Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:23 (868392): wrapper (7.7.26015): starting
12:42:23 (868392): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 12:42:23] Arguments: --nthreads 8
[2025-10-11 12:42:23] Threads: 8
[2025-10-11 12:42:23] Checking for CVMFS
[2025-10-11 12:42:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:42:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:42:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:42:25] 2.13.2.0 953388 85123 378184 151590 3 569 28125274 32935936 40964 16776704 0 450737267 99.715 320338582 16667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 12:42:25] CVMFS is ok
[2025-10-11 12:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:42:25] Further information can be found at the LHC@home message board.
[2025-10-11 12:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:42:25] Checking for apptainer binary...
[2025-10-11 12:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:42:25] Running /usr/bin/apptainer --version
[2025-10-11 12:42:25] apptainer version 1.4.3-1.el9
[2025-10-11 12:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:42:26] c7-2-10.aglt2.org
[2025-10-11 12:42:26] apptainer works
[2025-10-11 12:42:26] Set ATHENA_PROC_NUMBER=8
[2025-10-11 12:42:26] Set ATHENA_CORE_NUMBER=8
[2025-10-11 12:42:26] Starting ATLAS job with PandaID=6838294500
[2025-10-11 12:42:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:03:22]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:03:22] 2025-10-11 20:02:26,479 | INFO     | time since job start (11974s) is within the limit (172800.0s)
[2025-10-11 16:03:22] 2025-10-11 20:02:27,056 | INFO     | monitor loop #667: job 0:6838294500 is in state 'finished'
[2025-10-11 16:03:22] 2025-10-11 20:02:27,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,099 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 16:03:22] 2025-10-11 20:02:28,111 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3127.229406250001
[2025-10-11 16:03:22] 2025-10-11 20:02:28,125 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838294500/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,126 | INFO     | extracted standard info from prmon json
[2025-10-11 16:03:22] 2025-10-11 20:02:28,126 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 16:03:22] 2025-10-11 20:02:28,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 16:03:22] 2025-10-11 20:02:28,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:03:22] 2025-10-11 20:02:28,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:03:22] 2025-10-11 20:02:28,136 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:03:22] 2025-10-11 20:02:28,137 | INFO     | sum of square deviations: 2334801243.9999876
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | sum of deviations: 50157382372.28575
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | mean x: 1760206965.7142856
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | mean y: 2273548.0051020407
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | -- intersect: -37811383636.1234
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | intersect: -37811383636.1234
[2025-10-11 16:03:22] 2025-10-11 20:02:28,138 | INFO     | chi2: 3.1726164053541677
[2025-10-11 16:03:22] 2025-10-11 20:02:28,139 | INFO     | sum of square deviations: 2160640936.1989427
[2025-10-11 16:03:22] 2025-10-11 20:02:28,144 | INFO     | sum of deviations: 59518648433.61258
[2025-10-11 16:03:22] 2025-10-11 20:02:28,144 | INFO     | mean x: 1760206813.2146597
[2025-10-11 16:03:22] 2025-10-11 20:02:28,144 | INFO     | mean y: 2281536.42408377
[2025-10-11 16:03:22] 2025-10-11 20:02:28,144 | INFO     | -- intersect: -48485705861.64795
[2025-10-11 16:03:22] 2025-10-11 20:02:28,144 | INFO     | intersect: -48485705861.64795
[2025-10-11 16:03:22] 2025-10-11 20:02:28,145 | INFO     | chi2: 2.5042031700894807
[2025-10-11 16:03:22] 2025-10-11 20:02:28,145 | INFO     | current chi2=2.5042031700894807 (change=21.068202072480624 %)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,145 | INFO     | right removable region: 190
[2025-10-11 16:03:22] 2025-10-11 20:02:28,145 | INFO     | sum of square deviations: 2160627028.7643914
[2025-10-11 16:03:22] 2025-10-11 20:02:28,146 | INFO     | sum of deviations: 9270616260.434557
[2025-10-11 16:03:22] 2025-10-11 20:02:28,146 | INFO     | mean x: 1760207118.2198954
[2025-10-11 16:03:22] 2025-10-11 20:02:28,156 | INFO     | mean y: 2309155.727748691
[2025-10-11 16:03:22] 2025-10-11 20:02:28,156 | INFO     | -- intersect: -7550222824.414141
[2025-10-11 16:03:22] 2025-10-11 20:02:28,157 | INFO     | intersect: -7550222824.414141
[2025-10-11 16:03:22] 2025-10-11 20:02:28,157 | INFO     | chi2: 1.0376835709642118
[2025-10-11 16:03:22] 2025-10-11 20:02:28,157 | INFO     | current chi2=1.0376835709642118 (change=67.2924981030484 %)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,157 | INFO     | sum of square deviations: 1995348229.4623697
[2025-10-11 16:03:22] 2025-10-11 20:02:28,158 | INFO     | sum of deviations: -3358397497.333335
[2025-10-11 16:03:22] 2025-10-11 20:02:28,158 | INFO     | mean x: 1760207270.7204301
[2025-10-11 16:03:22] 2025-10-11 20:02:28,158 | INFO     | mean y: 2320750.6666666665
[2025-10-11 16:03:22] 2025-10-11 20:02:28,158 | INFO     | -- intersect: 2964949331.2268786
[2025-10-11 16:03:22] 2025-10-11 20:02:28,158 | INFO     | intersect: 2964949331.2268786
[2025-10-11 16:03:22] 2025-10-11 20:02:28,159 | INFO     | chi2: 0.8476350906814011
[2025-10-11 16:03:22] 2025-10-11 20:02:28,159 | INFO     | current chi2=0.8476350906814011 (change=18.314685285632727 %)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,159 | INFO     | left removable region: 20
[2025-10-11 16:03:22] 2025-10-11 20:02:28,159 | INFO     | sum of square deviations: 1523451556.005885
[2025-10-11 16:03:22] 2025-10-11 20:02:28,160 | INFO     | sum of deviations: 2800490209.5235305
[2025-10-11 16:03:22] 2025-10-11 20:02:28,160 | INFO     | mean x: 1760207392.7235293
[2025-10-11 16:03:22] 2025-10-11 20:02:28,160 | INFO     | mean y: 2334083.394117647
[2025-10-11 16:03:22] 2025-10-11 20:02:28,160 | INFO     | -- intersect: -3233373380.1086745
[2025-10-11 16:03:22] 2025-10-11 20:02:28,160 | INFO     | intersect: -3233373380.1086745
[2025-10-11 16:03:22] 2025-10-11 20:02:28,166 | INFO     | chi2: 0.07900577524398887
[2025-10-11 16:03:22] 2025-10-11 20:02:28,166 | INFO     | -- intersect: -3233373380.1086745
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | current memory leak: 1.84 B/s (using 170 data points, chi2=0.08)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | could have reported an average CPU frequency of 3137 MHz (10 samples)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | ..............................
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | . Timing measurements:
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | . get job = 0 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,167 | INFO     | . initial setup = 3 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | . payload setup = 15 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | . stage-in = 0 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | . payload execution = 11917 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | . stage-out = 3 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | . log creation = 0 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,168 | INFO     | ..............................
[2025-10-11 16:03:22] 2025-10-11 20:02:28,379 | INFO     | 
[2025-10-11 16:03:22] 2025-10-11 20:02:28,380 | INFO     | job summary report
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | --------------------------------------------------
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | PanDA job id: 6838294500
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | task id: 46676269
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | errors: (none)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | pilot state: finished 
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | transexitcode: 0
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | exeerrorcode: 0
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | exeerrordiag: 
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | exitcode: 0
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | exitmsg: OK
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | cpuconsumptiontime: 34323 s
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | nevents: 400
[2025-10-11 16:03:22] 2025-10-11 20:02:28,381 | INFO     | neventsw: 0
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | pid: 883415
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | pgrp: 883415
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | corecount: 8
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | event service: False
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | sizes: {0: 2348856, 10: 2349118, 11: 2349146, 11934: 2378468, 11938: 2387466, 11940: 2387522, 11953: 2387844}
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | --------------------------------------------------
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | 
[2025-10-11 16:03:22] 2025-10-11 20:02:28,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | job 6838294500 has completed (purged errors)
[2025-10-11 16:03:22] 2025-10-11 20:02:28,448 | INFO     | overall cleanup function is called
[2025-10-11 16:03:22] 2025-10-11 20:02:29,460 | INFO     | --- collectZombieJob: --- 10, [883415]
[2025-10-11 16:03:22] 2025-10-11 20:02:29,461 | INFO     | zombie collector waiting for pid 883415
[2025-10-11 16:03:22] 2025-10-11 20:02:29,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:03:22] 2025-10-11 20:02:29,461 | INFO     | collected zombie processes
[2025-10-11 16:03:22] 2025-10-11 20:02:29,461 | INFO     | will attempt to kill all subprocesses of pid=883415
[2025-10-11 16:03:22] 2025-10-11 20:02:31,385 | INFO     | process IDs to be killed: [883415] (in reverse order)
[2025-10-11 16:03:22] 2025-10-11 20:02:31,598 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:03:22] 2025-10-11 20:02:31,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:03:22] 2025-10-11 20:02:31,622 | INFO     | did not find any defunct processes belonging to 883415
[2025-10-11 16:03:22] 2025-10-11 20:02:31,645 | INFO     | did not find any defunct processes belonging to 883415
[2025-10-11 16:03:22] 2025-10-11 20:02:31,646 | INFO     | ready for new job
[2025-10-11 16:03:22] 2025-10-11 20:02:31,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:03:22] 2025-10-11 20:02:31,702 | INFO     | ***************************************
[2025-10-11 16:03:22] 2025-10-11 20:02:31,702 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:03:22] 2025-10-11 20:02:31,702 | INFO     | ***************************************
[2025-10-11 16:03:22] 2025-10-11 20:02:31,702 | INFO     | 
[2025-10-11 16:03:22] 2025-10-11 20:02:31,778 | INFO     | architecture information:
[2025-10-11 16:03:22] 2025-10-11 20:02:31,808 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:03:22] 2025-10-11 20:02:31,936 | INFO     | cat /etc/os-release:
[2025-10-11 16:03:22] NAME="CentOS Linux"
[2025-10-11 16:03:22] VERSION="7 (Core)"
[2025-10-11 16:03:22] ID="centos"
[2025-10-11 16:03:22] ID_LIKE="rhel fedora"
[2025-10-11 16:03:22] VERSION_ID="7"
[2025-10-11 16:03:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:03:22] ANSI_COLOR="0;31"
[2025-10-11 16:03:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:03:22] HOME_URL="https://www.centos.org/"
[2025-10-11 16:03:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:03:22] 
[2025-10-11 16:03:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:03:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:03:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:03:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:03:22] 
[2025-10-11 16:03:22] 2025-10-11 20:02:31,937 | INFO     | ***************************************
[2025-10-11 16:03:22] 2025-10-11 20:02:32,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 16:03:22] 2025-10-11 20:02:32,580 | INFO     | sufficient remaining disk space (74169974784 B)
[2025-10-11 16:03:22] 2025-10-11 20:02:32,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:03:22] 2025-10-11 20:02:32,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:03:22] 2025-10-11 20:02:32,580 | INFO     | update_server=False
[2025-10-11 16:03:22] 2025-10-11 20:02:32,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:03:22] 2025-10-11 20:02:32,709 | INFO     | all data control threads have been joined
[2025-10-11 16:03:22] 2025-10-11 20:02:32,816 | INFO     | all job control threads have been joined
[2025-10-11 16:03:22] 2025-10-11 20:02:33,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:03:22] 2025-10-11 20:02:33,085 | INFO     | aborting loop
[2025-10-11 16:03:22] 2025-10-11 20:02:33,114 | INFO     | all payload control threads have been joined
[2025-10-11 16:03:22] 2025-10-11 20:02:33,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:03:22] 2025-10-11 20:02:33,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:03:22] 2025-10-11 20:02:33,586 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:33,716 | INFO     | [data] control thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:33,823 | INFO     | [job] control thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:33,884 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:33,941 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:33,942 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,090 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,120 | INFO     | [payload] control thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,220 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,221 | INFO     | [job] validate thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:03:22] 2025-10-11 20:02:34,436 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,471 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,491 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:34,696 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:35,482 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:02:38,394 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:03:22] 2025-10-11 20:03:00,822 | INFO     | PID=873374 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 16:03:22] 2025-10-11 20:03:00,822 | INFO     | .. there are 45 such processes running
[2025-10-11 16:03:22] 2025-10-11 20:03:00,823 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:03:22] 2025-10-11 20:03:00,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:03:22] 2025-10-11 20:03:00,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:03:22] 2025-10-11 20:03:13,779 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:03:22] 2025-10-11 20:03:15,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750146438976)>', '<ExcThread(monitor, started 139749796845312)>']
[2025-10-11 16:03:22] 2025-10-11 20:03:15,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:03:22] 2025-10-11 20:03:15,943 | INFO     | [monitor] control thread has ended
[2025-10-11 16:03:22] 2025-10-11 20:03:20,911 | INFO     | all workflow threads have been joined
[2025-10-11 16:03:22] 2025-10-11 20:03:20,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:03:22] 2025-10-11 20:03:20,912 | INFO     | traces error code: 0
[2025-10-11 16:03:22] 2025-10-11 20:03:20,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:03:22] 2025-10-11 20:03:21,699 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:03:22] 2025-10-11 20:03:21,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:03:22] 2025-10-11 20:03:21,739 [wrapper] pilotpid: 873374
[2025-10-11 16:03:22] 2025-10-11 20:03:21,743 [wrapper] Pilot exit status: 0
[2025-10-11 16:03:22] 2025-10-11 20:03:21,762 [wrapper] pandaids: 6838294500
[2025-10-11 16:03:22] 2025-10-11 20:03:21,909 [wrapper] cleanup supervisor_pilot 1605023 873375
[2025-10-11 16:03:22] 2025-10-11 20:03:21,920 [wrapper] Test setup, not cleaning
[2025-10-11 16:03:22] 2025-10-11 20:03:21,934 [wrapper] apfmon messages muted
[2025-10-11 16:03:22] 2025-10-11 20:03:21,938 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:03:22] 2025-10-11 20:03:21,940 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:03:22]  *** Error codes and diagnostics ***
[2025-10-11 16:03:22]     "exeErrorCode": 0,
[2025-10-11 16:03:22]     "exeErrorDiag": "",
[2025-10-11 16:03:22]     "pilotErrorCode": 0,
[2025-10-11 16:03:22]     "pilotErrorDiag": "",
[2025-10-11 16:03:22]  *** Listing of results directory ***
[2025-10-11 16:03:22] total 418592
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:50 pilot3.tar.gz
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:54 queuedata.json
[2025-10-11 16:03:22] -rwx------. 1 boincer umatlas     36292 Oct 11 05:55 runpilot2-wrapper.sh
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas       100 Oct 11 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:03:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 12:42 run_atlas
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas       105 Oct 11 12:42 job.xml
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas 221961584 Oct 11 12:42 EVNT.46676267._002226.pool.root.1
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:42 start_atlas.sh
[2025-10-11 16:03:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 12:42 shared
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:42 input.tar.gz
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas         0 Oct 11 12:42 boinc_lockfile
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 12:42 pandaJob.out
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas    975512 Oct 11 12:42 agis_schedconf.cvmfs.json
[2025-10-11 16:03:22] drwx------. 5 boincer umatlas      4096 Oct 11 12:42 pilot3
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas      6935 Oct 11 16:01 init_data.xml
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas 199042189 Oct 11 16:01 HITS.46676269._055496.pool.root.1
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas       530 Oct 11 16:01 boinc_task_state.xml
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas      1046 Oct 11 16:02 memory_monitor_summary.json
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas    426351 Oct 11 16:02 log.46676269._055496.job.log.tgz.1
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas      7804 Oct 11 16:02 heartbeat.json
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas        95 Oct 11 16:03 pilot_heartbeat.json
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas      4823 Oct 11 16:03 pilotlog.txt
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 16:03 boinc_mmap_file
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas        28 Oct 11 16:03 wrapper_checkpoint.txt
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas   1434079 Oct 11 16:03 log.46676269._055496.job.log.1
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas       357 Oct 11 16:03 output.list
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas       620 Oct 11 16:03 runtime_log
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas   1884160 Oct 11 16:03 result.tar.gz
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas       659 Oct 11 16:03 zVLKDmrUlR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzdRMDmigzsHm.diag
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 16:03 runtime_log.err
[2025-10-11 16:03:22] -rw-r--r--. 1 boincer umatlas     21189 Oct 11 16:03 stderr.txt
[2025-10-11 16:03:22] HITS file was successfully produced:
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas 199042189 Oct 11 16:01 shared/HITS.pool.root.1
[2025-10-11 16:03:22]  *** Contents of shared directory: ***
[2025-10-11 16:03:22] total 413564
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas 221961584 Oct 11 12:42 ATLAS.root_0
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:42 start_atlas.sh
[2025-10-11 16:03:22] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:42 input.tar.gz
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas 199042189 Oct 11 16:01 HITS.pool.root.1
[2025-10-11 16:03:22] -rw-------. 1 boincer umatlas   1884160 Oct 11 16:03 result.tar.gz
16:03:23 (868392): run_atlas exited; CPU time 34782.894764
16:03:23 (868392): called boinc_finish(0)

</stderr_txt>
]]>

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