Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:07 (242783): wrapper (7.7.26015): starting
19:14:07 (242783): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 19:14:07] Arguments: --nthreads 6
[2025-10-14 19:14:07] Threads: 6
[2025-10-14 19:14:07] Checking for CVMFS
[2025-10-14 19:14:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 19:14:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 19:14:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 19:14:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 19:14:08] 2.13.1.0 3910062 835 65028 151693 1 57 30821373 52428800 922 130560 0 1608760 99.995 33220 117 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 19:14:08] CVMFS is ok
[2025-10-14 19:14:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 19:14:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 19:14:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 19:14:08] Further information can be found at the LHC@home message board.
[2025-10-14 19:14:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 19:14:08] Checking for apptainer binary...
[2025-10-14 19:14:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 19:14:08] Running /usr/bin/apptainer --version
[2025-10-14 19:14:08] apptainer version 1.4.1-1.el9
[2025-10-14 19:14:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 19:14:08] Atto003
[2025-10-14 19:14:08] apptainer works
[2025-10-14 19:14:08] Set ATHENA_PROC_NUMBER=6
[2025-10-14 19:14:08] Set ATHENA_CORE_NUMBER=6
[2025-10-14 19:14:08] Starting ATLAS job with PandaID=6838363478
[2025-10-14 19:14:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 20:33:37]  *** The last 200 lines of the pilot log: ***
[2025-10-14 20:33:37] 2025-10-14 11:33:01,588 | INFO     |  -- lfn=log.46676269._056021.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 20:33:37] 2025-10-14 11:33:01,588 | INFO     | stage-out finished correctly
[2025-10-14 20:33:37] 2025-10-14 11:33:01,689 | INFO     | monitor loop #360: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:01,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:03,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 20:33:37] 2025-10-14 11:33:03,536 | INFO     | time since job start (4727s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:04,192 | INFO     | monitor loop #361: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:04,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:05,542 | INFO     | time since job start (4729s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:05,726 | INFO     | job 6838363478 has state=finished
[2025-10-14 20:33:37] 2025-10-14 11:33:05,726 | INFO     | preparing for final server update for job 6838363478 in state='finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:05,727 | INFO     | this job has now completed (state=finished)
[2025-10-14 20:33:37] 2025-10-14 11:33:05,727 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 20:33:37] 2025-10-14 11:33:05,727 | INFO     | log transfer has been attempted: DONE
[2025-10-14 20:33:37] 2025-10-14 11:33:05,727 | INFO     | job 6838363478 has finished - writing final server update
[2025-10-14 20:33:37] 2025-10-14 11:33:05,727 | INFO     | total number of processed events: 400 (read)
[2025-10-14 20:33:37] 2025-10-14 11:33:05,728 | INFO     | executing command: lscpu
[2025-10-14 20:33:37] 2025-10-14 11:33:05,739 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 20:33:37] 2025-10-14 11:33:06,695 | INFO     | monitor loop #362: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:06,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:07,547 | INFO     | time since job start (4731s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:09,198 | INFO     | monitor loop #363: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:09,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:09,552 | INFO     | time since job start (4733s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:11,557 | INFO     | time since job start (4735s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:11,700 | INFO     | monitor loop #364: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:11,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:13,562 | INFO     | time since job start (4737s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:14,203 | INFO     | monitor loop #365: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:14,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:15,567 | INFO     | time since job start (4739s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:16,705 | INFO     | monitor loop #366: job 0:6838363478 is in state 'finished'
[2025-10-14 20:33:37] 2025-10-14 11:33:16,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,556 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 20:33:37] 2025-10-14 11:33:17,557 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3899.8308749999997
[2025-10-14 20:33:37] 2025-10-14 11:33:17,558 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838363478/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,559 | INFO     | extracted standard info from prmon json
[2025-10-14 20:33:37] 2025-10-14 11:33:17,559 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 20:33:37] 2025-10-14 11:33:17,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 20:33:37] 2025-10-14 11:33:17,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 20:33:37] 2025-10-14 11:33:17,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | fitting pss+swap vs Time
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | sum of square deviations: 110960220.0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | sum of deviations: -2135838689.0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | mean x: 1760439313.0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | mean y: 2524894.3943661973
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | -- intersect: 33888672509.656673
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | intersect: 33888672509.656673
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | chi2: 0.04745539573435913
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | -- intersect: 33888672509.656673
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | current memory leak: -19.25 B/s (using 71 data points, chi2=0.05)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | could have reported an average CPU frequency of 3755 MHz (6 samples)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | ..............................
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | . Timing measurements:
[2025-10-14 20:33:37] 2025-10-14 11:33:17,560 | INFO     | . get job = 0 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . initial setup = 4 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . payload setup = 2 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . stage-in = 0 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . payload execution = 4707 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . stage-out = 0 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | . log creation = 0 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,561 | INFO     | ..............................
[2025-10-14 20:33:37] 2025-10-14 11:33:17,578 | INFO     | time since job start (4741s) is within the limit (172800.0s)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,595 | INFO     | 
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | job summary report
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | --------------------------------------------------
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | PanDA job id: 6838363478
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | task id: 46676269
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | errors: (none)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | pilot state: finished 
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | transexitcode: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | exeerrorcode: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | exeerrordiag: 
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | exitcode: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | exitmsg: OK
[2025-10-14 20:33:37] 2025-10-14 11:33:17,596 | INFO     | cpuconsumptiontime: 25622 s
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | nevents: 400
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | neventsw: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | pid: 253314
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | pgrp: 253314
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | corecount: 6
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | event service: False
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4713: 2384454, 4715: 2384454, 4729: 2384648}
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | --------------------------------------------------
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | 
[2025-10-14 20:33:37] 2025-10-14 11:33:17,597 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 20:33:37] 2025-10-14 11:33:17,607 | INFO     | job 6838363478 has completed (purged errors)
[2025-10-14 20:33:37] 2025-10-14 11:33:17,607 | INFO     | overall cleanup function is called
[2025-10-14 20:33:37] 2025-10-14 11:33:18,612 | INFO     | --- collectZombieJob: --- 10, [253314]
[2025-10-14 20:33:37] 2025-10-14 11:33:18,612 | INFO     | zombie collector waiting for pid 253314
[2025-10-14 20:33:37] 2025-10-14 11:33:18,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 20:33:37] 2025-10-14 11:33:18,613 | INFO     | collected zombie processes
[2025-10-14 20:33:37] 2025-10-14 11:33:18,613 | INFO     | will attempt to kill all subprocesses of pid=253314
[2025-10-14 20:33:37] 2025-10-14 11:33:18,681 | INFO     | PID=246577 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 20:33:37] 2025-10-14 11:33:18,682 | INFO     | .. there are 2 such processes running
[2025-10-14 20:33:37] 2025-10-14 11:33:18,706 | INFO     | process IDs to be killed: [253314] (in reverse order)
[2025-10-14 20:33:37] 2025-10-14 11:33:18,723 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 20:33:37] 2025-10-14 11:33:18,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 20:33:37] 2025-10-14 11:33:18,725 | INFO     | did not find any defunct processes belonging to 253314
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | did not find any defunct processes belonging to 253314
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | ready for new job
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | ***************************************
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | ***************************************
[2025-10-14 20:33:37] 2025-10-14 11:33:18,726 | INFO     | 
[2025-10-14 20:33:37] 2025-10-14 11:33:18,727 | INFO     | architecture information:
[2025-10-14 20:33:37] 2025-10-14 11:33:18,727 | INFO     | executing command: cat /etc/os-release
[2025-10-14 20:33:37] 2025-10-14 11:33:18,732 | INFO     | cat /etc/os-release:
[2025-10-14 20:33:37] NAME="CentOS Linux"
[2025-10-14 20:33:37] VERSION="7 (Core)"
[2025-10-14 20:33:37] ID="centos"
[2025-10-14 20:33:37] ID_LIKE="rhel fedora"
[2025-10-14 20:33:37] VERSION_ID="7"
[2025-10-14 20:33:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 20:33:37] ANSI_COLOR="0;31"
[2025-10-14 20:33:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 20:33:37] HOME_URL="https://www.centos.org/"
[2025-10-14 20:33:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 20:33:37] 
[2025-10-14 20:33:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 20:33:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 20:33:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 20:33:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 20:33:37] 
[2025-10-14 20:33:37] 2025-10-14 11:33:18,732 | INFO     | ***************************************
[2025-10-14 20:33:37] 2025-10-14 11:33:19,235 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 20:33:37] 2025-10-14 11:33:19,241 | INFO     | sufficient remaining disk space (112681025536 B)
[2025-10-14 20:33:37] 2025-10-14 11:33:19,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 20:33:37] 2025-10-14 11:33:19,241 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 20:33:37] 2025-10-14 11:33:19,241 | INFO     | update_server=False
[2025-10-14 20:33:37] 2025-10-14 11:33:19,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 20:33:37] 2025-10-14 11:33:19,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 20:33:37] 2025-10-14 11:33:19,517 | INFO     | all payload control threads have been joined
[2025-10-14 20:33:37] 2025-10-14 11:33:19,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 20:33:37] 2025-10-14 11:33:19,690 | INFO     | all job control threads have been joined
[2025-10-14 20:33:37] 2025-10-14 11:33:19,900 | INFO     | all data control threads have been joined
[2025-10-14 20:33:37] 2025-10-14 11:33:20,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 20:33:37] 2025-10-14 11:33:20,213 | INFO     | aborting loop
[2025-10-14 20:33:37] 2025-10-14 11:33:20,245 | INFO     | [job] retrieve thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,247 | INFO     | [job] queue monitor thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,255 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,263 | INFO     | [job] validate thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,360 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,522 | INFO     | [payload] control thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,691 | INFO     | [job] control thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:20,906 | INFO     | [data] control thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,219 | INFO     | [job] job monitor thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,251 | INFO     | [data] copytool_in thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,471 | INFO     | [payload] validate_post thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,645 | INFO     | [data] copytool_out thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,651 | INFO     | [payload] failed_post thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:21,734 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:23,177 | INFO     | [monitor] cgroup control has ended
[2025-10-14 20:33:37] 2025-10-14 11:33:23,247 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:30,215 | INFO     | job.realtimelogging is not enabled
[2025-10-14 20:33:37] 2025-10-14 11:33:31,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 20:33:37] 2025-10-14 11:33:32,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084916533056)>', '<ExcThread(monitor, started 140084418426624)>']
[2025-10-14 20:33:37] 2025-10-14 11:33:33,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 20:33:37] 2025-10-14 11:33:33,307 | INFO     | [monitor] control thread has ended
[2025-10-14 20:33:37] 2025-10-14 11:33:37,736 | INFO     | all workflow threads have been joined
[2025-10-14 20:33:37] 2025-10-14 11:33:37,736 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 20:33:37] 2025-10-14 11:33:37,736 | INFO     | traces error code: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:37,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 20:33:37] 2025-10-14 11:33:37,791 [wrapper] ==== pilot stdout END ====
[2025-10-14 20:33:37] 2025-10-14 11:33:37,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 20:33:37] 2025-10-14 11:33:37,793 [wrapper] pilotpid: 246577
[2025-10-14 20:33:37] 2025-10-14 11:33:37,794 [wrapper] Pilot exit status: 0
[2025-10-14 20:33:37] 2025-10-14 11:33:37,798 [wrapper] pandaids: 6838363478
[2025-10-14 20:33:37] 2025-10-14 11:33:37,808 [wrapper] cleanup supervisor_pilot  291335 246578
[2025-10-14 20:33:37] 2025-10-14 11:33:37,810 [wrapper] Test setup, not cleaning
[2025-10-14 20:33:37] 2025-10-14 11:33:37,811 [wrapper] apfmon messages muted
[2025-10-14 20:33:37] 2025-10-14 11:33:37,812 [wrapper] ==== wrapper stdout END ====
[2025-10-14 20:33:37] 2025-10-14 11:33:37,813 [wrapper] ==== wrapper stderr END ====
[2025-10-14 20:33:37]  *** Error codes and diagnostics ***
[2025-10-14 20:33:37]     "exeErrorCode": 0,
[2025-10-14 20:33:37]     "exeErrorDiag": "",
[2025-10-14 20:33:37]     "pilotErrorCode": 0,
[2025-10-14 20:33:37]     "pilotErrorDiag": "",
[2025-10-14 20:33:37]  *** Listing of results directory ***
[2025-10-14 20:33:37] total 410040
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc    557409 Oct 11 19:16 pilot3.tar.gz
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc      5112 Oct 11 19:21 queuedata.json
[2025-10-14 20:33:37] -rwx------. 1 boinc boinc     36292 Oct 11 19:21 runpilot2-wrapper.sh
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc       100 Oct 14 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 20:33:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 19:14 run_atlas
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc       105 Oct 14 19:14 job.xml
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc     15120 Oct 14 19:14 start_atlas.sh
[2025-10-14 20:33:37] drwxrwx--x. 2 boinc boinc        68 Oct 14 19:14 shared
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc    569677 Oct 14 19:14 input.tar.gz
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc      9345 Oct 14 19:14 init_data.xml
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc 219834388 Oct 14 19:14 EVNT.46676267._002251.pool.root.1
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc         0 Oct 14 19:14 boinc_lockfile
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc      2550 Oct 14 19:14 pandaJob.out
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc    972837 Oct 14 19:14 agis_schedconf.cvmfs.json
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc   1560580 Oct 14 19:14 agis_ddmendpoints.agis.ALL.json
[2025-10-14 20:33:37] drwx------. 5 boinc boinc      4096 Oct 14 19:14 pilot3
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc 194149437 Oct 14 20:32 HITS.46676269._056021.pool.root.1
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc        95 Oct 14 20:32 pilot_heartbeat.json
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc      1016 Oct 14 20:32 memory_monitor_summary.json
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc    296253 Oct 14 20:33 log.46676269._056021.job.log.tgz.1
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc       529 Oct 14 20:33 boinc_task_state.xml
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc      7771 Oct 14 20:33 heartbeat.json
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc      8192 Oct 14 20:33 boinc_mmap_file
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc        27 Oct 14 20:33 wrapper_checkpoint.txt
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc      4625 Oct 14 20:33 pilotlog.txt
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc    708303 Oct 14 20:33 log.46676269._056021.job.log.1
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc       357 Oct 14 20:33 output.list
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc       620 Oct 14 20:33 runtime_log
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc   1024000 Oct 14 20:33 result.tar.gz
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc       638 Oct 14 20:33 awVMDm8tlR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzgRMDmzNbw2n.diag
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc      8651 Oct 14 20:33 runtime_log.err
[2025-10-14 20:33:37] -rw-r--r--. 1 boinc boinc     22186 Oct 14 20:33 stderr.txt
[2025-10-14 20:33:37] HITS file was successfully produced:
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc 194149437 Oct 14 20:32 shared/HITS.pool.root.1
[2025-10-14 20:33:37]  *** Contents of shared directory: ***
[2025-10-14 20:33:37] total 405860
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc     15120 Oct 14 19:14 start_atlas.sh
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc    569677 Oct 14 19:14 input.tar.gz
[2025-10-14 20:33:37] -rw-r--r--. 2 boinc boinc 219834388 Oct 14 19:14 ATLAS.root_0
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc 194149437 Oct 14 20:32 HITS.pool.root.1
[2025-10-14 20:33:37] -rw-------. 1 boinc boinc   1024000 Oct 14 20:33 result.tar.gz
20:33:39 (242783): run_atlas exited; CPU time 25673.854790
20:33:39 (242783): called boinc_finish(0)

</stderr_txt>
]]>

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