Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:48:54 (2317214): wrapper (7.7.26015): starting
12:48:54 (2317214): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 12:48:54] Arguments: --nthreads 11
[2025-10-11 12:48:54] Threads: 11
[2025-10-11 12:48:54] Checking for CVMFS
[2025-10-11 12:48:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:48:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:48:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:48:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:48:55] 2.13.2.0 2216807 128063 424808 151590 2 188 33859440 40960000 2039 16776704 30 257488585 99.717 199426087 21780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 12:48:55] CVMFS is ok
[2025-10-11 12:48:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:48:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:48:55] Further information can be found at the LHC@home message board.
[2025-10-11 12:48:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:48:55] Checking for apptainer binary...
[2025-10-11 12:48:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:48:55] Running /usr/bin/apptainer --version
[2025-10-11 12:48:55] apptainer version 1.4.3-1.el9
[2025-10-11 12:48:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:48:55] c7-11-11.aglt2.org
[2025-10-11 12:48:55] apptainer works
[2025-10-11 12:48:55] Set ATHENA_PROC_NUMBER=11
[2025-10-11 12:48:55] Set ATHENA_CORE_NUMBER=11
[2025-10-11 12:48:55] Starting ATLAS job with PandaID=6838117517
[2025-10-11 12:48:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:33:25]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:33:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6838117517/log.46676269._052110.job.log.tgz.1
[2025-10-11 13:33:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/2a/log.46676269._052110.job.log.tgz.1
[2025-10-11 13:33:25]  workdir=None
[2025-10-11 13:33:25] ]
[2025-10-11 13:33:25] 2025-10-11 17:32:44,076 | INFO     | time since job start (2620s) is within the limit (172800.0s)
[2025-10-11 13:33:25] 2025-10-11 17:32:44,087 | INFO     | transferring file log.46676269._052110.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6838117517/log.46676269._052110.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 13:33:25] 2025-10-11 17:32:44,087 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6838117517/log.46676269._052110.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._052110.job
[2025-10-11 13:33:25] 2025-10-11 17:32:44,102 | INFO     | adding to output.list: log.46676269._052110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/2a/log.46676269._052110.job.log.tg
[2025-10-11 13:33:25] 2025-10-11 17:32:44,103 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 13:33:25] 2025-10-11 17:32:44,103 | INFO     | summary of transferred files:
[2025-10-11 13:33:25] 2025-10-11 17:32:44,103 | INFO     |  -- lfn=log.46676269._052110.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 13:33:25] 2025-10-11 17:32:44,103 | INFO     | stage-out finished correctly
[2025-10-11 13:33:25] 2025-10-11 17:32:44,154 | INFO     | monitor loop #198: job 0:6838117517 is in state 'finished'
[2025-10-11 13:33:25] 2025-10-11 17:32:44,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:33:25] 2025-10-11 17:32:45,311 | INFO     | PID=2321001 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:33:25] 2025-10-11 17:32:45,312 | INFO     | .. there are 5 such processes running
[2025-10-11 13:33:25] 2025-10-11 17:32:46,312 | INFO     | time since job start (2622s) is within the limit (172800.0s)
[2025-10-11 13:33:25] 2025-10-11 17:32:46,657 | INFO     | monitor loop #199: job 0:6838117517 is in state 'finished'
[2025-10-11 13:33:25] 2025-10-11 17:32:46,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:33:25] 2025-10-11 17:32:47,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 13:33:25] 2025-10-11 17:32:48,316 | INFO     | time since job start (2624s) is within the limit (172800.0s)
[2025-10-11 13:33:25] 2025-10-11 17:32:49,160 | INFO     | monitor loop #200: job 0:6838117517 is in state 'finished'
[2025-10-11 13:33:25] 2025-10-11 17:32:49,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:33:25] 2025-10-11 17:32:50,322 | INFO     | time since job start (2626s) is within the limit (172800.0s)
[2025-10-11 13:33:25] 2025-10-11 17:32:50,518 | INFO     | job 6838117517 has state=finished
[2025-10-11 13:33:25] 2025-10-11 17:32:50,518 | INFO     | preparing for final server update for job 6838117517 in state='finished'
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | this job has now completed (state=finished)
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | log transfer has been attempted: DONE
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | job 6838117517 has finished - writing final server update
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | total number of processed events: 400 (read)
[2025-10-11 13:33:25] 2025-10-11 17:32:50,519 | INFO     | executing command: lscpu
[2025-10-11 13:33:25] 2025-10-11 17:32:50,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 13:33:25] 2025-10-11 17:32:51,663 | INFO     | monitor loop #201: job 0:6838117517 is in state 'finished'
[2025-10-11 13:33:25] 2025-10-11 17:32:51,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:33:25] 2025-10-11 17:32:52,327 | INFO     | time since job start (2628s) is within the limit (172800.0s)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,376 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 13:33:25] 2025-10-11 17:32:53,391 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3059.924031249999
[2025-10-11 13:33:25] 2025-10-11 17:32:53,398 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838117517/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,399 | INFO     | extracted standard info from prmon json
[2025-10-11 13:33:25] 2025-10-11 17:32:53,399 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:33:25] 2025-10-11 17:32:53,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:33:25] 2025-10-11 17:32:53,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:33:25] 2025-10-11 17:32:53,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | sum of square deviations: 14456085.0
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | sum of deviations: -690877368.5
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | mean x: 1760202738.5
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | mean y: 2375434.6944444445
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | -- intersect: 84125029389.85406
[2025-10-11 13:33:25] 2025-10-11 17:32:53,400 | INFO     | intersect: 84125029389.85406
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | chi2: 0.006637608585871669
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | -- intersect: 84125029389.85406
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | current memory leak: -47.79 B/s (using 36 data points, chi2=0.01)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | could have reported an average CPU frequency of 3107 MHz (5 samples)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | ..............................
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . Timing measurements:
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . get job = 0 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . initial setup = 2 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . payload setup = 4 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . stage-in = 0 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . payload execution = 2596 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . stage-out = 0 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | . log creation = 0 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,401 | INFO     | ..............................
[2025-10-11 13:33:25] 2025-10-11 17:32:53,455 | INFO     | 
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | job summary report
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | --------------------------------------------------
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | PanDA job id: 6838117517
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | task id: 46676269
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | errors: (none)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | pilot state: finished 
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | transexitcode: 0
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | exeerrorcode: 0
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | exeerrordiag: 
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | exitcode: 0
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | exitmsg: OK
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | cpuconsumptiontime: 25588 s
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | nevents: 400
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | neventsw: 0
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | pid: 2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | pgrp: 2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | corecount: 11
[2025-10-11 13:33:25] 2025-10-11 17:32:53,456 | INFO     | event service: False
[2025-10-11 13:33:25] 2025-10-11 17:32:53,457 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 2604: 2374390, 2605: 2374389, 2606: 2383443, 2610: 2383627, 2615: 2383853}
[2025-10-11 13:33:25] 2025-10-11 17:32:53,457 | INFO     | --------------------------------------------------
[2025-10-11 13:33:25] 2025-10-11 17:32:53,457 | INFO     | 
[2025-10-11 13:33:25] 2025-10-11 17:32:53,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 13:33:25] 2025-10-11 17:32:53,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | job 6838117517 has completed (purged errors)
[2025-10-11 13:33:25] 2025-10-11 17:32:53,473 | INFO     | overall cleanup function is called
[2025-10-11 13:33:25] 2025-10-11 17:32:54,481 | INFO     | --- collectZombieJob: --- 10, [2329936]
[2025-10-11 13:33:25] 2025-10-11 17:32:54,481 | INFO     | zombie collector waiting for pid 2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:54,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:33:25] 2025-10-11 17:32:54,481 | INFO     | collected zombie processes
[2025-10-11 13:33:25] 2025-10-11 17:32:54,482 | INFO     | will attempt to kill all subprocesses of pid=2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:54,657 | INFO     | process IDs to be killed: [2329936] (in reverse order)
[2025-10-11 13:33:25] 2025-10-11 17:32:54,727 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:33:25] 2025-10-11 17:32:54,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:33:25] 2025-10-11 17:32:54,735 | INFO     | did not find any defunct processes belonging to 2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:54,741 | INFO     | did not find any defunct processes belonging to 2329936
[2025-10-11 13:33:25] 2025-10-11 17:32:54,741 | INFO     | ready for new job
[2025-10-11 13:33:25] 2025-10-11 17:32:54,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:33:25] 2025-10-11 17:32:54,742 | INFO     | ***************************************
[2025-10-11 13:33:25] 2025-10-11 17:32:54,742 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:33:25] 2025-10-11 17:32:54,742 | INFO     | ***************************************
[2025-10-11 13:33:25] 2025-10-11 17:32:54,742 | INFO     | 
[2025-10-11 13:33:25] 2025-10-11 17:32:54,757 | INFO     | architecture information:
[2025-10-11 13:33:25] 2025-10-11 17:32:54,757 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:33:25] 2025-10-11 17:32:54,769 | INFO     | cat /etc/os-release:
[2025-10-11 13:33:25] NAME="CentOS Linux"
[2025-10-11 13:33:25] VERSION="7 (Core)"
[2025-10-11 13:33:25] ID="centos"
[2025-10-11 13:33:25] ID_LIKE="rhel fedora"
[2025-10-11 13:33:25] VERSION_ID="7"
[2025-10-11 13:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:33:25] ANSI_COLOR="0;31"
[2025-10-11 13:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:33:25] HOME_URL="https://www.centos.org/"
[2025-10-11 13:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:33:25] 
[2025-10-11 13:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:33:25] 
[2025-10-11 13:33:25] 2025-10-11 17:32:54,769 | INFO     | ***************************************
[2025-10-11 13:33:25] 2025-10-11 17:32:55,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 13:33:25] 2025-10-11 17:32:55,284 | INFO     | sufficient remaining disk space (83809533952 B)
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | INFO     | update_server=False
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:33:25] 2025-10-11 17:32:55,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:33:25] 2025-10-11 17:32:55,286 | INFO     | aborting loop
[2025-10-11 13:33:25] 2025-10-11 17:32:55,510 | INFO     | all job control threads have been joined
[2025-10-11 13:33:25] 2025-10-11 17:32:55,603 | INFO     | all data control threads have been joined
[2025-10-11 13:33:25] 2025-10-11 17:32:55,603 | INFO     | all payload control threads have been joined
[2025-10-11 13:33:25] 2025-10-11 17:32:56,290 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,291 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,291 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,515 | INFO     | [job] control thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,585 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,609 | INFO     | [data] control thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,609 | INFO     | [payload] control thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,684 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:56,951 | INFO     | [job] validate thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,104 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,127 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,291 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,472 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,740 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:57,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:32:58,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:33:25] 2025-10-11 17:33:02,101 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:33:25] 2025-10-11 17:33:07,684 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:33:25] 2025-10-11 17:33:09,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950640703296)>', '<ExcThread(monitor, started 139950158767872)>']
[2025-10-11 13:33:25] 2025-10-11 17:33:14,773 | INFO     | all workflow threads have been joined
[2025-10-11 13:33:25] 2025-10-11 17:33:14,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:33:25] 2025-10-11 17:33:14,773 | INFO     | traces error code: 0
[2025-10-11 13:33:25] 2025-10-11 17:33:14,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:33:25] 2025-10-11 17:33:25,610 | INFO     | PID=2321001 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | INFO     | .. there are 5 such processes running
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:33:25] 2025-10-11 17:33:25,611 | INFO     | [monitor] control thread has ended
[2025-10-11 13:33:25] 2025-10-11 17:33:25,687 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:33:25] 2025-10-11 17:33:25,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:33:25] 2025-10-11 17:33:25,691 [wrapper] pilotpid: 2321001
[2025-10-11 13:33:25] 2025-10-11 17:33:25,693 [wrapper] Pilot exit status: 0
[2025-10-11 13:33:25] 2025-10-11 17:33:25,701 [wrapper] pandaids: 6838117517
[2025-10-11 13:33:25] 2025-10-11 17:33:25,750 [wrapper] cleanup supervisor_pilot 2410847 2321002
[2025-10-11 13:33:25] 2025-10-11 17:33:25,753 [wrapper] Test setup, not cleaning
[2025-10-11 13:33:25] 2025-10-11 17:33:25,754 [wrapper] apfmon messages muted
[2025-10-11 13:33:25] 2025-10-11 17:33:25,756 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:33:25] 2025-10-11 17:33:25,758 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:33:25]  *** Error codes and diagnostics ***
[2025-10-11 13:33:25]     "exeErrorCode": 0,
[2025-10-11 13:33:25]     "exeErrorDiag": "",
[2025-10-11 13:33:25]     "pilotErrorCode": 0,
[2025-10-11 13:33:25]     "pilotErrorDiag": "",
[2025-10-11 13:33:25]  *** Listing of results directory ***
[2025-10-11 13:33:25] total 406816
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 01:36 queuedata.json
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 01:36 pilot3.tar.gz
[2025-10-11 13:33:25] -rwx------. 1 boincer umatlas     36292 Oct 11 01:37 runpilot2-wrapper.sh
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas       100 Oct 11 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:33:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 12:48 run_atlas
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas       105 Oct 11 12:48 job.xml
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas 219370571 Oct 11 12:48 EVNT.46676267._002094.pool.root.1
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:48 start_atlas.sh
[2025-10-11 13:33:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 12:48 shared
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:48 input.tar.gz
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas         0 Oct 11 12:48 boinc_lockfile
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 12:48 pandaJob.out
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas    975512 Oct 11 12:49 agis_schedconf.cvmfs.json
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas   1560580 Oct 11 12:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:33:25] drwx------. 5 boincer umatlas      4096 Oct 11 12:49 pilot3
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas      6900 Oct 11 13:29 init_data.xml
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas       529 Oct 11 13:32 boinc_task_state.xml
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas 191788386 Oct 11 13:32 HITS.46676269._052110.pool.root.1
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas      1025 Oct 11 13:32 memory_monitor_summary.json
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas    351434 Oct 11 13:32 log.46676269._052110.job.log.tgz.1
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas        95 Oct 11 13:32 pilot_heartbeat.json
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas      7772 Oct 11 13:32 heartbeat.json
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas        27 Oct 11 13:33 wrapper_checkpoint.txt
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:33 boinc_mmap_file
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas       822 Oct 11 13:33 pilotlog.txt
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas    411803 Oct 11 13:33 log.46676269._052110.job.log.1
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas       357 Oct 11 13:33 output.list
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:33 runtime_log
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas    778240 Oct 11 13:33 result.tar.gz
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas      8705 Oct 11 13:33 runtime_log.err
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas       651 Oct 11 13:33 KG3KDmlThR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzJRMDmsaZ9Ao.diag
[2025-10-11 13:33:25] -rw-r--r--. 1 boincer umatlas     22380 Oct 11 13:33 stderr.txt
[2025-10-11 13:33:25] HITS file was successfully produced:
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas 191788386 Oct 11 13:32 shared/HITS.pool.root.1
[2025-10-11 13:33:25]  *** Contents of shared directory: ***
[2025-10-11 13:33:25] total 402868
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas 219370571 Oct 11 12:48 ATLAS.root_0
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:48 start_atlas.sh
[2025-10-11 13:33:25] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:48 input.tar.gz
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas 191788386 Oct 11 13:32 HITS.pool.root.1
[2025-10-11 13:33:25] -rw-------. 1 boincer umatlas    778240 Oct 11 13:33 result.tar.gz
13:33:27 (2317214): run_atlas exited; CPU time 25607.327251
13:33:27 (2317214): called boinc_finish(0)

</stderr_txt>
]]>

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