Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:29 (2850183): wrapper (7.7.26015): starting
09:11:29 (2850183): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 09:11:29] Arguments: --nthreads 12
[2025-10-11 09:11:29] Threads: 12
[2025-10-11 09:11:29] Checking for CVMFS
[2025-10-11 09:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:11:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:11:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:11:31] 2.11.5.0 2869 30238 235696 151589 0 859 26786718 45568001 25092 130560 0 274891407 99.845 121904119 25840 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 09:11:31] CVMFS is ok
[2025-10-11 09:11:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:11:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:11:31] Further information can be found at the LHC@home message board.
[2025-10-11 09:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:11:31] Checking for apptainer binary...
[2025-10-11 09:11:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:11:31] Running /usr/bin/apptainer --version
[2025-10-11 09:11:31] apptainer version 1.4.1-1.el9
[2025-10-11 09:11:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:11:32] wns0048.triumf.lcg
[2025-10-11 09:11:32] apptainer works
[2025-10-11 09:11:32] Set ATHENA_PROC_NUMBER=12
[2025-10-11 09:11:32] Set ATHENA_CORE_NUMBER=12
[2025-10-11 09:11:32] Starting ATLAS job with PandaID=6838452307
[2025-10-11 09:11:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:17:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | WARNING  | wrong length of table data, x=[1760199202.0], y=[1944.0] (must be same and length>=4)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . Timing measurements:
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . get job = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . initial setup = 3 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload setup = 19 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . stage-in = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload execution = 66 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . stage-out = 2 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . log creation = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838452307/pilotlog.txt
[2025-10-11 09:17:11] 2025-10-11 16:16:32,573 | INFO     | time since job start (268s) is within the limit (172800.0s)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,624 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 09:17:11] - Log from pilotlog.txt -
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | INFO     | extracted standard info from prmon json
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | WARNING  | wrong length of table data, x=[1760199202.0], y=[1944.0] (must be same and length>=4)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . Timing measurements:
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . get job = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . initial setup = 3 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload setup = 19 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . stage-in = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload execution = 66 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . stage-out = 2 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . log creation = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838452307/pilotlog.txt
[2025-10-11 09:17:11] 2025-10-11 16:16:32,573 | INFO     | time since job start (268s) is within the limit (172800.0s)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,625 | WARNING  | 
[2025-10-11 09:17:11] [begin log extracts]
[2025-10-11 09:17:11] - Log from pilotlog.txt -
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | INFO     | extracted standard info from prmon json
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:17:11] 2025-10-11 16:16:32,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | WARNING  | wrong length of table data, x=[1760199202.0], y=[1944.0] (must be same and length>=4)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . Timing measurements:
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . get job = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . initial setup = 3 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload setup = 19 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . stage-in = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,548 | INFO     | . payload execution = 66 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . stage-out = 2 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | . log creation = 0 s
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | ..............................
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 09:17:11] 2025-10-11 16:16:32,549 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838452307/pilotlog.txt
[2025-10-11 09:17:11] 2025-10-11 16:16:32,573 | INFO     | time since job start (268s) is within the limit (172800.0s)
[2025-10-11 09:17:11] [end log extracts]
[2025-10-11 09:17:11] 2025-10-11 16:16:32,625 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 09:17:11] 2025-10-11 16:16:32,626 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 09:17:11] 2025-10-11 16:16:33,175 | INFO     | 
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | job summary report
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | --------------------------------------------------
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | PanDA job id: 6838452307
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | task id: 46676269
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 09:14:02,481 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | pilot state: failed 
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | transexitcode: 65
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | exeerrorcode: 65
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | exitcode: 65
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | nevents: 0
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | neventsw: 0
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | pid: 2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:33,176 | INFO     | pgrp: 2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | corecount: 12
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | event service: False
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | sizes: {0: 2348683, 1: 2348882, 12: 2348882, 17: 2349172, 22: 2349200, 90: 2372698, 94: 2376990, 96: 2377018, 231: 2377184}
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | --------------------------------------------------
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | 
[2025-10-11 09:17:11] 2025-10-11 16:16:33,177 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:17:11] 2025-10-11 16:16:33,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:17:11] 2025-10-11 16:16:33,333 | INFO     | job 6838452307 has completed (purged errors)
[2025-10-11 09:17:11] 2025-10-11 16:16:33,333 | INFO     | overall cleanup function is called
[2025-10-11 09:17:11] 2025-10-11 16:16:34,344 | INFO     | --- collectZombieJob: --- 10, [2868737]
[2025-10-11 09:17:11] 2025-10-11 16:16:34,344 | INFO     | zombie collector waiting for pid 2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:34,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:17:11] 2025-10-11 16:16:34,345 | INFO     | collected zombie processes
[2025-10-11 09:17:11] 2025-10-11 16:16:34,345 | INFO     | will attempt to kill all subprocesses of pid=2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:34,717 | INFO     | process IDs to be killed: [2868737] (in reverse order)
[2025-10-11 09:17:11] 2025-10-11 16:16:34,805 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:17:11] 2025-10-11 16:16:34,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:17:11] 2025-10-11 16:16:34,814 | INFO     | did not find any defunct processes belonging to 2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:34,824 | INFO     | did not find any defunct processes belonging to 2868737
[2025-10-11 09:17:11] 2025-10-11 16:16:34,825 | INFO     | ready for new job
[2025-10-11 09:17:11] 2025-10-11 16:16:34,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:17:11] 2025-10-11 16:16:34,866 | INFO     | ***************************************
[2025-10-11 09:17:11] 2025-10-11 16:16:34,867 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:17:11] 2025-10-11 16:16:34,867 | INFO     | ***************************************
[2025-10-11 09:17:11] 2025-10-11 16:16:34,867 | INFO     | 
[2025-10-11 09:17:11] 2025-10-11 16:16:34,869 | INFO     | architecture information:
[2025-10-11 09:17:11] 2025-10-11 16:16:34,869 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:17:11] 2025-10-11 16:16:34,981 | INFO     | cat /etc/os-release:
[2025-10-11 09:17:11] NAME="CentOS Linux"
[2025-10-11 09:17:11] VERSION="7 (Core)"
[2025-10-11 09:17:11] ID="centos"
[2025-10-11 09:17:11] ID_LIKE="rhel fedora"
[2025-10-11 09:17:11] VERSION_ID="7"
[2025-10-11 09:17:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:17:11] ANSI_COLOR="0;31"
[2025-10-11 09:17:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:17:11] HOME_URL="https://www.centos.org/"
[2025-10-11 09:17:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:17:11] 
[2025-10-11 09:17:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:17:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:17:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:17:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:17:11] 
[2025-10-11 09:17:11] 2025-10-11 16:16:34,982 | INFO     | ***************************************
[2025-10-11 09:17:11] 2025-10-11 16:16:35,491 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | INFO     | sufficient remaining disk space (1843163824128 B)
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | INFO     | update_server=False
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:17:11] 2025-10-11 16:16:35,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:17:11] 2025-10-11 16:16:35,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:17:11] 2025-10-11 16:16:35,580 | INFO     | aborting loop
[2025-10-11 09:17:11] 2025-10-11 16:16:35,850 | INFO     | all data control threads have been joined
[2025-10-11 09:17:11] 2025-10-11 16:16:36,076 | INFO     | all payload control threads have been joined
[2025-10-11 09:17:11] 2025-10-11 16:16:36,403 | INFO     | all job control threads have been joined
[2025-10-11 09:17:11] 2025-10-11 16:16:36,585 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:36,585 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:36,860 | INFO     | [data] control thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:36,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:17:11] 2025-10-11 16:16:37,082 | INFO     | [payload] control thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,235 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,240 | INFO     | [job] validate thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,249 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,342 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,409 | INFO     | [job] control thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,895 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:37,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:17:11] 2025-10-11 16:16:37,921 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:38,161 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:38,876 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:38,908 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:16:39,588 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:17:11] 2025-10-11 16:17:04,227 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:17:11] 2025-10-11 16:17:05,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780939470656)>', '<ExcThread(monitor, started 139780549490432)>']
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | INFO     | PID=2855094 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | INFO     | .. there are 35 such processes running
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:17:11] 2025-10-11 16:17:06,053 | INFO     | [monitor] control thread has ended
[2025-10-11 09:17:11] 2025-10-11 16:17:10,572 | INFO     | all workflow threads have been joined
[2025-10-11 09:17:11] 2025-10-11 16:17:10,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:17:11] 2025-10-11 16:17:10,573 | INFO     | traces error code: 0
[2025-10-11 09:17:11] 2025-10-11 16:17:10,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:17:11] 2025-10-11 16:17:10,704 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:17:11] 2025-10-11 16:17:10,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:17:11] 2025-10-11 16:17:10,708 [wrapper] pilotpid: 2855094
[2025-10-11 09:17:11] 2025-10-11 16:17:10,710 [wrapper] Pilot exit status: 0
[2025-10-11 09:17:11] 2025-10-11 16:17:10,724 [wrapper] pandaids: 6838452307
[2025-10-11 09:17:11] 2025-10-11 16:17:10,812 [wrapper] cleanup supervisor_pilot 2855105 2855095
[2025-10-11 09:17:11] 2025-10-11 16:17:10,814 [wrapper] Test setup, not cleaning
[2025-10-11 09:17:11] 2025-10-11 16:17:10,837 [wrapper] apfmon messages muted
[2025-10-11 09:17:11] 2025-10-11 16:17:10,875 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:17:11] 2025-10-11 16:17:10,881 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:17:11]  *** Error codes and diagnostics ***
[2025-10-11 09:17:11]     "exeErrorCode": 65,
[2025-10-11 09:17:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 09:17:11]     "pilotErrorCode": 1305,
[2025-10-11 09:17:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 09:17:11]  *** Listing of results directory ***
[2025-10-11 09:17:11] total 220364
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc    557409 Oct 11 05:51 pilot3.tar.gz
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc      5112 Oct 11 06:33 queuedata.json
[2025-10-11 09:17:11] -rwx------. 1 boinc boinc     36292 Oct 11 06:33 runpilot2-wrapper.sh
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc       100 Oct 11 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:17:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 09:11 run_atlas
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc       105 Oct 11 09:11 job.xml
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc      6594 Oct 11 09:11 init_data.xml
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc 221511831 Oct 11 09:11 EVNT.46676267._002339.pool.root.1
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc     15120 Oct 11 09:11 start_atlas.sh
[2025-10-11 09:17:11] drwxrwx--x. 2 boinc boinc      4096 Oct 11 09:11 shared
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc    569678 Oct 11 09:11 input.tar.gz
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc         0 Oct 11 09:11 boinc_lockfile
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc      2550 Oct 11 09:11 pandaJob.out
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc    975512 Oct 11 09:12 agis_schedconf.cvmfs.json
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc   1560580 Oct 11 09:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:17:11] drwx------. 5 boinc boinc      4096 Oct 11 09:12 pilot3
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc       524 Oct 11 09:14 boinc_task_state.xml
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc       965 Oct 11 09:14 memory_monitor_summary.json
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc     22546 Oct 11 09:14 log.46676269._058335.job.log.tgz.1
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc        95 Oct 11 09:16 pilot_heartbeat.json
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc      8399 Oct 11 09:16 heartbeat.json
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc      8192 Oct 11 09:17 boinc_mmap_file
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc      4823 Oct 11 09:17 pilotlog.txt
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc     94681 Oct 11 09:17 log.46676269._058335.job.log.1
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc       188 Oct 11 09:17 output.list
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc       620 Oct 11 09:17 runtime_log
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc    133120 Oct 11 09:17 result.tar.gz
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc       644 Oct 11 09:17 yRfLDm3toR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfxRMDmvfXyMo.diag
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc      8528 Oct 11 09:17 runtime_log.err
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc        23 Oct 11 09:17 wrapper_checkpoint.txt
[2025-10-11 09:17:11] -rw-r--r--. 1 boinc boinc     21287 Oct 11 09:17 stderr.txt
[2025-10-11 09:17:11] No HITS result produced
[2025-10-11 09:17:11]  *** Contents of shared directory: ***
[2025-10-11 09:17:11] total 217036
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc 221511831 Oct 11 09:11 ATLAS.root_0
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc     15120 Oct 11 09:11 start_atlas.sh
[2025-10-11 09:17:11] -rw-r--r--. 2 boinc boinc    569678 Oct 11 09:11 input.tar.gz
[2025-10-11 09:17:11] -rw-------. 1 boinc boinc    133120 Oct 11 09:17 result.tar.gz
09:17:13 (2850183): run_atlas exited; CPU time 29.593422
09:17:13 (2850183): called boinc_finish(0)

</stderr_txt>
]]>

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