Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:58 (8037): wrapper (7.7.26015): starting
10:58:58 (8037): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:58:58] Arguments: --nthreads 8
[2025-10-11 10:58:58] Threads: 8
[2025-10-11 10:58:58] Checking for CVMFS
[2025-10-11 10:58:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:58:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:58:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:58:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:58:58] 2.11.2.0 2765 1157 66784 151587 1 59 11439733 20275200 1 130560 0 841363 99.991 37233 35939 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:58:58] CVMFS is ok
[2025-10-11 10:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:58:58] Further information can be found at the LHC@home message board.
[2025-10-11 10:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:58:58] Checking for apptainer binary...
[2025-10-11 10:58:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:58:58] Running /usr/bin/apptainer --version
[2025-10-11 10:58:58] apptainer version 1.3.2-1.el7
[2025-10-11 10:58:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:59:00] c-204-21.aglt2.org
[2025-10-11 10:59:00] apptainer works
[2025-10-11 10:59:00] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:59:00] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:59:00] Starting ATLAS job with PandaID=6838451009
[2025-10-11 10:59:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:05:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:05:36] 2025-10-11 17:04:31,184 | INFO     | -- intersect: -33681304809.65987
[2025-10-11 13:05:36] 2025-10-11 17:04:31,184 | INFO     | intersect: -33681304809.65987
[2025-10-11 13:05:36] 2025-10-11 17:04:31,184 | INFO     | chi2: 1.4592314301281089
[2025-10-11 13:05:36] 2025-10-11 17:04:31,184 | INFO     | current chi2=1.4592314301281089 (change=-0.1486198600627345 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,184 | INFO     | right removable region: 117
[2025-10-11 13:05:36] 2025-10-11 17:04:31,185 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 13:05:36] 2025-10-11 17:04:31,185 | INFO     | sum of deviations: -7322536624.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,185 | INFO     | mean x: 1760198662.5
[2025-10-11 13:05:36] 2025-10-11 17:04:31,186 | INFO     | mean y: 2552504.6440677964
[2025-10-11 13:05:36] 2025-10-11 17:04:31,186 | INFO     | -- intersect: 25303103814.28704
[2025-10-11 13:05:36] 2025-10-11 17:04:31,186 | INFO     | intersect: 25303103814.28704
[2025-10-11 13:05:36] 2025-10-11 17:04:31,186 | INFO     | chi2: 0.07517054699460798
[2025-10-11 13:05:36] 2025-10-11 17:04:31,186 | INFO     | current chi2=0.07517054699460798 (change=94.8409646474137 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,187 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,187 | INFO     | sum of deviations: -3760688063.999999
[2025-10-11 13:05:36] 2025-10-11 17:04:31,187 | INFO     | mean x: 1760198815.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,187 | INFO     | mean y: 2543726.9557522126
[2025-10-11 13:05:36] 2025-10-11 17:04:31,188 | INFO     | -- intersect: 14798713114.8837
[2025-10-11 13:05:36] 2025-10-11 17:04:31,188 | INFO     | intersect: 14798713114.8837
[2025-10-11 13:05:36] 2025-10-11 17:04:31,188 | INFO     | chi2: 0.05617611120456933
[2025-10-11 13:05:36] 2025-10-11 17:04:31,188 | INFO     | current chi2=0.05617611120456933 (change=25.268454932755958 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,188 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | sum of deviations: 476397800.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | mean x: 1760198967.5
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | mean y: 2532335.2592592593
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | -- intersect: -2144403445.8662531
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | intersect: -2144403445.8662531
[2025-10-11 13:05:36] 2025-10-11 17:04:31,189 | INFO     | chi2: 0.013219609249141047
[2025-10-11 13:05:36] 2025-10-11 17:04:31,190 | INFO     | current chi2=0.013219609249141047 (change=76.46756073769347 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,190 | INFO     | sum of square deviations: 338804492.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,190 | INFO     | sum of deviations: 1119154555.9999998
[2025-10-11 13:05:36] 2025-10-11 17:04:31,190 | INFO     | mean x: 1760199120.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | mean y: 2530545.300970874
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | -- intersect: -5811840016.867344
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | intersect: -5811840016.867344
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | chi2: 0.00021609853851264568
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | current chi2=0.00021609853851264568 (change=98.36531825986697 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,191 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 13:05:36] 2025-10-11 17:04:31,192 | INFO     | sum of deviations: 929692582.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,192 | INFO     | mean x: 1760199272.5
[2025-10-11 13:05:36] 2025-10-11 17:04:31,192 | INFO     | mean y: 2531160.4897959186
[2025-10-11 13:05:36] 2025-10-11 17:04:31,192 | INFO     | -- intersect: -5605233434.7940035
[2025-10-11 13:05:36] 2025-10-11 17:04:31,192 | INFO     | intersect: -5605233434.7940035
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | chi2: 0.00021154383881440074
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | current chi2=0.00021154383881440074 (change=2.107695743614854 %)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | left removable region: 50
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | sum of square deviations: 93240818.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | sum of deviations: 185881151.99999994
[2025-10-11 13:05:36] 2025-10-11 17:04:31,193 | INFO     | mean x: 1760199852.0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | mean y: 2533268.3283582088
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | -- intersect: -3506530500.717398
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | intersect: -3506530500.717398
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | chi2: 3.183235858331691e-05
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | -- intersect: -3506530500.717398
[2025-10-11 13:05:36] 2025-10-11 17:04:31,194 | INFO     | current memory leak: 1.99 B/s (using 67 data points, chi2=0.00)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | could have reported an average CPU frequency of 1955 MHz (8 samples)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | ..............................
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | . Timing measurements:
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | . get job = 0 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | . initial setup = 2 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | . payload setup = 8 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,195 | INFO     | . stage-in = 0 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,196 | INFO     | . payload execution = 7476 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,196 | INFO     | . stage-out = 0 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,196 | INFO     | . log creation = 0 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,196 | INFO     | ..............................
[2025-10-11 13:05:36] 2025-10-11 17:04:31,288 | INFO     | 
[2025-10-11 13:05:36] 2025-10-11 17:04:31,289 | INFO     | job summary report
[2025-10-11 13:05:36] 2025-10-11 17:04:31,289 | INFO     | --------------------------------------------------
[2025-10-11 13:05:36] 2025-10-11 17:04:31,289 | INFO     | PanDA job id: 6838451009
[2025-10-11 13:05:36] 2025-10-11 17:04:31,289 | INFO     | task id: 46676269
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | errors: (none)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | pilot state: finished 
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | transexitcode: 0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | exeerrorcode: 0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,290 | INFO     | exeerrordiag: 
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | exitcode: 0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | exitmsg: OK
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | cpuconsumptiontime: 55641 s
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | nevents: 400
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | neventsw: 0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,291 | INFO     | pid: 18630
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | pgrp: 18630
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | corecount: 8
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | event service: False
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | sizes: {0: 2348685, 1: 2348884, 7: 2349146, 12: 2349174, 7488: 2376564, 7489: 2385562, 7491: 2385746, 7496: 2385940}
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | --------------------------------------------------
[2025-10-11 13:05:36] 2025-10-11 17:04:31,292 | INFO     | 
[2025-10-11 13:05:36] 2025-10-11 17:04:31,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:05:36] 2025-10-11 17:04:31,325 | INFO     | job 6838451009 has completed (purged errors)
[2025-10-11 13:05:36] 2025-10-11 17:04:31,326 | INFO     | overall cleanup function is called
[2025-10-11 13:05:36] 2025-10-11 17:04:32,333 | INFO     | --- collectZombieJob: --- 10, [18630]
[2025-10-11 13:05:36] 2025-10-11 17:04:32,333 | INFO     | zombie collector waiting for pid 18630
[2025-10-11 13:05:36] 2025-10-11 17:04:32,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:05:36] 2025-10-11 17:04:32,334 | INFO     | collected zombie processes
[2025-10-11 13:05:36] 2025-10-11 17:04:32,334 | INFO     | will attempt to kill all subprocesses of pid=18630
[2025-10-11 13:05:36] 2025-10-11 17:04:32,424 | INFO     | process IDs to be killed: [18630] (in reverse order)
[2025-10-11 13:05:36] 2025-10-11 17:04:32,484 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:05:36] 2025-10-11 17:04:32,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:05:36] 2025-10-11 17:04:32,488 | INFO     | did not find any defunct processes belonging to 18630
[2025-10-11 13:05:36] 2025-10-11 17:04:32,491 | INFO     | did not find any defunct processes belonging to 18630
[2025-10-11 13:05:36] 2025-10-11 17:04:32,491 | INFO     | ready for new job
[2025-10-11 13:05:36] 2025-10-11 17:04:32,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:05:36] 2025-10-11 17:04:32,493 | INFO     | ***************************************
[2025-10-11 13:05:36] 2025-10-11 17:04:32,493 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:05:36] 2025-10-11 17:04:32,493 | INFO     | ***************************************
[2025-10-11 13:05:36] 2025-10-11 17:04:32,493 | INFO     | 
[2025-10-11 13:05:36] 2025-10-11 17:04:32,493 | INFO     | architecture information:
[2025-10-11 13:05:36] 2025-10-11 17:04:32,494 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:05:36] 2025-10-11 17:04:32,512 | INFO     | cat /etc/os-release:
[2025-10-11 13:05:36] NAME="CentOS Linux"
[2025-10-11 13:05:36] VERSION="7 (Core)"
[2025-10-11 13:05:36] ID="centos"
[2025-10-11 13:05:36] ID_LIKE="rhel fedora"
[2025-10-11 13:05:36] VERSION_ID="7"
[2025-10-11 13:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:05:36] ANSI_COLOR="0;31"
[2025-10-11 13:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:05:36] HOME_URL="https://www.centos.org/"
[2025-10-11 13:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:05:36] 
[2025-10-11 13:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:05:36] 
[2025-10-11 13:05:36] 2025-10-11 17:04:32,512 | INFO     | ***************************************
[2025-10-11 13:05:36] 2025-10-11 17:04:33,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 13:05:36] 2025-10-11 17:04:33,036 | INFO     | sufficient remaining disk space (18538823680 B)
[2025-10-11 13:05:36] 2025-10-11 17:04:33,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:05:36] 2025-10-11 17:04:33,037 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:05:36] 2025-10-11 17:04:33,037 | INFO     | update_server=False
[2025-10-11 13:05:36] 2025-10-11 17:04:33,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:05:36] 2025-10-11 17:04:33,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:05:36] 2025-10-11 17:04:33,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:05:36] 2025-10-11 17:04:33,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:05:36] 2025-10-11 17:04:33,411 | INFO     | aborting loop
[2025-10-11 13:05:36] 2025-10-11 17:04:33,753 | INFO     | all data control threads have been joined
[2025-10-11 13:05:36] 2025-10-11 17:04:34,043 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:34,044 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:34,100 | INFO     | all payload control threads have been joined
[2025-10-11 13:05:36] 2025-10-11 17:04:34,192 | INFO     | all job control threads have been joined
[2025-10-11 13:05:36] 2025-10-11 17:04:34,417 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:34,627 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:34,659 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:34,759 | INFO     | [data] control thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,044 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,105 | INFO     | [payload] control thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,166 | INFO     | [job] validate thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,197 | INFO     | [job] control thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,359 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,366 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,538 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:35,539 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:04:36,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:05:36] 2025-10-11 17:04:40,064 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:05:36] 2025-10-11 17:05:03,605 | INFO     | PID=11848 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 13:05:36] 2025-10-11 17:05:03,605 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:05:36] 2025-10-11 17:05:03,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:05:36] 2025-10-11 17:05:03,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:05:36] 2025-10-11 17:05:29,803 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:05:36] 2025-10-11 17:05:30,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854556243776)>', '<ExcThread(monitor, started 139853966587648)>']
[2025-10-11 13:05:36] 2025-10-11 17:05:31,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:05:36] 2025-10-11 17:05:31,737 | INFO     | [monitor] control thread has ended
[2025-10-11 13:05:36] 2025-10-11 17:05:35,834 | INFO     | all workflow threads have been joined
[2025-10-11 13:05:36] 2025-10-11 17:05:35,835 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:05:36] 2025-10-11 17:05:35,835 | INFO     | traces error code: 0
[2025-10-11 13:05:36] 2025-10-11 17:05:35,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:05:36] 2025-10-11 17:05:35,944 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:05:36] 2025-10-11 17:05:35,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:05:36] 2025-10-11 17:05:35,953 [wrapper] pilotpid: 11848
[2025-10-11 13:05:36] 2025-10-11 17:05:35,958 [wrapper] Pilot exit status: 0
[2025-10-11 13:05:36] 2025-10-11 17:05:35,977 [wrapper] pandaids: 6838451009
[2025-10-11 13:05:36] 2025-10-11 17:05:36,023 [wrapper] cleanup supervisor_pilot 27279 11849
[2025-10-11 13:05:36] 2025-10-11 17:05:36,028 [wrapper] Test setup, not cleaning
[2025-10-11 13:05:36] 2025-10-11 17:05:36,033 [wrapper] apfmon messages muted
[2025-10-11 13:05:36] 2025-10-11 17:05:36,037 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:05:36] 2025-10-11 17:05:36,042 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:05:36]  *** Error codes and diagnostics ***
[2025-10-11 13:05:36]     "exeErrorCode": 0,
[2025-10-11 13:05:36]     "exeErrorDiag": "",
[2025-10-11 13:05:36]     "pilotErrorCode": 0,
[2025-10-11 13:05:36]     "pilotErrorDiag": "",
[2025-10-11 13:05:36]  *** Listing of results directory ***
[2025-10-11 13:05:36] total 420936
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 08:28 pilot3.tar.gz
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 08:45 queuedata.json
[2025-10-11 13:05:36] -rwx------ 1 boincer umatlas     36292 Oct 11 08:46 runpilot2-wrapper.sh
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas       100 Oct 11 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:05:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 10:58 run_atlas
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas       105 Oct 11 10:58 job.xml
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas 224843467 Oct 11 10:58 EVNT.46676267._002324.pool.root.1
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:58 start_atlas.sh
[2025-10-11 13:05:36] drwxrwx--x 2 boincer umatlas      4096 Oct 11 10:58 shared
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 10:58 input.tar.gz
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas         0 Oct 11 10:58 boinc_lockfile
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 10:59 pandaJob.out
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas    975536 Oct 11 10:59 agis_schedconf.cvmfs.json
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas   1560580 Oct 11 10:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:05:36] drwx------ 5 boincer umatlas      4096 Oct 11 10:59 pilot3
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas      5909 Oct 11 13:01 init_data.xml
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas 199428524 Oct 11 13:03 HITS.46676269._057956.pool.root.1
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas        95 Oct 11 13:04 pilot_heartbeat.json
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas       530 Oct 11 13:04 boinc_task_state.xml
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas      1050 Oct 11 13:04 memory_monitor_summary.json
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas    368633 Oct 11 13:04 log.46676269._057956.job.log.tgz.1
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas      7843 Oct 11 13:04 heartbeat.json
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 13:05 boinc_mmap_file
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas        27 Oct 11 13:05 wrapper_checkpoint.txt
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas      4746 Oct 11 13:05 pilotlog.txt
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas   1062219 Oct 11 13:05 log.46676269._057956.job.log.1
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas       357 Oct 11 13:05 output.list
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas       620 Oct 11 13:05 runtime_log
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas   1454080 Oct 11 13:05 result.tar.gz
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 13:05 runtime_log.err
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas       659 Oct 11 13:05 M5JKDmvAoR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTTgNDmaRGIom.diag
[2025-10-11 13:05:36] -rw-r--r-- 1 boincer umatlas     20892 Oct 11 13:05 stderr.txt
[2025-10-11 13:05:36] HITS file was successfully produced:
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas 199428524 Oct 11 13:03 shared/HITS.pool.root.1
[2025-10-11 13:05:36]  *** Contents of shared directory: ***
[2025-10-11 13:05:36] total 416332
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas 224843467 Oct 11 10:58 ATLAS.root_0
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:58 start_atlas.sh
[2025-10-11 13:05:36] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 10:58 input.tar.gz
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas 199428524 Oct 11 13:03 HITS.pool.root.1
[2025-10-11 13:05:36] -rw------- 1 boincer umatlas   1454080 Oct 11 13:05 result.tar.gz
13:05:37 (8037): run_atlas exited; CPU time 55660.232409
13:05:37 (8037): called boinc_finish(0)

</stderr_txt>
]]>

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