Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 10:49:34 (15924): vboxwrapper version 26210
2025-10-12 10:49:34 (15924): BOINC client version: 8.0.2
2025-10-12 10:49:34 (15924): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 10:49:35 (15924): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 10:49:35 (15924): Create VM. (boinc_4c8bd7448e8a56c6, slot#0)
2025-10-12 10:49:35 (15924): Setting Memory Size for VM. (6000MB)
2025-10-12 10:49:36 (15924): Setting CPU Count for VM. (3)
2025-10-12 10:49:36 (15924): Setting Chipset Options for VM.
2025-10-12 10:49:36 (15924): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 10:49:36 (15924): Setting Boot Options for VM.
2025-10-12 10:49:37 (15924): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 10:49:37 (15924): Enabling VM Network Access.
2025-10-12 10:49:37 (15924): Disabling USB Support for VM.
2025-10-12 10:49:38 (15924): Disabling COM Port Support for VM.
2025-10-12 10:49:38 (15924): Disabling LPT Port Support for VM.
2025-10-12 10:49:38 (15924): Disabling Audio Support for VM.
2025-10-12 10:49:38 (15924): Disabling Clipboard Support for VM.
2025-10-12 10:49:39 (15924): Disabling Drag and Drop Support for VM.
2025-10-12 10:49:39 (15924): Adding storage controller(s) to VM.
2025-10-12 10:49:39 (15924): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 10:49:40 (15924): Adding VirtualBox Guest Additions to VM.
2025-10-12 10:49:40 (15924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 10:49:40 (15924): forwarding host port 57309 to guest port 80
2025-10-12 10:49:41 (15924): Enabling remote desktop for VM.
2025-10-12 10:49:41 (15924): Enabling shared directory for VM.
2025-10-12 10:49:42 (15924): Starting VM using VBoxManage interface. (boinc_4c8bd7448e8a56c6, slot#0)
2025-10-12 10:49:49 (15924): Successfully started VM. (PID = '4848')
2025-10-12 10:49:49 (15924): Reporting VM Process ID to BOINC.
2025-10-12 10:49:49 (15924): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 10:49:49 (15924): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 10:49:49 (15924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 10:49:49 (15924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 10:49:49 (15924): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 10:49:49 (15924): Detected: Web Application Enabled (http://localhost:57309)
2025-10-12 10:49:49 (15924): Detected: Remote Desktop Enabled (localhost:57310)
2025-10-12 10:49:49 (15924): Preference change detected
2025-10-12 10:49:49 (15924): Setting CPU throttle for VM. (100%)
2025-10-12 10:49:49 (15924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 10:49:51 (15924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 10:49:51 (15924): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 10:49:54 (15924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 10:49:54 (15924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 10:49:54 (15924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 10:49:58 (15924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 10:49:58 (15924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 10:50:05 (15924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000124 main     Log opened 2025-10-12T10:50:03.792569000Z
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000226 main     OS Product: Linux
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000258 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000284 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000307 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000308 main     Process ID: 1367
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.000308 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 10:50:05 (15924): Guest Log: 00:00:00.001226 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 10:50:05 (15924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 10:50:05 (15924): Guest Log: [INFO] Mounting shared directory
2025-10-12 10:50:05 (15924): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 10:50:09 (15924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 10:50:09 (15924): Guest Log: [INFO] Detected branch: prod
2025-10-12 10:50:09 (15924): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 10:50:09 (15924): Guest Log: Copying input files
2025-10-12 10:50:10 (15924): Guest Log: Copied input files into RunAtlas.
2025-10-12 10:50:10 (15924): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-12 10:50:15 (15924): Guest Log: 00:00:10.003721 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 119 564 000ns (GuestNow=1 760 259 014 676 274 000 ns GuestLast=1 760 266 203 795 838 000 ns fSetTimeLastLoop=true )
2025-10-12 10:50:17 (15924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 10:50:17 (15924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 10:50:17 (15924): Guest Log: 2.6.3.0 1641 0 29588 151613 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-12 10:50:18 (15924): Guest Log: copied the webapp to /var/www
2025-10-12 10:50:18 (15924): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-12 10:50:18 (15924): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-12 10:50:18 (15924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 10:50:18 (15924): Guest Log:  *** Starting ATLAS job. (PandaID=6838200061 taskID=46676269) ***
2025-10-12 12:29:52 (15924): Status Report: Elapsed Time: '6000.000000'
2025-10-12 12:29:52 (15924): Status Report: CPU Time: '16851.453125'
2025-10-12 14:09:55 (15924): Status Report: Elapsed Time: '12000.000000'
2025-10-12 14:09:55 (15924): Status Report: CPU Time: '34654.687500'
2025-10-12 15:49:58 (15924): Status Report: Elapsed Time: '18000.000000'
2025-10-12 15:49:58 (15924): Status Report: CPU Time: '52456.859375'
2025-10-12 16:33:41 (15924): Guest Log:  *** Job finished ***
2025-10-12 16:33:41 (15924): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:22,560 | INFO     | [job] validate thread has finished
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:22,610 | INFO     | [data] copytool_out thread has finished
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:25,172 | INFO     | [data] queue_monitor thread has finished
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:26,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281061869376)>', '<ExcThread(monitor, started 140280384702208)>']
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:27,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:27,290 | INFO     | [monitor] control thread has ended
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,624 | INFO     | all workflow threads have been joined
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,624 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,624 | INFO     | traces error code: 0
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,741 [wrapper] ==== pilot stdout END ====
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,746 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,750 [wrapper] pilotpid: 6004
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,755 [wrapper] Pilot exit status: 0
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,864 [wrapper] pandaids: 6838200061
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,896 [wrapper] cleanup supervisor_pilot 23919 6005
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,901 [wrapper] Test setup, not cleaning
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,907 [wrapper] apfmon messages muted
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,913 [wrapper] ==== wrapper stdout END ====
2025-10-12 16:33:41 (15924): Guest Log: 2025-10-12 14:33:31,918 [wrapper] ==== wrapper stderr END ====
2025-10-12 16:33:41 (15924): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 16:33:41 (15924): Guest Log:     "exeErrorCode": 0,
2025-10-12 16:33:41 (15924): Guest Log:     "exeErrorDiag": "",
2025-10-12 16:33:41 (15924): Guest Log:     "pilotErrorCode": 0,
2025-10-12 16:33:41 (15924): Guest Log:     "pilotErrorDiag": "",
2025-10-12 16:33:41 (15924): Guest Log:  *** Listing of results directory ***
2025-10-12 16:33:41 (15924): Guest Log: total 198640
2025-10-12 16:33:41 (15924): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 07:43 pilot3.tar.gz
2025-10-12 16:33:41 (15924): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 07:48 queuedata.json
2025-10-12 16:33:41 (15924): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 07:49 runpilot2-wrapper.sh
2025-10-12 16:33:41 (15924): Guest Log: -rwxr-xr-x. 1 atlas atlas      9023 Oct 12 08:50 init_data.xml
2025-10-12 16:33:41 (15924): Guest Log: -rwxr-xr-x. 1 atlas atlas    569682 Oct 12 08:50 input.tar.gz
2025-10-12 16:33:41 (15924): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 08:50 start_atlas.sh
2025-10-12 16:33:41 (15924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 08:50 EVNT.46676267._002159.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 16:33:41 (15924): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 08:50 pandaJob.out
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas    975520 Oct 12 08:50 agis_schedconf.cvmfs.json
2025-10-12 16:33:41 (15924): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 08:50 pilot3
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas 193034064 Oct 12 14:32 HITS.46676269._053812.pool.root.1
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas      1041 Oct 12 14:33 memory_monitor_summary.json
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 14:33 agis_ddmendpoints.agis.ALL.json
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas    482888 Oct 12 14:33 log.46676269._053812.job.log.tgz.1
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 14:33 pilot_heartbeat.json
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas      7780 Oct 12 14:33 heartbeat.json
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 12 14:33 pilotlog.txt
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas   2787491 Oct 12 14:33 log.46676269._053812.job.log.1
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 14:33 output.list
2025-10-12 16:33:41 (15924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 14:33 runtime_log
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas   3287040 Oct 12 14:33 result.tar.gz
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas       657 Oct 12 14:33 vYYMDmPXjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJofNDm8WJrrn.diag
2025-10-12 16:33:41 (15924): Guest Log: -rw-r--r--. 1 atlas atlas      8627 Oct 12 14:33 runtime_log.err
2025-10-12 16:33:41 (15924): Guest Log: Looking for outputfile HITS.46676269._053812.pool.root.1
2025-10-12 16:33:41 (15924): Guest Log: HITS file was successfully produced
2025-10-12 16:33:41 (15924): Guest Log: -rw-------. 1 atlas atlas 193034064 Oct 12 14:32 /home/atlas/RunAtlas/HITS.46676269._053812.pool.root.1
2025-10-12 16:33:42 (15924): Guest Log: Successfully finished the ATLAS job!
2025-10-12 16:33:42 (15924): Guest Log: Copying the results back to the shared directory!
2025-10-12 16:33:42 (15924): Guest Log:  *** Contents of shared directory: ***
2025-10-12 16:33:42 (15924): Guest Log: total 408492
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root 221364936 Oct 12 08:49 ATLAS.root_0
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root 193034064 Oct 12  2025 HITS.pool.root.1
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root      9023 Oct 12 08:49 init_data.xml
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root    569682 Oct 11 15:52 input.tar.gz
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root   3287040 Oct 12  2025 result.tar.gz
2025-10-12 16:33:42 (15924): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 15:52 start_atlas.sh
2025-10-12 16:33:42 (15924): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 16:33:42 (15924): VM Completion File Detected.
2025-10-12 16:33:42 (15924): Powering off VM.
2025-10-12 16:33:43 (15924): Successfully stopped VM.
2025-10-12 16:33:43 (15924): Deregistering VM. (boinc_4c8bd7448e8a56c6, slot#0)
2025-10-12 16:33:43 (15924): Removing network bandwidth throttle group from VM.
2025-10-12 16:33:43 (15924): Removing VM from VirtualBox.
2025-10-12 16:33:48 (15924): called boinc_finish(0)

</stderr_txt>
]]>

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