Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:29:54 (13413): wrapper (7.7.26015): starting
11:29:54 (13413): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 11:29:54] Arguments: --nthreads 8
[2025-10-11 11:29:54] Threads: 8
[2025-10-11 11:29:54] Checking for CVMFS
[2025-10-11 11:29:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 11:29:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 11:29:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 11:29:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 11:29:55] 2.11.2.0 27570 82087 79988 151589 0 56 11896502 20275200 1 130560 0 36254294 99.986 2738638 35557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 11:29:55] CVMFS is ok
[2025-10-11 11:29:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 11:29:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 11:29:55] Further information can be found at the LHC@home message board.
[2025-10-11 11:29:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 11:29:55] Checking for apptainer binary...
[2025-10-11 11:29:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 11:29:55] Running /usr/bin/apptainer --version
[2025-10-11 11:29:55] apptainer version 1.3.2-1.el7
[2025-10-11 11:29:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 11:29:56] c-204-23.aglt2.org
[2025-10-11 11:29:56] apptainer works
[2025-10-11 11:29:56] Set ATHENA_PROC_NUMBER=8
[2025-10-11 11:29:56] Set ATHENA_CORE_NUMBER=8
[2025-10-11 11:29:56] Starting ATLAS job with PandaID=6838293282
[2025-10-11 11:29:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:34:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:34:33] 2025-10-11 17:33:33,255 | INFO     | time since job start (7399s) is within the limit (172800.0s)
[2025-10-11 13:34:33] 2025-10-11 17:33:34,246 | INFO     | monitor loop #546: job 0:6838293282 is in state 'finished'
[2025-10-11 13:34:33] 2025-10-11 17:33:34,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,261 | INFO     | time since job start (7401s) is within the limit (172800.0s)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,388 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 13:34:33] 2025-10-11 17:33:35,391 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-11 13:34:33] 2025-10-11 17:33:35,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838293282/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,394 | INFO     | extracted standard info from prmon json
[2025-10-11 13:34:33] 2025-10-11 17:33:35,394 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:34:33] 2025-10-11 17:33:35,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:34:33] 2025-10-11 17:33:35,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:34:33] 2025-10-11 17:33:35,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:34:33] 2025-10-11 17:33:35,397 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:34:33] 2025-10-11 17:33:35,397 | INFO     | sum of square deviations: 549294020.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,398 | INFO     | sum of deviations: -5575396950.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,398 | INFO     | mean x: 1760200305.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,398 | INFO     | mean y: 2574478.520661157
[2025-10-11 13:34:33] 2025-10-11 17:33:35,398 | INFO     | -- intersect: 17868808325.169983
[2025-10-11 13:34:33] 2025-10-11 17:33:35,399 | INFO     | intersect: 17868808325.169983
[2025-10-11 13:34:33] 2025-10-11 17:33:35,399 | INFO     | chi2: 1.54760769585772
[2025-10-11 13:34:33] 2025-10-11 17:33:35,399 | INFO     | sum of square deviations: 483971865.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,400 | INFO     | sum of deviations: -4773117416.500004
[2025-10-11 13:34:33] 2025-10-11 17:33:35,400 | INFO     | mean x: 1760200152.5
[2025-10-11 13:34:33] 2025-10-11 17:33:35,400 | INFO     | mean y: 2576352.5086206896
[2025-10-11 13:34:33] 2025-10-11 17:33:35,400 | INFO     | -- intersect: 17362349950.967106
[2025-10-11 13:34:33] 2025-10-11 17:33:35,400 | INFO     | intersect: 17362349950.967106
[2025-10-11 13:34:33] 2025-10-11 17:33:35,401 | INFO     | chi2: 1.5482801235512231
[2025-10-11 13:34:33] 2025-10-11 17:33:35,401 | INFO     | current chi2=1.5482801235512231 (change=-0.04344949274308104 %)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,401 | INFO     | right removable region: 115
[2025-10-11 13:34:33] 2025-10-11 17:33:35,401 | INFO     | sum of square deviations: 483971865.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,402 | INFO     | sum of deviations: -23572999332.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,402 | INFO     | mean x: 1760200457.5
[2025-10-11 13:34:33] 2025-10-11 17:33:35,402 | INFO     | mean y: 2615702.5862068967
[2025-10-11 13:34:33] 2025-10-11 17:33:35,402 | INFO     | -- intersect: 85737360239.51006
[2025-10-11 13:34:33] 2025-10-11 17:33:35,402 | INFO     | intersect: 85737360239.51006
[2025-10-11 13:34:33] 2025-10-11 17:33:35,403 | INFO     | chi2: 0.10712726443945961
[2025-10-11 13:34:33] 2025-10-11 17:33:35,403 | INFO     | current chi2=0.10712726443945961 (change=93.07787983180795 %)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,403 | INFO     | sum of square deviations: 424045160.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | sum of deviations: -21530462521.999996
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | mean x: 1760200610.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | mean y: 2610466.3603603602
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | -- intersect: 89375009540.09708
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | intersect: 89375009540.09708
[2025-10-11 13:34:33] 2025-10-11 17:33:35,404 | INFO     | chi2: 0.10456402438564127
[2025-10-11 13:34:33] 2025-10-11 17:33:35,405 | INFO     | current chi2=0.10456402438564127 (change=2.392705598551792 %)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,405 | INFO     | left removable region: 20
[2025-10-11 13:34:33] 2025-10-11 17:33:35,405 | INFO     | sum of square deviations: 265828240.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,405 | INFO     | sum of deviations: -14455399238.000002
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | mean x: 1760200732.0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | mean y: 2597018.294736842
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | -- intersect: 95720058489.20485
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | intersect: 95720058489.20485
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | chi2: 0.09644407435287743
[2025-10-11 13:34:33] 2025-10-11 17:33:35,406 | INFO     | -- intersect: 95720058489.20485
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | current memory leak: -54.38 B/s (using 95 data points, chi2=0.10)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | could have reported an average CPU frequency of 1935 MHz (8 samples)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | ..............................
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | . Timing measurements:
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | . get job = 0 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,407 | INFO     | . initial setup = 2 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | . payload setup = 8 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | . stage-in = 0 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | . payload execution = 7364 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | . stage-out = 0 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | . log creation = 0 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,408 | INFO     | ..............................
[2025-10-11 13:34:33] 2025-10-11 17:33:35,510 | INFO     | 
[2025-10-11 13:34:33] 2025-10-11 17:33:35,510 | INFO     | job summary report
[2025-10-11 13:34:33] 2025-10-11 17:33:35,510 | INFO     | --------------------------------------------------
[2025-10-11 13:34:33] 2025-10-11 17:33:35,510 | INFO     | PanDA job id: 6838293282
[2025-10-11 13:34:33] 2025-10-11 17:33:35,510 | INFO     | task id: 46676269
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | errors: (none)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | pilot state: finished 
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | transexitcode: 0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | exeerrorcode: 0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | exeerrordiag: 
[2025-10-11 13:34:33] 2025-10-11 17:33:35,511 | INFO     | exitcode: 0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | exitmsg: OK
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | cpuconsumptiontime: 55145 s
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | nevents: 400
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | neventsw: 0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | pid: 23705
[2025-10-11 13:34:33] 2025-10-11 17:33:35,512 | INFO     | pgrp: 23705
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | corecount: 8
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | event service: False
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | sizes: {0: 2348855, 6: 2349117, 11: 2349145, 7376: 2376506, 7378: 2385560, 7384: 2385698}
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | --------------------------------------------------
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | 
[2025-10-11 13:34:33] 2025-10-11 17:33:35,513 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 13:34:33] 2025-10-11 17:33:35,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:34:33] 2025-10-11 17:33:35,547 | INFO     | job 6838293282 has completed (purged errors)
[2025-10-11 13:34:33] 2025-10-11 17:33:35,547 | INFO     | overall cleanup function is called
[2025-10-11 13:34:33] 2025-10-11 17:33:36,555 | INFO     | --- collectZombieJob: --- 10, [23705]
[2025-10-11 13:34:33] 2025-10-11 17:33:36,555 | INFO     | zombie collector waiting for pid 23705
[2025-10-11 13:34:33] 2025-10-11 17:33:36,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:34:33] 2025-10-11 17:33:36,556 | INFO     | collected zombie processes
[2025-10-11 13:34:33] 2025-10-11 17:33:36,556 | INFO     | will attempt to kill all subprocesses of pid=23705
[2025-10-11 13:34:33] 2025-10-11 17:33:36,642 | INFO     | process IDs to be killed: [23705] (in reverse order)
[2025-10-11 13:34:33] 2025-10-11 17:33:36,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:34:33] 2025-10-11 17:33:36,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:34:33] 2025-10-11 17:33:36,702 | INFO     | did not find any defunct processes belonging to 23705
[2025-10-11 13:34:33] 2025-10-11 17:33:36,705 | INFO     | did not find any defunct processes belonging to 23705
[2025-10-11 13:34:33] 2025-10-11 17:33:36,706 | INFO     | ready for new job
[2025-10-11 13:34:33] 2025-10-11 17:33:36,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:34:33] 2025-10-11 17:33:36,708 | INFO     | ***************************************
[2025-10-11 13:34:33] 2025-10-11 17:33:36,708 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:34:33] 2025-10-11 17:33:36,708 | INFO     | ***************************************
[2025-10-11 13:34:33] 2025-10-11 17:33:36,709 | INFO     | 
[2025-10-11 13:34:33] 2025-10-11 17:33:36,709 | INFO     | architecture information:
[2025-10-11 13:34:33] 2025-10-11 17:33:36,710 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:34:33] 2025-10-11 17:33:36,728 | INFO     | cat /etc/os-release:
[2025-10-11 13:34:33] NAME="CentOS Linux"
[2025-10-11 13:34:33] VERSION="7 (Core)"
[2025-10-11 13:34:33] ID="centos"
[2025-10-11 13:34:33] ID_LIKE="rhel fedora"
[2025-10-11 13:34:33] VERSION_ID="7"
[2025-10-11 13:34:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:34:33] ANSI_COLOR="0;31"
[2025-10-11 13:34:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:34:33] HOME_URL="https://www.centos.org/"
[2025-10-11 13:34:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:34:33] 
[2025-10-11 13:34:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:34:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:34:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:34:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:34:33] 
[2025-10-11 13:34:33] 2025-10-11 17:33:36,729 | INFO     | ***************************************
[2025-10-11 13:34:33] 2025-10-11 17:33:37,232 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 13:34:33] 2025-10-11 17:33:37,251 | INFO     | sufficient remaining disk space (18547212288 B)
[2025-10-11 13:34:33] 2025-10-11 17:33:37,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:34:33] 2025-10-11 17:33:37,252 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:34:33] 2025-10-11 17:33:37,252 | INFO     | update_server=False
[2025-10-11 13:34:33] 2025-10-11 17:33:37,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:34:33] 2025-10-11 17:33:37,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 13:34:33] 2025-10-11 17:33:37,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:34:33] 2025-10-11 17:33:37,254 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:34:33] 2025-10-11 17:33:37,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:34:33] 2025-10-11 17:33:37,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:34:33] 2025-10-11 17:33:37,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:34:33] 2025-10-11 17:33:37,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:34:33] 2025-10-11 17:33:37,756 | INFO     | aborting loop
[2025-10-11 13:34:33] 2025-10-11 17:33:38,242 | INFO     | all data control threads have been joined
[2025-10-11 13:34:33] 2025-10-11 17:33:38,258 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,259 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,334 | INFO     | all payload control threads have been joined
[2025-10-11 13:34:33] 2025-10-11 17:33:38,520 | INFO     | all job control threads have been joined
[2025-10-11 13:34:33] 2025-10-11 17:33:38,566 | INFO     | [job] validate thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,724 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,761 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,883 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:38,894 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,248 | INFO     | [data] control thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,253 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,341 | INFO     | [payload] control thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,505 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,521 | INFO     | [job] control thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,696 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:39,796 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:33:40,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:34:33] 2025-10-11 17:33:44,303 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:34:33] 2025-10-11 17:34:25,961 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:34:33] 2025-10-11 17:34:27,928 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720614459200)>', '<ExcThread(monitor, started 139720025687808)>']
[2025-10-11 13:34:33] 2025-10-11 17:34:28,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:34:33] 2025-10-11 17:34:28,489 | INFO     | [monitor] control thread has ended
[2025-10-11 13:34:33] 2025-10-11 17:34:32,954 | INFO     | all workflow threads have been joined
[2025-10-11 13:34:33] 2025-10-11 17:34:32,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:34:33] 2025-10-11 17:34:32,956 | INFO     | traces error code: 0
[2025-10-11 13:34:33] 2025-10-11 17:34:32,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:34:33] 2025-10-11 17:34:33,088 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:34:33] 2025-10-11 17:34:33,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:34:33] 2025-10-11 17:34:33,097 [wrapper] pilotpid: 17273
[2025-10-11 13:34:33] 2025-10-11 17:34:33,102 [wrapper] Pilot exit status: 0
[2025-10-11 13:34:33] 2025-10-11 17:34:33,122 [wrapper] pandaids: 6838293282
[2025-10-11 13:34:33] 2025-10-11 17:34:33,167 [wrapper] cleanup supervisor_pilot 23538 17274
[2025-10-11 13:34:33] 2025-10-11 17:34:33,172 [wrapper] Test setup, not cleaning
[2025-10-11 13:34:33] 2025-10-11 17:34:33,177 [wrapper] apfmon messages muted
[2025-10-11 13:34:33] 2025-10-11 17:34:33,181 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:34:33] 2025-10-11 17:34:33,186 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:34:33]  *** Error codes and diagnostics ***
[2025-10-11 13:34:33]     "exeErrorCode": 0,
[2025-10-11 13:34:33]     "exeErrorDiag": "",
[2025-10-11 13:34:33]     "pilotErrorCode": 0,
[2025-10-11 13:34:33]     "pilotErrorDiag": "",
[2025-10-11 13:34:33]  *** Listing of results directory ***
[2025-10-11 13:34:33] total 418404
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 05:19 pilot3.tar.gz
[2025-10-11 13:34:33] -rwx------ 1 boincer umatlas     36292 Oct 11 05:23 runpilot2-wrapper.sh
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 05:23 queuedata.json
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas       100 Oct 11 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:34:33] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 11:29 run_atlas
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas       105 Oct 11 11:29 job.xml
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas 224191996 Oct 11 11:29 EVNT.46676267._002215.pool.root.1
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 11:29 start_atlas.sh
[2025-10-11 13:34:33] drwxrwx--x 2 boincer umatlas      4096 Oct 11 11:29 shared
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 11:29 input.tar.gz
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas         0 Oct 11 11:29 boinc_lockfile
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 11:29 pandaJob.out
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas    975512 Oct 11 11:30 agis_schedconf.cvmfs.json
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas   1560580 Oct 11 11:30 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:34:33] drwx------ 5 boincer umatlas      4096 Oct 11 11:30 pilot3
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 13:29 init_data.xml
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas 197558803 Oct 11 13:32 HITS.46676269._055230.pool.root.1
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas       529 Oct 11 13:32 boinc_task_state.xml
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas        95 Oct 11 13:32 pilot_heartbeat.json
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas      1050 Oct 11 13:33 memory_monitor_summary.json
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas    353024 Oct 11 13:33 log.46676269._055230.job.log.tgz.1
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas      7850 Oct 11 13:33 heartbeat.json
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas        27 Oct 11 13:34 wrapper_checkpoint.txt
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 13:34 boinc_mmap_file
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas      4552 Oct 11 13:34 pilotlog.txt
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas   1043969 Oct 11 13:34 log.46676269._055230.job.log.1
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas       357 Oct 11 13:34 output.list
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas       620 Oct 11 13:34 runtime_log
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas   1413120 Oct 11 13:34 result.tar.gz
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas       659 Oct 11 13:34 Uj6NDm2zkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh3fNDmuFMuQm.diag
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 13:34 runtime_log.err
[2025-10-11 13:34:33] -rw-r--r-- 1 boincer umatlas     21001 Oct 11 13:34 stderr.txt
[2025-10-11 13:34:33] HITS file was successfully produced:
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas 197558803 Oct 11 13:32 shared/HITS.pool.root.1
[2025-10-11 13:34:33]  *** Contents of shared directory: ***
[2025-10-11 13:34:33] total 413832
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas 224191996 Oct 11 11:29 ATLAS.root_0
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 11:29 start_atlas.sh
[2025-10-11 13:34:33] -rw-r--r-- 2 boincer umatlas    569675 Oct 11 11:29 input.tar.gz
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas 197558803 Oct 11 13:32 HITS.pool.root.1
[2025-10-11 13:34:33] -rw------- 1 boincer umatlas   1413120 Oct 11 13:34 result.tar.gz
13:34:34 (13413): run_atlas exited; CPU time 55098.787482
13:34:34 (13413): called boinc_finish(0)

</stderr_txt>
]]>

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