Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 13:27:20 (7188): vboxwrapper version 26210
2025-10-13 13:27:20 (7188): BOINC client version: 8.0.2
2025-10-13 13:27:20 (7188): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-10-13 13:27:21 (7188): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 13:27:21 (7188): Create VM. (boinc_e4e41543b10fd36b, slot#17)
2025-10-13 13:27:21 (7188): Setting Memory Size for VM. (4800MB)
2025-10-13 13:27:22 (7188): Setting CPU Count for VM. (8)
2025-10-13 13:27:22 (7188): Setting Chipset Options for VM.
2025-10-13 13:27:22 (7188): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 13:27:22 (7188): Setting Boot Options for VM.
2025-10-13 13:27:23 (7188): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 13:27:23 (7188): Enabling VM Network Access.
2025-10-13 13:27:23 (7188): Disabling USB Support for VM.
2025-10-13 13:27:24 (7188): Disabling COM Port Support for VM.
2025-10-13 13:27:24 (7188): Disabling LPT Port Support for VM.
2025-10-13 13:27:24 (7188): Disabling Audio Support for VM.
2025-10-13 13:27:24 (7188): Disabling Clipboard Support for VM.
2025-10-13 13:27:25 (7188): Disabling Drag and Drop Support for VM.
2025-10-13 13:27:25 (7188): Adding storage controller(s) to VM.
2025-10-13 13:27:25 (7188): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 13:27:26 (7188): Adding VirtualBox Guest Additions to VM.
2025-10-13 13:27:26 (7188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 13:27:26 (7188): forwarding host port 62695 to guest port 80
2025-10-13 13:27:26 (7188): Enabling remote desktop for VM.
2025-10-13 13:27:27 (7188): Required extension pack not installed, remote desktop not enabled.
2025-10-13 13:27:27 (7188): Enabling shared directory for VM.
2025-10-13 13:27:27 (7188): Starting VM using VBoxManage interface. (boinc_e4e41543b10fd36b, slot#17)
2025-10-13 13:27:35 (7188): Successfully started VM. (PID = '100212')
2025-10-13 13:27:35 (7188): Reporting VM Process ID to BOINC.
2025-10-13 13:27:35 (7188): Guest Log: BIOS: VirtualBox 7.0.18
2025-10-13 13:27:35 (7188): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 13:27:35 (7188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 13:27:35 (7188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 13:27:35 (7188): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 13:27:35 (7188): Detected: Web Application Enabled (http://localhost:62695)
2025-10-13 13:27:35 (7188): Preference change detected
2025-10-13 13:27:35 (7188): Setting CPU throttle for VM. (100%)
2025-10-13 13:27:35 (7188): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 660 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 13:27:37 (7188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 13:27:37 (7188): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 13:27:40 (7188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 13:27:40 (7188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 13:27:40 (7188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 13:27:47 (7188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 13:27:47 (7188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 13:27:59 (7188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000259 main     Log opened 2025-10-13T13:27:56.866741000Z
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000414 main     OS Product: Linux
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000471 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000525 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000580 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000582 main     Process ID: 1375
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.000583 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 13:27:59 (7188): Guest Log: 00:00:00.001858 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 13:27:59 (7188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 13:27:59 (7188): Guest Log: [INFO] Mounting shared directory
2025-10-13 13:27:59 (7188): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 13:28:03 (7188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 13:28:03 (7188): Guest Log: [INFO] Detected branch: prod
2025-10-13 13:28:03 (7188): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 13:28:03 (7188): Guest Log: Copying input files
2025-10-13 13:28:05 (7188): Guest Log: Copied input files into RunAtlas.
2025-10-13 13:28:06 (7188): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-13 13:28:06 (7188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-13 13:28:06 (7188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-13 13:28:06 (7188): Guest Log: Further information can be found at the LHC@home message board.
2025-10-13 13:28:09 (7188): Guest Log: 00:00:10.005046 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 614 335 000ns (GuestNow=1 760 354 888 256 065 000 ns GuestLast=1 760 362 076 870 400 000 ns fSetTimeLastLoop=true )
2025-10-13 13:29:23 (7188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 13:29:24 (7188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 13:29:24 (7188): Guest Log: 2.6.3.0 1651 1 32224 151660 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-13 13:29:25 (7188): Guest Log: copied the webapp to /var/www
2025-10-13 13:29:25 (7188): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-13 13:29:25 (7188): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-13 13:29:25 (7188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 13:29:25 (7188): Guest Log:  *** Starting ATLAS job. (PandaID=6836605219 taskID=46676269) ***
2025-10-13 15:07:47 (7188): Status Report: Elapsed Time: '6000.000000'
2025-10-13 15:07:47 (7188): Status Report: CPU Time: '31856.578125'
2025-10-13 16:48:01 (7188): Status Report: Elapsed Time: '12000.000000'
2025-10-13 16:48:01 (7188): Status Report: CPU Time: '74451.781250'
2025-10-13 18:28:12 (7188): Status Report: Elapsed Time: '18000.000000'
2025-10-13 18:28:12 (7188): Status Report: CPU Time: '118597.796875'
2025-10-13 18:35:02 (7188): Guest Log:  *** Job finished ***
2025-10-13 18:35:02 (7188): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:58,892 | INFO     | all workflow threads have been joined
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:58,892 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:58,892 | INFO     | traces error code: 0
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:58,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,973 | INFO     | PID=6103 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,974 | INFO     | found 0 job(s) in 20 queues
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:34:59,975 | INFO     | [monitor] control thread has ended
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,118 [wrapper] ==== pilot stdout END ====
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,127 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,136 [wrapper] pilotpid: 6103
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,145 [wrapper] Pilot exit status: 0
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,234 [wrapper] pandaids: 6836605219
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,292 [wrapper] cleanup supervisor_pilot 19154 6104
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,300 [wrapper] Test setup, not cleaning
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,308 [wrapper] apfmon messages muted
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,318 [wrapper] ==== wrapper stdout END ====
2025-10-13 18:35:02 (7188): Guest Log: 2025-10-13 16:35:00,326 [wrapper] ==== wrapper stderr END ====
2025-10-13 18:35:02 (7188): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 18:35:02 (7188): Guest Log:     "exeErrorCode": 0,
2025-10-13 18:35:02 (7188): Guest Log:     "exeErrorDiag": "",
2025-10-13 18:35:02 (7188): Guest Log:     "pilotErrorCode": 0,
2025-10-13 18:35:02 (7188): Guest Log:     "pilotErrorDiag": "",
2025-10-13 18:35:02 (7188): Guest Log:  *** Listing of results directory ***
2025-10-13 18:35:02 (7188): Guest Log: total 194296
2025-10-13 18:35:02 (7188): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 22:57 pilot3.tar.gz
2025-10-13 18:35:02 (7188): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 23:20 queuedata.json
2025-10-13 18:35:02 (7188): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 23:20 runpilot2-wrapper.sh
2025-10-13 18:35:02 (7188): Guest Log: -rwxr-xr-x. 1 atlas atlas      8829 Oct 13 11:28 init_data.xml
2025-10-13 18:35:02 (7188): Guest Log: -rwxr-xr-x. 1 atlas atlas    569678 Oct 13 11:28 input.tar.gz
2025-10-13 18:35:02 (7188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 11:28 start_atlas.sh
2025-10-13 18:35:02 (7188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 11:28 EVNT.46676267._000435.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 18:35:02 (7188): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 11:29 pandaJob.out
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas    972497 Oct 13 11:30 agis_schedconf.cvmfs.json
2025-10-13 18:35:02 (7188): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 11:30 pilot3
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas 189452078 Oct 13 16:33 HITS.46676269._010702.pool.root.1
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas      1037 Oct 13 16:34 memory_monitor_summary.json
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 16:34 agis_ddmendpoints.agis.ALL.json
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas    499901 Oct 13 16:34 log.46676269._010702.job.log.tgz.1
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas      7836 Oct 13 16:34 heartbeat.json
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 16:34 pilot_heartbeat.json
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas       744 Oct 13 16:34 pilotlog.txt
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas   2341692 Oct 13 16:35 log.46676269._010702.job.log.1
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 16:35 output.list
2025-10-13 18:35:02 (7188): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 16:35 runtime_log
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas   2856960 Oct 13 16:35 result.tar.gz
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas       660 Oct 13 16:35 v2yMDmVdsQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5BNMDmnbPOIm.diag
2025-10-13 18:35:02 (7188): Guest Log: -rw-r--r--. 1 atlas atlas      8640 Oct 13 16:35 runtime_log.err
2025-10-13 18:35:02 (7188): Guest Log: Looking for outputfile HITS.46676269._010702.pool.root.1
2025-10-13 18:35:02 (7188): Guest Log: HITS file was successfully produced
2025-10-13 18:35:02 (7188): Guest Log: -rw-------. 1 atlas atlas 189452078 Oct 13 16:33 /home/atlas/RunAtlas/HITS.46676269._010702.pool.root.1
2025-10-13 18:35:03 (7188): Guest Log: Successfully finished the ATLAS job!
2025-10-13 18:35:03 (7188): Guest Log: Copying the results back to the shared directory!
2025-10-13 18:35:03 (7188): Guest Log:  *** Contents of shared directory: ***
2025-10-13 18:35:03 (7188): Guest Log: total 405720
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root 222542029 Oct 13 11:27 ATLAS.root_0
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root 189452078 Oct 13 16:35 HITS.pool.root.1
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root      8829 Oct 13 11:27 init_data.xml
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root    569678 Oct 11 15:49 input.tar.gz
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root   2856960 Oct 13 16:35 result.tar.gz
2025-10-13 18:35:03 (7188): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 15:49 start_atlas.sh
2025-10-13 18:35:03 (7188): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 18:35:04 (7188): VM Completion File Detected.
2025-10-13 18:35:04 (7188): Powering off VM.
2025-10-13 18:35:04 (7188): Successfully stopped VM.
2025-10-13 18:35:04 (7188): Deregistering VM. (boinc_e4e41543b10fd36b, slot#17)
2025-10-13 18:35:04 (7188): Removing network bandwidth throttle group from VM.
2025-10-13 18:35:05 (7188): Removing VM from VirtualBox.
2025-10-13 18:35:10 (7188): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN