Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:57:04 (3077565): wrapper (7.7.26015): starting
03:57:04 (3077565): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 03:57:04] Arguments: --nthreads 4
[2025-10-12 03:57:04] Threads: 4
[2025-10-12 03:57:04] Checking for CVMFS
[2025-10-12 03:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:57:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:57:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:57:04] 2.13.2.0 2183684 2418 54352 151602 2 57 1971900 4194305 1316 130560 26 2348865 95.173 12503619 453 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 03:57:04] CVMFS is ok
[2025-10-12 03:57:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:57:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 03:57:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 03:57:04] Further information can be found at the LHC@home message board.
[2025-10-12 03:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:57:04] Checking for apptainer binary...
[2025-10-12 03:57:04] apptainer is not installed, using version from CVMFS
[2025-10-12 03:57:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:57:21] Ryze
[2025-10-12 03:57:21] apptainer works
[2025-10-12 03:57:21] Set ATHENA_PROC_NUMBER=4
[2025-10-12 03:57:21] Set ATHENA_CORE_NUMBER=4
[2025-10-12 03:57:21] Starting ATLAS job with PandaID=6838452906
[2025-10-12 03:57:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:32:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:32:45] 2025-10-12 04:32:12,143 | INFO     | time since job start (9232s) is within the limit (172800.0s)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,011 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 06:32:45] 2025-10-12 04:32:14,019 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3726.565666666667
[2025-10-12 06:32:45] 2025-10-12 04:32:14,022 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6838452906/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,022 | INFO     | extracted standard info from prmon json
[2025-10-12 06:32:45] 2025-10-12 04:32:14,022 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:32:45] 2025-10-12 04:32:14,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:32:45] 2025-10-12 04:32:14,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:32:45] 2025-10-12 04:32:14,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:32:45] 2025-10-12 04:32:14,024 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:32:45] 2025-10-12 04:32:14,024 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | sum of deviations: 227365117884.49985
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | mean x: 1760238926.5
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | mean y: 1931761.1533333333
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | -- intersect: -382437406995.6224
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | intersect: -382437406995.6224
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | chi2: 26.462618178071622
[2025-10-12 06:32:45] 2025-10-12 04:32:14,025 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | sum of deviations: 217973580546.00003
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | mean x: 1760238774.0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | mean y: 1917600.6689655173
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | -- intersect: -405893050496.5847
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | intersect: -405893050496.5847
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | chi2: 26.179625756039545
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | current chi2=26.179625756039545 (change=1.0694044713481148 %)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | right removable region: 144
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | sum of deviations: 183511643112.0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | mean x: 1760239079.0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | mean y: 1997861.7034482758
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | -- intersect: -341720449630.5663
[2025-10-12 06:32:45] 2025-10-12 04:32:14,026 | INFO     | intersect: -341720449630.5663
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | chi2: 20.005965906544745
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | current chi2=20.005965906544745 (change=24.39914383406406 %)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | left removable region: 10
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | sum of deviations: 134126232394.99998
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | mean x: 1760239048.5
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | mean y: 2053486.6268656717
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | -- intersect: -316456431508.7875
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | intersect: -316456431508.7875
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | chi2: 14.113976118832042
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | -- intersect: -316456431508.7875
[2025-10-12 06:32:45] 2025-10-12 04:32:14,027 | INFO     | current memory leak: 179.78 B/s (using 134 data points, chi2=14.11)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | could have reported an average CPU frequency of 3738 MHz (9 samples)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | sufficient remaining disk space (3169809596416 B)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | ..............................
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | . Timing measurements:
[2025-10-12 06:32:45] 2025-10-12 04:32:14,028 | INFO     | . get job = 0 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . initial setup = 10 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . payload setup = 38 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . stage-in = 0 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . payload execution = 9169 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . stage-out = 0 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | . log creation = 0 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | ..............................
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | size of work directory /var/lib/boinc-client/slots/4/PanDA_Pilot-6838452906: 2360427 B (within 2537553920 B limit)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | pfn file=/var/lib/boinc-client/slots/4/PanDA_Pilot-6838452906/HITS.46676269._058850.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | total size of present files: 0 B (workdir size: 2360427 B)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,029 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/4/PanDA_Pilot-6838452906/HITS.46676269._058850.pool.root.1 since it does not exist
[2025-10-12 06:32:45] 2025-10-12 04:32:14,090 | INFO     | 
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | job summary report
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | --------------------------------------------------
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | PanDA job id: 6838452906
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | task id: 46676269
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | errors: (none)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | pilot state: finished 
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | transexitcode: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | exeerrorcode: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | exeerrordiag: 
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | exitcode: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | exitmsg: OK
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | cpuconsumptiontime: 27752 s
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | nevents: 400
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | neventsw: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | pid: 3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | pgrp: 3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | corecount: 4
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | event service: False
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | sizes: {0: 2348693, 1: 2348892, 4: 2349154, 11: 2349182, 9212: 2386638, 9215: 2386638, 9219: 2387052}
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | --------------------------------------------------
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | 
[2025-10-12 06:32:45] 2025-10-12 04:32:14,091 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 06:32:45] 2025-10-12 04:32:14,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:32:45] 2025-10-12 04:32:14,113 | INFO     | job 6838452906 has completed (purged errors)
[2025-10-12 06:32:45] 2025-10-12 04:32:14,113 | INFO     | overall cleanup function is called
[2025-10-12 06:32:45] 2025-10-12 04:32:14,177 | INFO     | number of running child processes to parent process 3099420: 1
[2025-10-12 06:32:45] 2025-10-12 04:32:14,177 | INFO     | maximum number of monitored processes: 7
[2025-10-12 06:32:45] 2025-10-12 04:32:14,177 | INFO     | aborting job monitoring since job object (job id=6838452906) has expired
[2025-10-12 06:32:45] 2025-10-12 04:32:15,120 | INFO     | --- collectZombieJob: --- 10, [3099420]
[2025-10-12 06:32:45] 2025-10-12 04:32:15,120 | INFO     | zombie collector waiting for pid 3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:15,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:32:45] 2025-10-12 04:32:15,121 | INFO     | collected zombie processes
[2025-10-12 06:32:45] 2025-10-12 04:32:15,121 | INFO     | will attempt to kill all subprocesses of pid=3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:15,199 | INFO     | process IDs to be killed: [3099420] (in reverse order)
[2025-10-12 06:32:45] 2025-10-12 04:32:15,242 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:32:45] 2025-10-12 04:32:15,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:32:45] 2025-10-12 04:32:15,246 | INFO     | did not find any defunct processes belonging to 3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:15,248 | INFO     | did not find any defunct processes belonging to 3099420
[2025-10-12 06:32:45] 2025-10-12 04:32:15,248 | INFO     | ready for new job
[2025-10-12 06:32:45] 2025-10-12 04:32:15,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:32:45] 2025-10-12 04:32:15,249 | INFO     | ***************************************
[2025-10-12 06:32:45] 2025-10-12 04:32:15,249 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:32:45] 2025-10-12 04:32:15,249 | INFO     | ***************************************
[2025-10-12 06:32:45] 2025-10-12 04:32:15,249 | INFO     | 
[2025-10-12 06:32:45] 2025-10-12 04:32:15,250 | INFO     | architecture information:
[2025-10-12 06:32:45] 2025-10-12 04:32:15,250 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:32:45] 2025-10-12 04:32:15,264 | INFO     | cat /etc/os-release:
[2025-10-12 06:32:45] NAME="CentOS Linux"
[2025-10-12 06:32:45] VERSION="7 (Core)"
[2025-10-12 06:32:45] ID="centos"
[2025-10-12 06:32:45] ID_LIKE="rhel fedora"
[2025-10-12 06:32:45] VERSION_ID="7"
[2025-10-12 06:32:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:32:45] ANSI_COLOR="0;31"
[2025-10-12 06:32:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:32:45] HOME_URL="https://www.centos.org/"
[2025-10-12 06:32:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:32:45] 
[2025-10-12 06:32:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:32:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:32:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:32:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:32:45] 
[2025-10-12 06:32:45] 2025-10-12 04:32:15,265 | INFO     | ***************************************
[2025-10-12 06:32:45] 2025-10-12 04:32:15,767 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | INFO     | sufficient remaining disk space (3169812742144 B)
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | INFO     | update_server=False
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:32:45] 2025-10-12 04:32:15,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:32:45] 2025-10-12 04:32:15,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:32:45] 2025-10-12 04:32:15,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:32:45] 2025-10-12 04:32:15,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:32:45] 2025-10-12 04:32:15,781 | INFO     | aborting loop
[2025-10-12 06:32:45] 2025-10-12 04:32:16,335 | INFO     | all data control threads have been joined
[2025-10-12 06:32:45] 2025-10-12 04:32:16,786 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:16,786 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:16,786 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:16,806 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:16,846 | INFO     | all payload control threads have been joined
[2025-10-12 06:32:45] 2025-10-12 04:32:16,900 | INFO     | all job control threads have been joined
[2025-10-12 06:32:45] 2025-10-12 04:32:17,036 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,341 | INFO     | [data] control thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,667 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,717 | INFO     | [job] validate thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,724 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,786 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,851 | INFO     | [payload] control thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,895 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:17,905 | INFO     | [job] control thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:18,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:19,786 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:26,813 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:32:45] 2025-10-12 04:32:27,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:32:45] 2025-10-12 04:32:35,074 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:32:45] 2025-10-12 04:32:36,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136370488067904)>', '<ExcThread(monitor, started 136369926018816)>']
[2025-10-12 06:32:45] 2025-10-12 04:32:41,829 | INFO     | all workflow threads have been joined
[2025-10-12 06:32:45] 2025-10-12 04:32:41,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:32:45] 2025-10-12 04:32:41,829 | INFO     | traces error code: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:41,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:32:45] 2025-10-12 04:32:45,298 | INFO     | PID=3084141 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:32:45] 2025-10-12 04:32:45,298 | INFO     | .. there are 3 such processes running
[2025-10-12 06:32:45] 2025-10-12 04:32:45,299 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:32:45] 2025-10-12 04:32:45,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:32:45] 2025-10-12 04:32:45,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:32:45] 2025-10-12 04:32:45,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:32:45] 2025-10-12 04:32:45,299 | INFO     | [monitor] control thread has ended
[2025-10-12 06:32:45] 2025-10-12 04:32:45,375 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:32:45] 2025-10-12 04:32:45,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:32:45] 2025-10-12 04:32:45,378 [wrapper] pilotpid: 3084141
[2025-10-12 06:32:45] 2025-10-12 04:32:45,379 [wrapper] Pilot exit status: 0
[2025-10-12 06:32:45] 2025-10-12 04:32:45,386 [wrapper] pandaids: 6838452906
[2025-10-12 06:32:45] 2025-10-12 04:32:45,409 [wrapper] cleanup supervisor_pilot 3200556 3084142
[2025-10-12 06:32:45] 2025-10-12 04:32:45,411 [wrapper] Test setup, not cleaning
[2025-10-12 06:32:45] 2025-10-12 04:32:45,413 [wrapper] apfmon messages muted
[2025-10-12 06:32:45] 2025-10-12 04:32:45,414 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:32:45] 2025-10-12 04:32:45,416 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:32:45]  *** Error codes and diagnostics ***
[2025-10-12 06:32:45]     "exeErrorCode": 0,
[2025-10-12 06:32:45]     "exeErrorDiag": "",
[2025-10-12 06:32:45]     "pilotErrorCode": 0,
[2025-10-12 06:32:45]     "pilotErrorDiag": "",
[2025-10-12 06:32:45]  *** Listing of results directory ***
[2025-10-12 06:32:45] insgesamt 414752
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc    557409 Okt 11 15:56 pilot3.tar.gz
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc      5112 Okt 11 15:58 queuedata.json
[2025-10-12 06:32:45] -rwx------ 1 boinc boinc     36292 Okt 11 15:59 runpilot2-wrapper.sh
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc       100 Okt 12 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:32:45] -rwxr-xr-x 1 boinc boinc      7986 Okt 12 03:57 run_atlas
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc       105 Okt 12 03:57 job.xml
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc 220543418 Okt 12 03:57 EVNT.46676267._002360.pool.root.1
[2025-10-12 06:32:45] drwxrwx--x 2 boinc boinc      4096 Okt 12 03:57 shared
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc    569677 Okt 12 03:57 input.tar.gz
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc     15120 Okt 12 03:57 start_atlas.sh
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc         0 Okt 12 03:57 boinc_setup_complete
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc      8874 Okt 12 03:57 init_data.xml
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc         0 Okt 12 03:57 boinc_lockfile
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc      2550 Okt 12 03:57 pandaJob.out
[2025-10-12 06:32:45] -rw------- 1 boinc boinc    975496 Okt 12 03:58 agis_schedconf.cvmfs.json
[2025-10-12 06:32:45] -rw------- 1 boinc boinc   1560580 Okt 12 03:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:32:45] drwx------ 5 boinc boinc      4096 Okt 12 03:58 pilot3
[2025-10-12 06:32:45] -rw------- 1 boinc boinc 196914476 Okt 12 06:31 HITS.46676269._058850.pool.root.1
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc       529 Okt 12 06:32 boinc_task_state.xml
[2025-10-12 06:32:45] -rw------- 1 boinc boinc      1027 Okt 12 06:32 memory_monitor_summary.json
[2025-10-12 06:32:45] -rw------- 1 boinc boinc    319717 Okt 12 06:32 log.46676269._058850.job.log.tgz.1
[2025-10-12 06:32:45] -rw------- 1 boinc boinc      7747 Okt 12 06:32 heartbeat.json
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc        27 Okt 12 06:32 wrapper_checkpoint.txt
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc      8192 Okt 12 06:32 boinc_mmap_file
[2025-10-12 06:32:45] -rw------- 1 boinc boinc       822 Okt 12 06:32 pilotlog.txt
[2025-10-12 06:32:45] -rw------- 1 boinc boinc        95 Okt 12 06:32 pilot_heartbeat.json
[2025-10-12 06:32:45] -rw------- 1 boinc boinc   1349967 Okt 12 06:32 log.46676269._058850.job.log.1
[2025-10-12 06:32:45] -rw------- 1 boinc boinc       357 Okt 12 06:32 output.list
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc       620 Okt 12 06:32 runtime_log
[2025-10-12 06:32:45] -rw------- 1 boinc boinc   1689600 Okt 12 06:32 result.tar.gz
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc      8731 Okt 12 06:32 runtime_log.err
[2025-10-12 06:32:45] -rw------- 1 boinc boinc       637 Okt 12 06:32 FHYLDm2IpR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2agNDmRMVfzn.diag
[2025-10-12 06:32:45] -rw-r--r-- 1 boinc boinc     21638 Okt 12 06:32 stderr.txt
[2025-10-12 06:32:45] HITS file was successfully produced:
[2025-10-12 06:32:45] -rw------- 1 boinc boinc 196914476 Okt 12 06:31 shared/HITS.pool.root.1
[2025-10-12 06:32:45]  *** Contents of shared directory: ***
[2025-10-12 06:32:45] insgesamt 409912
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc 220543418 Okt 12 03:57 ATLAS.root_0
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc    569677 Okt 12 03:57 input.tar.gz
[2025-10-12 06:32:45] -rw-r--r-- 2 boinc boinc     15120 Okt 12 03:57 start_atlas.sh
[2025-10-12 06:32:45] -rw------- 1 boinc boinc 196914476 Okt 12 06:31 HITS.pool.root.1
[2025-10-12 06:32:45] -rw------- 1 boinc boinc   1689600 Okt 12 06:32 result.tar.gz
06:32:46 (3077565): run_atlas exited; CPU time 27804.261741
06:32:46 (3077565): called boinc_finish(0)

</stderr_txt>
]]>

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