Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
17:00:48 (2451425): wrapper (7.7.26015): starting
17:00:48 (2451425): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 17:00:48] Arguments: --nthreads 12
[2025-10-11 17:00:48] Threads: 12
[2025-10-11 17:00:48] Checking for CVMFS
[2025-10-11 17:00:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:00:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:00:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:00:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:00:49] 2.11.0.0 3299214 1894 84696 151590 0 188 5180295 6144000 13825 130560 0 37140318 100.000 68624 199 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 17:00:49] CVMFS is ok
[2025-10-11 17:00:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:00:49] Checking for apptainer binary...
[2025-10-11 17:00:49] apptainer is not installed, using version from CVMFS
[2025-10-11 17:00:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:00:49] radiat0r
[2025-10-11 17:00:49] apptainer works
[2025-10-11 17:00:49] Set ATHENA_PROC_NUMBER=12
[2025-10-11 17:00:49] Set ATHENA_CORE_NUMBER=12
[2025-10-11 17:00:49] Starting ATLAS job with PandaID=6838199966
[2025-10-11 17:00:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:53:39]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:53:39]  status=None
[2025-10-11 17:53:39]  status_code=0
[2025-10-11 17:53:39]  storage_token=
[2025-10-11 17:53:39]  surl=/var/lib/boinc/slots/22/PanDA_Pilot-6838199966/log.46676269._053717.job.log.tgz.1
[2025-10-11 17:53:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/c4/log.46676269._053717.job.log.tgz.1
[2025-10-11 17:53:39]  workdir=None
[2025-10-11 17:53:39] ]
[2025-10-11 17:53:39] 2025-10-11 17:52:58,723 | INFO     | transferring file log.46676269._053717.job.log.tgz.1 from /var/lib/boinc/slots/22/PanDA_Pilot-6838199966/log.46676269._053717.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 17:53:39] 2025-10-11 17:52:58,724 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/22/PanDA_Pilot-6838199966/log.46676269._053717.job.log.tgz.1 /var/lib/boinc/slots/22/log.46676269._053717.j
[2025-10-11 17:53:39] 2025-10-11 17:52:58,756 | INFO     | adding to output.list: log.46676269._053717.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/c4/log.46676269._053717.job.log.tg
[2025-10-11 17:53:39] 2025-10-11 17:52:58,757 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 17:53:39] 2025-10-11 17:52:58,758 | INFO     | summary of transferred files:
[2025-10-11 17:53:39] 2025-10-11 17:52:58,758 | INFO     |  -- lfn=log.46676269._053717.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 17:53:39] 2025-10-11 17:52:58,758 | INFO     | stage-out finished correctly
[2025-10-11 17:53:39] 2025-10-11 17:52:59,427 | INFO     | time since job start (3113s) is within the limit (172800.0s)
[2025-10-11 17:53:39] 2025-10-11 17:52:59,817 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 17:53:39] 2025-10-11 17:53:00,466 | INFO     | job 6838199966 has state=finished
[2025-10-11 17:53:39] 2025-10-11 17:53:00,467 | INFO     | preparing for final server update for job 6838199966 in state='finished'
[2025-10-11 17:53:39] 2025-10-11 17:53:00,467 | INFO     | this job has now completed (state=finished)
[2025-10-11 17:53:39] 2025-10-11 17:53:00,467 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 17:53:39] 2025-10-11 17:53:00,468 | INFO     | log transfer has been attempted: DONE
[2025-10-11 17:53:39] 2025-10-11 17:53:00,468 | INFO     | job 6838199966 has finished - writing final server update
[2025-10-11 17:53:39] 2025-10-11 17:53:00,468 | INFO     | total number of processed events: 400 (read)
[2025-10-11 17:53:39] 2025-10-11 17:53:00,469 | INFO     | executing command: lscpu
[2025-10-11 17:53:39] 2025-10-11 17:53:00,663 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 17:53:39] 2025-10-11 17:53:01,433 | INFO     | time since job start (3115s) is within the limit (172800.0s)
[2025-10-11 17:53:39] 2025-10-11 17:53:01,491 | WARNING  | process 2476340 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 17:53:39] 2025-10-11 17:53:01,492 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6838199966/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:53:39] 2025-10-11 17:53:02,295 | INFO     | number of running child processes to parent process 2476340: 1
[2025-10-11 17:53:39] 2025-10-11 17:53:02,295 | INFO     | maximum number of monitored processes: 6
[2025-10-11 17:53:39] 2025-10-11 17:53:03,439 | INFO     | time since job start (3117s) is within the limit (172800.0s)
[2025-10-11 17:53:39] 2025-10-11 17:53:04,798 | INFO     | monitor loop #217: job 0:6838199966 is in state 'finished'
[2025-10-11 17:53:39] 2025-10-11 17:53:04,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:53:39] 2025-10-11 17:53:05,444 | INFO     | time since job start (3119s) is within the limit (172800.0s)
[2025-10-11 17:53:39] 2025-10-11 17:53:06,875 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:53:39] 2025-10-11 17:53:06,938 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2297.301957031251
[2025-10-11 17:53:39] 2025-10-11 17:53:07,032 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6838199966/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,033 | INFO     | extracted standard info from prmon json
[2025-10-11 17:53:39] 2025-10-11 17:53:07,033 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:53:39] 2025-10-11 17:53:07,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:53:39] 2025-10-11 17:53:07,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:53:39] 2025-10-11 17:53:07,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:53:39] 2025-10-11 17:53:07,035 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:53:39] 2025-10-11 17:53:07,035 | INFO     | sum of square deviations: 26400495.0
[2025-10-11 17:53:39] 2025-10-11 17:53:07,035 | INFO     | sum of deviations: 513694938.5
[2025-10-11 17:53:39] 2025-10-11 17:53:07,035 | INFO     | mean x: 1760203717.5
[2025-10-11 17:53:39] 2025-10-11 17:53:07,035 | INFO     | mean y: 2661474.9318181816
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | -- intersect: -34246989541.408363
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | intersect: -34246989541.408363
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | chi2: 0.0008783363378887096
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | -- intersect: -34246989541.408363
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | current memory leak: 19.46 B/s (using 44 data points, chi2=0.00)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,036 | INFO     | could have reported an average CPU frequency of 2356 MHz (5 samples)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | ..............................
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . Timing measurements:
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . get job = 0 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . initial setup = 3 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . payload setup = 8 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . stage-in = 0 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . payload execution = 3079 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . stage-out = 0 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | . log creation = 0 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,037 | INFO     | ..............................
[2025-10-11 17:53:39] 2025-10-11 17:53:07,137 | INFO     | 
[2025-10-11 17:53:39] 2025-10-11 17:53:07,137 | INFO     | job summary report
[2025-10-11 17:53:39] 2025-10-11 17:53:07,137 | INFO     | --------------------------------------------------
[2025-10-11 17:53:39] 2025-10-11 17:53:07,137 | INFO     | PanDA job id: 6838199966
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | task id: 46676269
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | errors: (none)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | pilot state: finished 
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | transexitcode: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | exeerrorcode: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | exeerrordiag: 
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | exitcode: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | exitmsg: OK
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | cpuconsumptiontime: 33117 s
[2025-10-11 17:53:39] 2025-10-11 17:53:07,138 | INFO     | nevents: 400
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | neventsw: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | pid: 2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | pgrp: 2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | corecount: 12
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | event service: False
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | sizes: {0: 2348858, 1: 2348858, 8: 2349148, 11: 2349176, 3091: 2374719, 3093: 2383719, 3094: 2383903, 3101: 2384129}
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | --------------------------------------------------
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | 
[2025-10-11 17:53:39] 2025-10-11 17:53:07,139 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2025-10-11 17:53:39] 2025-10-11 17:53:07,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | job 6838199966 has completed (purged errors)
[2025-10-11 17:53:39] 2025-10-11 17:53:07,172 | INFO     | overall cleanup function is called
[2025-10-11 17:53:39] 2025-10-11 17:53:08,178 | INFO     | --- collectZombieJob: --- 10, [2476340]
[2025-10-11 17:53:39] 2025-10-11 17:53:08,178 | INFO     | zombie collector waiting for pid 2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:08,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:53:39] 2025-10-11 17:53:08,179 | INFO     | collected zombie processes
[2025-10-11 17:53:39] 2025-10-11 17:53:08,179 | INFO     | will attempt to kill all subprocesses of pid=2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:08,922 | INFO     | process IDs to be killed: [2476340] (in reverse order)
[2025-10-11 17:53:39] 2025-10-11 17:53:09,138 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:53:39] 2025-10-11 17:53:09,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:53:39] 2025-10-11 17:53:09,159 | INFO     | did not find any defunct processes belonging to 2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:09,179 | INFO     | did not find any defunct processes belonging to 2476340
[2025-10-11 17:53:39] 2025-10-11 17:53:09,179 | INFO     | ready for new job
[2025-10-11 17:53:39] 2025-10-11 17:53:09,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:53:39] 2025-10-11 17:53:09,181 | INFO     | ***************************************
[2025-10-11 17:53:39] 2025-10-11 17:53:09,181 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:53:39] 2025-10-11 17:53:09,181 | INFO     | ***************************************
[2025-10-11 17:53:39] 2025-10-11 17:53:09,181 | INFO     | 
[2025-10-11 17:53:39] 2025-10-11 17:53:09,212 | INFO     | architecture information:
[2025-10-11 17:53:39] 2025-10-11 17:53:09,212 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:53:39] 2025-10-11 17:53:09,237 | INFO     | cat /etc/os-release:
[2025-10-11 17:53:39] NAME="CentOS Linux"
[2025-10-11 17:53:39] VERSION="7 (Core)"
[2025-10-11 17:53:39] ID="centos"
[2025-10-11 17:53:39] ID_LIKE="rhel fedora"
[2025-10-11 17:53:39] VERSION_ID="7"
[2025-10-11 17:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:53:39] ANSI_COLOR="0;31"
[2025-10-11 17:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:53:39] HOME_URL="https://www.centos.org/"
[2025-10-11 17:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:53:39] 
[2025-10-11 17:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:53:39] 
[2025-10-11 17:53:39] 2025-10-11 17:53:09,237 | INFO     | ***************************************
[2025-10-11 17:53:39] 2025-10-11 17:53:09,740 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2025-10-11 17:53:39] 2025-10-11 17:53:09,769 | INFO     | sufficient remaining disk space (1724298297344 B)
[2025-10-11 17:53:39] 2025-10-11 17:53:09,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:53:39] 2025-10-11 17:53:09,769 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:53:39] 2025-10-11 17:53:09,770 | INFO     | update_server=False
[2025-10-11 17:53:39] 2025-10-11 17:53:09,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:53:39] 2025-10-11 17:53:09,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:53:39] 2025-10-11 17:53:09,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:53:39] 2025-10-11 17:53:09,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:53:39] 2025-10-11 17:53:09,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:53:39] 2025-10-11 17:53:09,810 | INFO     | will abort loop
[2025-10-11 17:53:39] 2025-10-11 17:53:09,883 | INFO     | all payload control threads have been joined
[2025-10-11 17:53:39] 2025-10-11 17:53:10,046 | INFO     | all data control threads have been joined
[2025-10-11 17:53:39] 2025-10-11 17:53:10,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:53:39] 2025-10-11 17:53:10,775 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:10,814 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:10,826 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:53:39] 2025-10-11 17:53:10,889 | INFO     | [payload] control thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:10,962 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,050 | INFO     | [data] control thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,106 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,107 | INFO     | [job] validate thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,330 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,331 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,380 | INFO     | all job control threads have been joined
[2025-10-11 17:53:39] 2025-10-11 17:53:11,446 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:11,776 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:12,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:53:39] 2025-10-11 17:53:12,246 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:12,382 | INFO     | [job] control thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:13,146 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:14,425 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:53:39] 2025-10-11 17:53:15,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889643173696)>', '<ExcThread(monitor, started 139889207133952)>']
[2025-10-11 17:53:39] 2025-10-11 17:53:20,921 | INFO     | all workflow threads have been joined
[2025-10-11 17:53:39] 2025-10-11 17:53:20,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:53:39] 2025-10-11 17:53:20,922 | INFO     | traces error code: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:20,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:53:39] 2025-10-11 17:53:39,278 | INFO     | PID=2458470 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 17:53:39] 2025-10-11 17:53:39,278 | INFO     | .. there are 17 such processes running
[2025-10-11 17:53:39] 2025-10-11 17:53:39,279 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:53:39] 2025-10-11 17:53:39,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:53:39] 2025-10-11 17:53:39,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:53:39] 2025-10-11 17:53:39,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:53:39] 2025-10-11 17:53:39,279 | INFO     | [monitor] control thread has ended
[2025-10-11 17:53:39] 2025-10-11 17:53:39,436 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:53:39] 2025-10-11 17:53:39,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:53:39] 2025-10-11 17:53:39,443 [wrapper] pilotpid: 2458470
[2025-10-11 17:53:39] 2025-10-11 17:53:39,446 [wrapper] Pilot exit status: 0
[2025-10-11 17:53:39] 2025-10-11 17:53:39,458 [wrapper] pandaids: 6838199966
[2025-10-11 17:53:39] 2025-10-11 17:53:39,636 [wrapper] cleanup supervisor_pilot 2864273 2458471
[2025-10-11 17:53:39] 2025-10-11 17:53:39,640 [wrapper] Test setup, not cleaning
[2025-10-11 17:53:39] 2025-10-11 17:53:39,643 [wrapper] apfmon messages muted
[2025-10-11 17:53:39] 2025-10-11 17:53:39,646 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:53:39] 2025-10-11 17:53:39,650 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:53:39]  *** Error codes and diagnostics ***
[2025-10-11 17:53:39]     "exeErrorCode": 0,
[2025-10-11 17:53:39]     "exeErrorDiag": "",
[2025-10-11 17:53:39]     "pilotErrorCode": 0,
[2025-10-11 17:53:39]     "pilotErrorDiag": "",
[2025-10-11 17:53:39]  *** Listing of results directory ***
[2025-10-11 17:53:39] total 409048
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:43 pilot3.tar.gz
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:46 queuedata.json
[2025-10-11 17:53:39] -rwx------ 1 boinc boinc     36292 Oct 11 07:47 runpilot2-wrapper.sh
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc       100 Oct 11 17:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:53:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 17:00 run_atlas
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc       105 Oct 11 17:00 job.xml
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:00 start_atlas.sh
[2025-10-11 17:53:39] drwxrwx--x 2 boinc boinc      4096 Oct 11 17:00 shared
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc    569686 Oct 11 17:00 input.tar.gz
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc 219737279 Oct 11 17:00 EVNT.46676267._002156.pool.root.1
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc         0 Oct 11 17:00 boinc_setup_complete
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc      9396 Oct 11 17:00 init_data.xml
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc         0 Oct 11 17:00 boinc_lockfile
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc      2550 Oct 11 17:00 pandaJob.out
[2025-10-11 17:53:39] -rw------- 1 boinc boinc    975512 Oct 11 17:01 agis_schedconf.cvmfs.json
[2025-10-11 17:53:39] -rw------- 1 boinc boinc   1560580 Oct 11 17:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:53:39] drwx------ 5 boinc boinc      4096 Oct 11 17:01 pilot3
[2025-10-11 17:53:39] -rw------- 1 boinc boinc 193585163 Oct 11 17:52 HITS.46676269._053717.pool.root.1
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc       530 Oct 11 17:52 boinc_task_state.xml
[2025-10-11 17:53:39] -rw------- 1 boinc boinc        95 Oct 11 17:52 pilot_heartbeat.json
[2025-10-11 17:53:39] -rw------- 1 boinc boinc      1027 Oct 11 17:52 memory_monitor_summary.json
[2025-10-11 17:53:39] -rw------- 1 boinc boinc    353139 Oct 11 17:52 log.46676269._053717.job.log.tgz.1
[2025-10-11 17:53:39] -rw------- 1 boinc boinc      7742 Oct 11 17:53 heartbeat.json
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc        27 Oct 11 17:53 wrapper_checkpoint.txt
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc      8192 Oct 11 17:53 boinc_mmap_file
[2025-10-11 17:53:39] -rw------- 1 boinc boinc       824 Oct 11 17:53 pilotlog.txt
[2025-10-11 17:53:39] -rw------- 1 boinc boinc    462708 Oct 11 17:53 log.46676269._053717.job.log.1
[2025-10-11 17:53:39] -rw------- 1 boinc boinc       357 Oct 11 17:53 output.list
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc       620 Oct 11 17:53 runtime_log
[2025-10-11 17:53:39] -rw------- 1 boinc boinc    839680 Oct 11 17:53 result.tar.gz
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc      8672 Oct 11 17:53 runtime_log.err
[2025-10-11 17:53:39] -rw------- 1 boinc boinc       644 Oct 11 17:53 0TGODm7UjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6mfNDmnuqiTo.diag
[2025-10-11 17:53:39] -rw-r--r-- 1 boinc boinc     21735 Oct 11 17:53 stderr.txt
[2025-10-11 17:53:39] HITS file was successfully produced:
[2025-10-11 17:53:39] -rw------- 1 boinc boinc 193585163 Oct 11 17:52 shared/HITS.pool.root.1
[2025-10-11 17:53:39]  *** Contents of shared directory: ***
[2025-10-11 17:53:39] total 405044
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:00 start_atlas.sh
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc    569686 Oct 11 17:00 input.tar.gz
[2025-10-11 17:53:39] -rw-r--r-- 2 boinc boinc 219737279 Oct 11 17:00 ATLAS.root_0
[2025-10-11 17:53:39] -rw------- 1 boinc boinc 193585163 Oct 11 17:52 HITS.pool.root.1
[2025-10-11 17:53:39] -rw------- 1 boinc boinc    839680 Oct 11 17:53 result.tar.gz
17:53:41 (2451425): run_atlas exited; CPU time 33313.746579
17:53:41 (2451425): called boinc_finish(0)

</stderr_txt>
]]>

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