[2025-10-11 18:43:45] 2025-10-11 23:43:12,688 | INFO     | overall cleanup function is called
[2025-10-11 18:43:45] 2025-10-11 23:43:13,697 | INFO     | --- collectZombieJob: --- 10, [3473153]
[2025-10-11 18:43:45] 2025-10-11 23:43:13,697 | INFO     | zombie collector waiting for pid 3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:13,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:43:45] 2025-10-11 23:43:13,697 | INFO     | collected zombie processes
[2025-10-11 18:43:45] 2025-10-11 23:43:13,697 | INFO     | will attempt to kill all subprocesses of pid=3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:14,091 | INFO     | process IDs to be killed: [3473153] (in reverse order)
[2025-10-11 18:43:45] 2025-10-11 23:43:14,211 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:43:45] 2025-10-11 23:43:14,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:43:45] 2025-10-11 23:43:14,221 | INFO     | did not find any defunct processes belonging to 3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:14,230 | INFO     | did not find any defunct processes belonging to 3473153
[2025-10-11 18:43:45] 2025-10-11 23:43:14,230 | INFO     | ready for new job
[2025-10-11 18:43:45] 2025-10-11 23:43:14,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:43:45] 2025-10-11 23:43:14,232 | INFO     | ***************************************
[2025-10-11 18:43:45] 2025-10-11 23:43:14,232 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:43:45] 2025-10-11 23:43:14,232 | INFO     | ***************************************
[2025-10-11 18:43:45] 2025-10-11 23:43:14,232 | INFO     | 
[2025-10-11 18:43:45] 2025-10-11 23:43:14,237 | INFO     | architecture information:
[2025-10-11 18:43:45] 2025-10-11 23:43:14,238 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:43:45] 2025-10-11 23:43:14,256 | INFO     | cat /etc/os-release:
[2025-10-11 18:43:45] NAME="CentOS Linux"
[2025-10-11 18:43:45] VERSION="7 (Core)"
[2025-10-11 18:43:45] ID="centos"
[2025-10-11 18:43:45] ID_LIKE="rhel fedora"
[2025-10-11 18:43:45] VERSION_ID="7"
[2025-10-11 18:43:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:43:45] ANSI_COLOR="0;31"
[2025-10-11 18:43:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:43:45] HOME_URL="https://www.centos.org/"
[2025-10-11 18:43:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:43:45] 
[2025-10-11 18:43:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:43:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:43:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:43:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:43:45] 
[2025-10-11 18:43:45] 2025-10-11 23:43:14,256 | INFO     | ***************************************
[2025-10-11 18:43:45] 2025-10-11 23:43:14,759 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-11 18:43:45] 2025-10-11 23:43:14,776 | INFO     | sufficient remaining disk space (1816971444224 B)
[2025-10-11 18:43:45] 2025-10-11 23:43:14,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:43:45] 2025-10-11 23:43:14,777 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:43:45] 2025-10-11 23:43:14,777 | INFO     | update_server=False
[2025-10-11 18:43:45] 2025-10-11 23:43:14,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:43:45] 2025-10-11 23:43:14,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:43:45] 2025-10-11 23:43:14,910 | INFO     | aborting loop
[2025-10-11 18:43:45] 2025-10-11 23:43:15,202 | INFO     | all payload control threads have been joined
[2025-10-11 18:43:45] 2025-10-11 23:43:15,471 | INFO     | all data control threads have been joined
[2025-10-11 18:43:45] 2025-10-11 23:43:15,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:43:45] 2025-10-11 23:43:15,783 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:15,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:43:45] 2025-10-11 23:43:15,915 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,084 | INFO     | all job control threads have been joined
[2025-10-11 18:43:45] 2025-10-11 23:43:16,136 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,208 | INFO     | [payload] control thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,409 | INFO     | [job] validate thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,475 | INFO     | [data] control thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:16,713 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,001 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,087 | INFO     | [job] control thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,130 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,271 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,301 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:17,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:43:45] 2025-10-11 23:43:17,688 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:18,675 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:19,791 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:43:45] 2025-10-11 23:43:21,214 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:43:45] 2025-10-11 23:43:22,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134503121467200)>', '<ExcThread(monitor, started 134502579947264)>']
[2025-10-11 18:43:45] 2025-10-11 23:43:27,244 | INFO     | all workflow threads have been joined
[2025-10-11 18:43:45] 2025-10-11 23:43:27,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:43:45] 2025-10-11 23:43:27,245 | INFO     | traces error code: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:27,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:43:45] 2025-10-11 23:43:44,801 | INFO     | PID=3466117 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:43:45] 2025-10-11 23:43:44,801 | INFO     | .. there are 5 such processes running
[2025-10-11 18:43:45] 2025-10-11 23:43:44,802 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:43:45] 2025-10-11 23:43:44,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:43:45] 2025-10-11 23:43:44,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:43:45] 2025-10-11 23:43:44,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:43:45] 2025-10-11 23:43:44,802 | INFO     | [monitor] control thread has ended
[2025-10-11 18:43:45] 2025-10-11 23:43:44,933 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:43:45] 2025-10-11 23:43:44,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:43:45] 2025-10-11 23:43:44,938 [wrapper] pilotpid: 3466117
[2025-10-11 18:43:45] 2025-10-11 23:43:44,940 [wrapper] Pilot exit status: 0
[2025-10-11 18:43:45] 2025-10-11 23:43:44,951 [wrapper] pandaids: 6838119181
[2025-10-11 18:43:45] 2025-10-11 23:43:44,994 [wrapper] cleanup supervisor_pilot 3576525 3466118
[2025-10-11 18:43:45] 2025-10-11 23:43:44,996 [wrapper] Test setup, not cleaning
[2025-10-11 18:43:45] 2025-10-11 23:43:44,999 [wrapper] apfmon messages muted
[2025-10-11 18:43:45] 2025-10-11 23:43:45,001 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:43:45] 2025-10-11 23:43:45,003 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:43:45]  *** Error codes and diagnostics ***
[2025-10-11 18:43:45]     "exeErrorCode": 0,
[2025-10-11 18:43:45]     "exeErrorDiag": "",
[2025-10-11 18:43:45]     "pilotErrorCode": 0,
[2025-10-11 18:43:45]     "pilotErrorDiag": "",
[2025-10-11 18:43:45]  *** Listing of results directory ***
[2025-10-11 18:43:45] total 412672
[2025-10-11 18:43:45] -rw-r--r-- 1 mark mark    557409 Oct 11 01:24 pilot3.tar.gz
[2025-10-11 18:43:45] -rw-r--r-- 1 mark mark      5112 Oct 11 01:33 queuedata.json
[2025-10-11 18:43:45] -rwx------ 1 mark mark     36292 Oct 11 01:34 runpilot2-wrapper.sh
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark       100 Oct 11 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:43:45] -rwxr-xr-x 1 mark mark      7986 Oct 11 17:52 run_atlas
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark       105 Oct 11 17:52 job.xml
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark 223169839 Oct 11 17:52 EVNT.46676267._002113.pool.root.1
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark     15120 Oct 11 17:52 start_atlas.sh
[2025-10-11 18:43:45] drwxrwx--x 2 mark mark      4096 Oct 11 17:52 shared
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark    569678 Oct 11 17:52 input.tar.gz
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark      9341 Oct 11 17:52 init_data.xml
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark         0 Oct 11 17:52 boinc_setup_complete
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark         0 Oct 11 17:52 boinc_lockfile
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark      2549 Oct 11 17:52 pandaJob.out
[2025-10-11 18:43:45] -rw------- 1 mark mark    975520 Oct 11 17:53 agis_schedconf.cvmfs.json
[2025-10-11 18:43:45] -rw------- 1 mark mark   1560580 Oct 11 17:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:43:45] drwx------ 5 mark mark      4096 Oct 11 17:53 pilot3
[2025-10-11 18:43:45] -rw------- 1 mark mark 193877966 Oct 11 18:42 HITS.46676269._052569.pool.root.1
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark       529 Oct 11 18:42 boinc_task_state.xml
[2025-10-11 18:43:45] -rw------- 1 mark mark      1032 Oct 11 18:42 memory_monitor_summary.json
[2025-10-11 18:43:45] -rw------- 1 mark mark    349128 Oct 11 18:43 log.46676269._052569.job.log.tgz.1
[2025-10-11 18:43:45] -rw------- 1 mark mark        95 Oct 11 18:43 pilot_heartbeat.json
[2025-10-11 18:43:45] -rw------- 1 mark mark      7787 Oct 11 18:43 heartbeat.json
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark      8192 Oct 11 18:43 boinc_mmap_file
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark        27 Oct 11 18:43 wrapper_checkpoint.txt
[2025-10-11 18:43:45] -rw------- 1 mark mark       822 Oct 11 18:43 pilotlog.txt
[2025-10-11 18:43:45] -rw------- 1 mark mark    459733 Oct 11 18:43 log.46676269._052569.job.log.1
[2025-10-11 18:43:45] -rw------- 1 mark mark       357 Oct 11 18:43 output.list
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark       620 Oct 11 18:43 runtime_log
[2025-10-11 18:43:45] -rw------- 1 mark mark    829440 Oct 11 18:43 result.tar.gz
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark      8759 Oct 11 18:43 runtime_log.err
[2025-10-11 18:43:45] -rw------- 1 mark mark       644 Oct 11 18:43 gfJLDmuMiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaNRMDmvqn9Nn.diag
[2025-10-11 18:43:45] -rw-rw-r-- 1 mark mark     21952 Oct 11 18:43 stderr.txt
[2025-10-11 18:43:45] HITS file was successfully produced:
[2025-10-11 18:43:45] -rw------- 1 mark mark 193877966 Oct 11 18:42 shared/HITS.pool.root.1
[2025-10-11 18:43:45]  *** Contents of shared directory: ***
[2025-10-11 18:43:45] total 408672
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark 223169839 Oct 11 17:52 ATLAS.root_0
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark     15120 Oct 11 17:52 start_atlas.sh
[2025-10-11 18:43:45] -rw-r--r-- 2 mark mark    569678 Oct 11 17:52 input.tar.gz
[2025-10-11 18:43:45] -rw------- 1 mark mark 193877966 Oct 11 18:42 HITS.pool.root.1
[2025-10-11 18:43:45] -rw------- 1 mark mark    829440 Oct 11 18:43 result.tar.gz
18:43:46 (3462053): run_atlas exited; CPU time 31792.025046
18:43:46 (3462053): called boinc_finish(0)

</stderr_txt>
]]>

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