Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:42 (1863825): wrapper (7.7.26015): starting
17:04:42 (1863825): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 17:04:42] Arguments: --nthreads 8
[2025-10-11 17:04:42] Threads: 8
[2025-10-11 17:04:42] Checking for CVMFS
[2025-10-11 17:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 17:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 17:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 17:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 17:04:43] 2.13.2.0 129212 115052 132024 151595 0 331 22769522 39288832 7403 16776704 1 62112304 99.666 54909963 36687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 17:04:43] CVMFS is ok
[2025-10-11 17:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:04:43] Further information can be found at the LHC@home message board.
[2025-10-11 17:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:04:43] Checking for apptainer binary...
[2025-10-11 17:04:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 17:04:43] Running /usr/bin/apptainer --version
[2025-10-11 17:04:43] apptainer version 1.4.3-1.el9
[2025-10-11 17:04:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:04:43] c-211-16.aglt2.org
[2025-10-11 17:04:43] apptainer works
[2025-10-11 17:04:43] Set ATHENA_PROC_NUMBER=8
[2025-10-11 17:04:43] Set ATHENA_CORE_NUMBER=8
[2025-10-11 17:04:43] Starting ATLAS job with PandaID=6838363537
[2025-10-11 17:04:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:59:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:59:40] 2025-10-12 02:58:42,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:59:40] 2025-10-12 02:58:42,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:59:40] 2025-10-12 02:58:42,439 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:59:40] 2025-10-12 02:58:42,440 | INFO     | sum of square deviations: 13067528942.609207
[2025-10-11 22:59:40] 2025-10-12 02:58:42,444 | INFO     | sum of deviations: 39994379388.17822
[2025-10-11 22:59:40] 2025-10-12 02:58:42,444 | INFO     | mean x: 1760227310.0632184
[2025-10-11 22:59:40] 2025-10-12 02:58:42,444 | INFO     | mean y: 2561264.5373563217
[2025-10-11 22:59:40] 2025-10-12 02:58:42,445 | INFO     | -- intersect: -5384777011.680312
[2025-10-11 22:59:40] 2025-10-12 02:58:42,445 | INFO     | intersect: -5384777011.680312
[2025-10-11 22:59:40] 2025-10-12 02:58:42,445 | INFO     | chi2: 2.0517347912298574
[2025-10-11 22:59:40] 2025-10-12 02:58:42,446 | INFO     | sum of square deviations: 12512338722.13993
[2025-10-11 22:59:40] 2025-10-12 02:58:42,449 | INFO     | sum of deviations: 61487266606.44318
[2025-10-11 22:59:40] 2025-10-12 02:58:42,450 | INFO     | mean x: 1760227157.5685132
[2025-10-11 22:59:40] 2025-10-12 02:58:42,450 | INFO     | mean y: 2567096.300291545
[2025-10-11 22:59:40] 2025-10-12 02:58:42,450 | INFO     | -- intersect: -8647419043.685413
[2025-10-11 22:59:40] 2025-10-12 02:58:42,450 | INFO     | intersect: -8647419043.685413
[2025-10-11 22:59:40] 2025-10-12 02:58:42,451 | INFO     | chi2: 1.364572025732228
[2025-10-11 22:59:40] 2025-10-12 02:58:42,451 | INFO     | current chi2=1.364572025732228 (change=33.491792820149435 %)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,452 | INFO     | sum of square deviations: 11973122968.00003
[2025-10-11 22:59:40] 2025-10-12 02:58:42,456 | INFO     | sum of deviations: 60240664363.692276
[2025-10-11 22:59:40] 2025-10-12 02:58:42,456 | INFO     | mean x: 1760227005.0769231
[2025-10-11 22:59:40] 2025-10-12 02:58:42,456 | INFO     | mean y: 2566743.8579881657
[2025-10-11 22:59:40] 2025-10-12 02:58:42,456 | INFO     | -- intersect: -8853706135.001324
[2025-10-11 22:59:40] 2025-10-12 02:58:42,456 | INFO     | intersect: -8853706135.001324
[2025-10-11 22:59:40] 2025-10-12 02:58:42,457 | INFO     | chi2: 1.364817606416775
[2025-10-11 22:59:40] 2025-10-12 02:58:42,457 | INFO     | current chi2=1.364817606416775 (change=-0.017996901586426983 %)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,457 | INFO     | right removable region: 337
[2025-10-11 22:59:40] 2025-10-12 02:58:42,458 | INFO     | sum of square deviations: 12512240146.000023
[2025-10-11 22:59:40] 2025-10-12 02:58:42,462 | INFO     | sum of deviations: -5370610962.571434
[2025-10-11 22:59:40] 2025-10-12 02:58:42,462 | INFO     | mean x: 1760227462.5714285
[2025-10-11 22:59:40] 2025-10-12 02:58:42,462 | INFO     | mean y: 2573622.921282799
[2025-10-11 22:59:40] 2025-10-12 02:58:42,462 | INFO     | -- intersect: 758113541.9762695
[2025-10-11 22:59:40] 2025-10-12 02:58:42,462 | INFO     | intersect: 758113541.9762695
[2025-10-11 22:59:40] 2025-10-12 02:58:42,463 | INFO     | chi2: 0.8257158508764584
[2025-10-11 22:59:40] 2025-10-12 02:58:42,463 | INFO     | current chi2=0.8257158508764584 (change=59.75523472107693 %)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,464 | INFO     | sum of square deviations: 11973093193.04141
[2025-10-11 22:59:40] 2025-10-12 02:58:42,468 | INFO     | sum of deviations: 9762243641.562096
[2025-10-11 22:59:40] 2025-10-12 02:58:42,468 | INFO     | mean x: 1760227615.0532544
[2025-10-11 22:59:40] 2025-10-12 02:58:42,468 | INFO     | mean y: 2569340.079881657
[2025-10-11 22:59:40] 2025-10-12 02:58:42,468 | INFO     | -- intersect: -1432629615.2529478
[2025-10-11 22:59:40] 2025-10-12 02:58:42,468 | INFO     | intersect: -1432629615.2529478
[2025-10-11 22:59:40] 2025-10-12 02:58:42,469 | INFO     | chi2: 0.7564579134974426
[2025-10-11 22:59:40] 2025-10-12 02:58:42,469 | INFO     | current chi2=0.7564579134974426 (change=8.387623576016098 %)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,469 | INFO     | left removable region: 20
[2025-10-11 22:59:40] 2025-10-12 02:58:42,470 | INFO     | sum of square deviations: 9877335732.49213
[2025-10-11 22:59:40] 2025-10-12 02:58:42,473 | INFO     | sum of deviations: 28422877280.589886
[2025-10-11 22:59:40] 2025-10-12 02:58:42,474 | INFO     | mean x: 1760227584.5488958
[2025-10-11 22:59:40] 2025-10-12 02:58:42,474 | INFO     | mean y: 2575797.542586751
[2025-10-11 22:59:40] 2025-10-12 02:58:42,474 | INFO     | -- intersect: -5062629433.556638
[2025-10-11 22:59:40] 2025-10-12 02:58:42,474 | INFO     | intersect: -5062629433.556638
[2025-10-11 22:59:40] 2025-10-12 02:58:42,475 | INFO     | chi2: 0.015403769343493693
[2025-10-11 22:59:40] 2025-10-12 02:58:42,475 | INFO     | -- intersect: -5062629433.556638
[2025-10-11 22:59:40] 2025-10-12 02:58:42,475 | INFO     | current memory leak: 2.88 B/s (using 317 data points, chi2=0.02)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,476 | INFO     | could have reported an average CPU frequency of 2604 MHz (15 samples)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,476 | INFO     | ..............................
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . Timing measurements:
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . get job = 0 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . initial setup = 3 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . payload setup = 7 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . stage-in = 0 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . payload execution = 21187 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . stage-out = 2 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | . log creation = 0 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,477 | INFO     | ..............................
[2025-10-11 22:59:40] 2025-10-12 02:58:42,604 | INFO     | 
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | job summary report
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | --------------------------------------------------
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | PanDA job id: 6838363537
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | task id: 46676269
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | errors: (none)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | pilot state: finished 
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | transexitcode: 0
[2025-10-11 22:59:40] 2025-10-12 02:58:42,605 | INFO     | exeerrorcode: 0
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | exeerrordiag: 
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | exitcode: 0
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | exitmsg: OK
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | cpuconsumptiontime: 55745 s
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | nevents: 400
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | neventsw: 0
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | pid: 1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | pgrp: 1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | corecount: 8
[2025-10-11 22:59:40] 2025-10-12 02:58:42,606 | INFO     | event service: False
[2025-10-11 22:59:40] 2025-10-12 02:58:42,607 | INFO     | sizes: {0: 2348630, 1: 2348885, 6: 2349147, 12: 2349175, 21197: 2383128, 21198: 2383127, 21201: 2392309, 21202: 2392365, 21208: 2392559}
[2025-10-11 22:59:40] 2025-10-12 02:58:42,607 | INFO     | --------------------------------------------------
[2025-10-11 22:59:40] 2025-10-12 02:58:42,607 | INFO     | 
[2025-10-11 22:59:40] 2025-10-12 02:58:42,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 22:59:40] 2025-10-12 02:58:42,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:59:40] 2025-10-12 02:58:42,630 | INFO     | job 6838363537 has completed (purged errors)
[2025-10-11 22:59:40] 2025-10-12 02:58:42,631 | INFO     | overall cleanup function is called
[2025-10-11 22:59:40] 2025-10-12 02:58:43,639 | INFO     | --- collectZombieJob: --- 10, [1876030]
[2025-10-11 22:59:40] 2025-10-12 02:58:43,640 | INFO     | zombie collector waiting for pid 1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:43,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:59:40] 2025-10-12 02:58:43,640 | INFO     | collected zombie processes
[2025-10-11 22:59:40] 2025-10-12 02:58:43,640 | INFO     | will attempt to kill all subprocesses of pid=1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:43,859 | INFO     | process IDs to be killed: [1876030] (in reverse order)
[2025-10-11 22:59:40] 2025-10-12 02:58:43,934 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:59:40] 2025-10-12 02:58:43,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:59:40] 2025-10-12 02:58:43,943 | INFO     | did not find any defunct processes belonging to 1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:43,950 | INFO     | did not find any defunct processes belonging to 1876030
[2025-10-11 22:59:40] 2025-10-12 02:58:43,951 | INFO     | ready for new job
[2025-10-11 22:59:40] 2025-10-12 02:58:43,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:59:40] 2025-10-12 02:58:43,954 | INFO     | ***************************************
[2025-10-11 22:59:40] 2025-10-12 02:58:43,955 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:59:40] 2025-10-12 02:58:43,955 | INFO     | ***************************************
[2025-10-11 22:59:40] 2025-10-12 02:58:43,955 | INFO     | 
[2025-10-11 22:59:40] 2025-10-12 02:58:43,957 | INFO     | architecture information:
[2025-10-11 22:59:40] 2025-10-12 02:58:43,958 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:59:40] 2025-10-12 02:58:43,976 | INFO     | cat /etc/os-release:
[2025-10-11 22:59:40] NAME="CentOS Linux"
[2025-10-11 22:59:40] VERSION="7 (Core)"
[2025-10-11 22:59:40] ID="centos"
[2025-10-11 22:59:40] ID_LIKE="rhel fedora"
[2025-10-11 22:59:40] VERSION_ID="7"
[2025-10-11 22:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:59:40] ANSI_COLOR="0;31"
[2025-10-11 22:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:59:40] HOME_URL="https://www.centos.org/"
[2025-10-11 22:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:59:40] 
[2025-10-11 22:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:59:40] 
[2025-10-11 22:59:40] 2025-10-12 02:58:43,977 | INFO     | ***************************************
[2025-10-11 22:59:40] 2025-10-12 02:58:44,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 22:59:40] 2025-10-12 02:58:44,498 | INFO     | sufficient remaining disk space (52909047808 B)
[2025-10-11 22:59:40] 2025-10-12 02:58:44,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:59:40] 2025-10-12 02:58:44,499 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:59:40] 2025-10-12 02:58:44,499 | INFO     | update_server=False
[2025-10-11 22:59:40] 2025-10-12 02:58:44,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:59:40] 2025-10-12 02:58:44,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:59:40] 2025-10-12 02:58:44,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:59:40] 2025-10-12 02:58:44,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:59:40] 2025-10-12 02:58:44,500 | INFO     | aborting loop
[2025-10-11 22:59:40] 2025-10-12 02:58:44,567 | INFO     | all data control threads have been joined
[2025-10-11 22:59:40] 2025-10-12 02:58:44,707 | INFO     | all job control threads have been joined
[2025-10-11 22:59:40] 2025-10-12 02:58:45,505 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,506 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,506 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,572 | INFO     | [data] control thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,690 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,712 | INFO     | [job] control thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:45,916 | INFO     | all payload control threads have been joined
[2025-10-11 22:59:40] 2025-10-12 02:58:45,973 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,090 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,178 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,238 | INFO     | [job] validate thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,372 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,505 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:59:40] 2025-10-12 02:58:46,583 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:46,921 | INFO     | [payload] control thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:50,581 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:58:54,767 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:59:40] 2025-10-12 02:58:55,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:59:40] 2025-10-12 02:59:14,877 | INFO     | PID=1867548 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:59:40] 2025-10-12 02:59:14,877 | INFO     | .. there are 7 such processes running
[2025-10-11 22:59:40] 2025-10-12 02:59:14,877 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:59:40] 2025-10-12 02:59:14,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:59:40] 2025-10-12 02:59:14,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:59:40] 2025-10-12 02:59:33,994 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:59:40] 2025-10-12 02:59:34,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941781804864)>', '<ExcThread(monitor, started 139941275219712)>']
[2025-10-11 22:59:40] 2025-10-12 02:59:35,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:59:40] 2025-10-12 02:59:35,979 | INFO     | [monitor] control thread has ended
[2025-10-11 22:59:40] 2025-10-12 02:59:40,025 | INFO     | all workflow threads have been joined
[2025-10-11 22:59:40] 2025-10-12 02:59:40,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:59:40] 2025-10-12 02:59:40,026 | INFO     | traces error code: 0
[2025-10-11 22:59:40] 2025-10-12 02:59:40,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:59:40] 2025-10-12 02:59:40,259 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:59:40] 2025-10-12 02:59:40,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:59:40] 2025-10-12 02:59:40,268 [wrapper] pilotpid: 1867548
[2025-10-11 22:59:40] 2025-10-12 02:59:40,272 [wrapper] Pilot exit status: 0
[2025-10-11 22:59:40] 2025-10-12 02:59:40,287 [wrapper] pandaids: 6838363537
[2025-10-11 22:59:40] 2025-10-12 02:59:40,340 [wrapper] cleanup supervisor_pilot 2352533 1867549
[2025-10-11 22:59:40] 2025-10-12 02:59:40,344 [wrapper] Test setup, not cleaning
[2025-10-11 22:59:40] 2025-10-12 02:59:40,348 [wrapper] apfmon messages muted
[2025-10-11 22:59:40] 2025-10-12 02:59:40,352 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:59:40] 2025-10-12 02:59:40,356 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:59:40]  *** Error codes and diagnostics ***
[2025-10-11 22:59:40]     "exeErrorCode": 0,
[2025-10-11 22:59:40]     "exeErrorDiag": "",
[2025-10-11 22:59:40]     "pilotErrorCode": 0,
[2025-10-11 22:59:40]     "pilotErrorDiag": "",
[2025-10-11 22:59:40]  *** Listing of results directory ***
[2025-10-11 22:59:40] total 413260
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 06:16 pilot3.tar.gz
[2025-10-11 22:59:40] -rwx------. 1 boincer umatlas     36292 Oct 11 06:21 runpilot2-wrapper.sh
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 06:21 queuedata.json
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas       100 Oct 11 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:59:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 17:04 run_atlas
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas       105 Oct 11 17:04 job.xml
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas 221468380 Oct 11 17:04 EVNT.46676267._002254.pool.root.1
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 22:59:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 17:04 shared
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 17:04 input.tar.gz
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas         0 Oct 11 17:04 boinc_lockfile
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 17:04 pandaJob.out
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas    975528 Oct 11 17:04 agis_schedconf.cvmfs.json
[2025-10-11 22:59:40] drwx------. 5 boincer umatlas      4096 Oct 11 17:04 pilot3
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 22:56 init_data.xml
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas 190996803 Oct 11 22:57 HITS.46676269._056080.pool.root.1
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas       531 Oct 11 22:57 boinc_task_state.xml
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas      1043 Oct 11 22:58 memory_monitor_summary.json
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas        95 Oct 11 22:58 pilot_heartbeat.json
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas    582258 Oct 11 22:58 log.46676269._056080.job.log.tgz.1
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas      7825 Oct 11 22:58 heartbeat.json
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas        28 Oct 11 22:59 wrapper_checkpoint.txt
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:59 boinc_mmap_file
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas      4895 Oct 11 22:59 pilotlog.txt
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas   2823585 Oct 11 22:59 log.46676269._056080.job.log.1
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas       357 Oct 11 22:59 output.list
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:59 runtime_log
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas   3420160 Oct 11 22:59 result.tar.gz
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 22:59 runtime_log.err
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas       656 Oct 11 22:59 ne3KDm3tlR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlgRMDmKCYOWn.diag
[2025-10-11 22:59:40] -rw-r--r--. 1 boincer umatlas     20994 Oct 11 22:59 stderr.txt
[2025-10-11 22:59:40] HITS file was successfully produced:
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas 190996803 Oct 11 22:57 shared/HITS.pool.root.1
[2025-10-11 22:59:40]  *** Contents of shared directory: ***
[2025-10-11 22:59:40] total 406724
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas 221468380 Oct 11 17:04 ATLAS.root_0
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 17:04 start_atlas.sh
[2025-10-11 22:59:40] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 17:04 input.tar.gz
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas 190996803 Oct 11 22:57 HITS.pool.root.1
[2025-10-11 22:59:40] -rw-------. 1 boincer umatlas   3420160 Oct 11 22:59 result.tar.gz
22:59:42 (1863825): run_atlas exited; CPU time 56011.846387
22:59:42 (1863825): called boinc_finish(0)

</stderr_txt>
]]>

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