Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:46:01 (1900442): wrapper (7.7.26015): starting
13:46:01 (1900442): wrapper: running run_atlas (--nthreads 5)
[2025-10-11 13:46:01] Arguments: --nthreads 5
[2025-10-11 13:46:01] Threads: 5
[2025-10-11 13:46:01] Checking for CVMFS
[2025-10-11 13:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:46:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:46:01] 2.11.0.0 2490241 2012 101748 151591 1 188 4038154 4096000 6206 130560 0 10060202 99.998 73532 2924 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 13:46:01] CVMFS is ok
[2025-10-11 13:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:46:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 13:46:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 13:46:01] Further information can be found at the LHC@home message board.
[2025-10-11 13:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:46:01] Checking for apptainer binary...
[2025-10-11 13:46:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:46:01] Running /usr/bin/apptainer --version
[2025-10-11 13:46:01] apptainer version 1.4.3
[2025-10-11 13:46:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:46:01] x32-linux4
[2025-10-11 13:46:01] apptainer works
[2025-10-11 13:46:01] Set ATHENA_PROC_NUMBER=5
[2025-10-11 13:46:01] Set ATHENA_CORE_NUMBER=5
[2025-10-11 13:46:01] Starting ATLAS job with PandaID=6838182430
[2025-10-11 13:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:46:30]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | chi2: 0.0041593275536209095
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | current chi2=0.0041593275536209095 (change=52.44400195862847 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | sum of square deviations: 329031285.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | sum of deviations: -240362386.99999925
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | mean x: 1760208794.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | mean y: 2363673.8235294116
[2025-10-11 15:46:30] 2025-10-11 19:45:24,359 | INFO     | -- intersect: 1288223122.7859023
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | intersect: 1288223122.7859023
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | chi2: 0.0025318430598249768
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | current chi2=0.0025318430598249768 (change=39.128548372659985 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | sum of square deviations: 282974608.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | sum of deviations: 256138451.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | mean x: 1760208947.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | mean y: 2362028.4536082475
[2025-10-11 15:46:30] 2025-10-11 19:45:24,360 | INFO     | -- intersect: -1590915885.4464302
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | intersect: -1590915885.4464302
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | chi2: 0.0015716038784945074
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | current chi2=0.0015716038784945074 (change=37.92648906906771 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | sum of deviations: 754343476.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | mean x: 1760209099.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | mean y: 2360198.032608696
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | -- intersect: -5497388030.82827
[2025-10-11 15:46:30] 2025-10-11 19:45:24,361 | INFO     | intersect: -5497388030.82827
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | chi2: 0.0001162533636581065
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | current chi2=0.0001162533636581065 (change=92.60288389148864 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | sum of square deviations: 204163828.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | sum of deviations: 651320973.0000001
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | mean x: 1760209252.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | mean y: 2360618.3103448274
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | -- intersect: -5613037632.824731
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | intersect: -5613037632.824731
[2025-10-11 15:46:30] 2025-10-11 19:45:24,362 | INFO     | chi2: 8.707512793482437e-05
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | current chi2=8.707512793482437e-05 (change=25.09883138443495 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | sum of square deviations: 170944600.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | sum of deviations: 487885564.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | mean x: 1760209404.5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | mean y: 2361369.6341463416
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | -- intersect: -5021375885.363777
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | intersect: -5021375885.363777
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | chi2: 6.541926907724413e-05
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | current chi2=6.541926907724413e-05 (change=24.870315291169735 %)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,363 | INFO     | left removable region: 70
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | sum of square deviations: 21358540.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | sum of deviations: 11490448.000000019
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | mean x: 1760210289.0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | mean y: 2365182.1219512196
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | -- intersect: -944591154.5386775
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | intersect: -944591154.5386775
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | chi2: 1.4062217500189854e-05
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | -- intersect: -944591154.5386775
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | current memory leak: 0.54 B/s (using 41 data points, chi2=0.00)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,364 | INFO     | could have reported an average CPU frequency of 3803 MHz (7 samples)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | ..............................
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . Timing measurements:
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . get job = 0 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . initial setup = 2 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . payload setup = 5 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . stage-in = 0 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . payload execution = 7121 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . stage-out = 0 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | . log creation = 0 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,365 | INFO     | ..............................
[2025-10-11 15:46:30] 2025-10-11 19:45:24,434 | INFO     | 
[2025-10-11 15:46:30] 2025-10-11 19:45:24,434 | INFO     | job summary report
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | --------------------------------------------------
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | PanDA job id: 6838182430
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | task id: 46676269
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | errors: (none)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | pilot state: finished 
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | transexitcode: 0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | exeerrorcode: 0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | exeerrordiag: 
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | exitcode: 0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | exitmsg: OK
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | cpuconsumptiontime: 28161 s
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | nevents: 400
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | neventsw: 0
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | pid: 1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | pgrp: 1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:24,435 | INFO     | corecount: 5
[2025-10-11 15:46:30] 2025-10-11 19:45:24,436 | INFO     | event service: False
[2025-10-11 15:46:30] 2025-10-11 19:45:24,436 | INFO     | sizes: {0: 2348663, 1: 2348918, 5: 2349180, 11: 2349208, 7130: 2376569, 7131: 2385581, 7133: 2385765, 7137: 2385959}
[2025-10-11 15:46:30] 2025-10-11 19:45:24,436 | INFO     | --------------------------------------------------
[2025-10-11 15:46:30] 2025-10-11 19:45:24,436 | INFO     | 
[2025-10-11 15:46:30] 2025-10-11 19:45:24,436 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-11 15:46:30] 2025-10-11 19:45:24,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | job 6838182430 has completed (purged errors)
[2025-10-11 15:46:30] 2025-10-11 19:45:24,453 | INFO     | overall cleanup function is called
[2025-10-11 15:46:30] 2025-10-11 19:45:25,460 | INFO     | --- collectZombieJob: --- 10, [1910945]
[2025-10-11 15:46:30] 2025-10-11 19:45:25,461 | INFO     | zombie collector waiting for pid 1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:25,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:46:30] 2025-10-11 19:45:25,461 | INFO     | collected zombie processes
[2025-10-11 15:46:30] 2025-10-11 19:45:25,461 | INFO     | will attempt to kill all subprocesses of pid=1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:25,610 | INFO     | process IDs to be killed: [1910945] (in reverse order)
[2025-10-11 15:46:30] 2025-10-11 19:45:25,665 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:46:30] 2025-10-11 19:45:25,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:46:30] 2025-10-11 19:45:25,669 | INFO     | did not find any defunct processes belonging to 1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:25,673 | INFO     | did not find any defunct processes belonging to 1910945
[2025-10-11 15:46:30] 2025-10-11 19:45:25,673 | INFO     | ready for new job
[2025-10-11 15:46:30] 2025-10-11 19:45:25,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:46:30] 2025-10-11 19:45:25,675 | INFO     | ***************************************
[2025-10-11 15:46:30] 2025-10-11 19:45:25,675 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:46:30] 2025-10-11 19:45:25,675 | INFO     | ***************************************
[2025-10-11 15:46:30] 2025-10-11 19:45:25,675 | INFO     | 
[2025-10-11 15:46:30] 2025-10-11 19:45:25,676 | INFO     | architecture information:
[2025-10-11 15:46:30] 2025-10-11 19:45:25,677 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:46:30] 2025-10-11 19:45:25,688 | INFO     | cat /etc/os-release:
[2025-10-11 15:46:30] NAME="CentOS Linux"
[2025-10-11 15:46:30] VERSION="7 (Core)"
[2025-10-11 15:46:30] ID="centos"
[2025-10-11 15:46:30] ID_LIKE="rhel fedora"
[2025-10-11 15:46:30] VERSION_ID="7"
[2025-10-11 15:46:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:46:30] ANSI_COLOR="0;31"
[2025-10-11 15:46:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:46:30] HOME_URL="https://www.centos.org/"
[2025-10-11 15:46:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:46:30] 
[2025-10-11 15:46:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:46:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:46:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:46:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:46:30] 
[2025-10-11 15:46:30] 2025-10-11 19:45:25,689 | INFO     | ***************************************
[2025-10-11 15:46:30] 2025-10-11 19:45:26,191 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-11 15:46:30] 2025-10-11 19:45:26,204 | INFO     | sufficient remaining disk space (146816368640 B)
[2025-10-11 15:46:30] 2025-10-11 19:45:26,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | INFO     | update_server=False
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | INFO     | aborting loop
[2025-10-11 15:46:30] 2025-10-11 19:45:26,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:46:30] 2025-10-11 19:45:26,251 | INFO     | all data control threads have been joined
[2025-10-11 15:46:30] 2025-10-11 19:45:26,318 | INFO     | all payload control threads have been joined
[2025-10-11 15:46:30] 2025-10-11 19:45:26,330 | INFO     | all job control threads have been joined
[2025-10-11 15:46:30] 2025-10-11 19:45:26,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:46:30] 2025-10-11 19:45:26,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:46:30] 2025-10-11 19:45:27,210 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,210 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,210 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,256 | INFO     | [data] control thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,323 | INFO     | [payload] control thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,335 | INFO     | [job] control thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,531 | INFO     | [job] validate thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,751 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,773 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:27,922 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:28,424 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:28,543 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:28,616 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:28,700 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:30,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:36,652 | INFO     | job.realtimelogging is not enabled
[2025-10-11 15:46:30] 2025-10-11 19:45:37,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:46:30] 2025-10-11 19:45:56,212 | INFO     | PID=1904278 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:46:30] 2025-10-11 19:45:56,212 | INFO     | .. there are 8 such processes running
[2025-10-11 15:46:30] 2025-10-11 19:45:56,212 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:46:30] 2025-10-11 19:45:56,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:46:30] 2025-10-11 19:45:56,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:46:30] 2025-10-11 19:46:09,459 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-11 15:46:30] 2025-10-11 19:46:24,067 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:46:30] 2025-10-11 19:46:25,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134600975460160)>', '<ExcThread(monitor, started 134600483387136)>']
[2025-10-11 15:46:30] 2025-10-11 19:46:25,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:46:30] 2025-10-11 19:46:25,350 | INFO     | [monitor] control thread has ended
[2025-10-11 15:46:30] 2025-10-11 19:46:30,035 | INFO     | all workflow threads have been joined
[2025-10-11 15:46:30] 2025-10-11 19:46:30,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:46:30] 2025-10-11 19:46:30,036 | INFO     | traces error code: 0
[2025-10-11 15:46:30] 2025-10-11 19:46:30,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:46:30] 2025-10-11 19:46:30,102 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:46:30] 2025-10-11 19:46:30,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:46:30] 2025-10-11 19:46:30,106 [wrapper] pilotpid: 1904278
[2025-10-11 15:46:30] 2025-10-11 19:46:30,108 [wrapper] Pilot exit status: 0
[2025-10-11 15:46:30] 2025-10-11 19:46:30,114 [wrapper] pandaids: 6838182430
[2025-10-11 15:46:30] 2025-10-11 19:46:30,148 [wrapper] cleanup supervisor_pilot 2103740 1904279
[2025-10-11 15:46:30] 2025-10-11 19:46:30,150 [wrapper] Test setup, not cleaning
[2025-10-11 15:46:30] 2025-10-11 19:46:30,152 [wrapper] apfmon messages muted
[2025-10-11 15:46:30] 2025-10-11 19:46:30,154 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:46:30] 2025-10-11 19:46:30,156 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:46:30]  *** Error codes and diagnostics ***
[2025-10-11 15:46:30]     "exeErrorCode": 0,
[2025-10-11 15:46:30]     "exeErrorDiag": "",
[2025-10-11 15:46:30]     "pilotErrorCode": 0,
[2025-10-11 15:46:30]     "pilotErrorDiag": "",
[2025-10-11 15:46:30]  *** Listing of results directory ***
[2025-10-11 15:46:30] total 413152
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 15:46:30] -rwx------ 1 boinc boinc     36292 Oct 11 03:01 runpilot2-wrapper.sh
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc      5112 Oct 11 03:01 queuedata.json
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc       100 Oct 11 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:46:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 13:46 run_atlas
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc       105 Oct 11 13:46 job.xml
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc    569675 Oct 11 13:46 input.tar.gz
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc 220016080 Oct 11 13:46 EVNT.46676267._002140.pool.root.1
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:46 start_atlas.sh
[2025-10-11 15:46:30] drwxrwx--x 2 boinc boinc      4096 Oct 11 13:46 shared
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc      9723 Oct 11 13:46 init_data.xml
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:46 boinc_setup_complete
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:46 boinc_lockfile
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc      2549 Oct 11 13:46 pandaJob.out
[2025-10-11 15:46:30] -rw------- 1 boinc boinc    975520 Oct 11 13:46 agis_schedconf.cvmfs.json
[2025-10-11 15:46:30] -rw------- 1 boinc boinc   1560580 Oct 11 13:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:46:30] drwx------ 5 boinc boinc      4096 Oct 11 13:46 pilot3
[2025-10-11 15:46:30] -rw------- 1 boinc boinc 196449659 Oct 11 15:44 HITS.46676269._053299.pool.root.1
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc       529 Oct 11 15:44 boinc_task_state.xml
[2025-10-11 15:46:30] -rw------- 1 boinc boinc        95 Oct 11 15:45 pilot_heartbeat.json
[2025-10-11 15:46:30] -rw------- 1 boinc boinc      1026 Oct 11 15:45 memory_monitor_summary.json
[2025-10-11 15:46:30] -rw------- 1 boinc boinc    305107 Oct 11 15:45 log.46676269._053299.job.log.tgz.1
[2025-10-11 15:46:30] -rw------- 1 boinc boinc      7742 Oct 11 15:45 heartbeat.json
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:46 boinc_mmap_file
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:46 wrapper_checkpoint.txt
[2025-10-11 15:46:30] -rw------- 1 boinc boinc      4903 Oct 11 15:46 pilotlog.txt
[2025-10-11 15:46:30] -rw------- 1 boinc boinc   1040865 Oct 11 15:46 log.46676269._053299.job.log.1
[2025-10-11 15:46:30] -rw------- 1 boinc boinc       357 Oct 11 15:46 output.list
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:46 runtime_log
[2025-10-11 15:46:30] -rw------- 1 boinc boinc   1361920 Oct 11 15:46 result.tar.gz
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc      8764 Oct 11 15:46 runtime_log.err
[2025-10-11 15:46:30] -rw------- 1 boinc boinc       643 Oct 11 15:46 rNrNDmlmiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9QRMDmMGUj2n.diag
[2025-10-11 15:46:30] -rw-r--r-- 1 boinc boinc     21039 Oct 11 15:46 stderr.txt
[2025-10-11 15:46:30] HITS file was successfully produced:
[2025-10-11 15:46:30] -rw------- 1 boinc boinc 196449659 Oct 11 15:44 shared/HITS.pool.root.1
[2025-10-11 15:46:30]  *** Contents of shared directory: ***
[2025-10-11 15:46:30] total 408624
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc    569675 Oct 11 13:46 input.tar.gz
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc 220016080 Oct 11 13:46 ATLAS.root_0
[2025-10-11 15:46:30] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:46 start_atlas.sh
[2025-10-11 15:46:30] -rw------- 1 boinc boinc 196449659 Oct 11 15:44 HITS.pool.root.1
[2025-10-11 15:46:30] -rw------- 1 boinc boinc   1361920 Oct 11 15:46 result.tar.gz
15:46:31 (1900442): run_atlas exited; CPU time 28257.517627
15:46:31 (1900442): called boinc_finish(0)

</stderr_txt>
]]>

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