Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:30 (717751): wrapper (7.7.26015): starting
07:54:30 (717751): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:54:30] Arguments: --nthreads 8
[2025-10-11 07:54:30] Threads: 8
[2025-10-11 07:54:30] Checking for CVMFS
[2025-10-11 07:54:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:54:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:54:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:54:31] 2.11.3.0 4007 30197 222836 151587 3 480 44402826 45568001 13927 130560 0 164797265 99.845 73739614 25818 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 07:54:31] CVMFS is ok
[2025-10-11 07:54:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:54:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:54:31] Further information can be found at the LHC@home message board.
[2025-10-11 07:54:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:54:31] Checking for apptainer binary...
[2025-10-11 07:54:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:54:31] Running /usr/bin/apptainer --version
[2025-10-11 07:54:31] apptainer version 1.4.1-1.el9
[2025-10-11 07:54:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:54:31] wns0017.triumf.lcg
[2025-10-11 07:54:31] apptainer works
[2025-10-11 07:54:31] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:54:31] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:54:31] Starting ATLAS job with PandaID=6838450900
[2025-10-11 07:54:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:58:55]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:58:55] 2025-10-11 14:58:09,947 | WARNING  | wrong length of table data, x=[1760194529.0], y=[1600.0] (must be same and length>=4)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . Timing measurements:
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . get job = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . initial setup = 3 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload setup = 11 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-in = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload execution = 40 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-out = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . log creation = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838450900/pilotlog.txt
[2025-10-11 07:58:55] 2025-10-11 14:58:10,024 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 07:58:55] - Log from pilotlog.txt -
[2025-10-11 07:58:55] 2025-10-11 14:58:09,938 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:58:55] 2025-10-11 14:58:09,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | found no stored workdir sizes
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:58:55] 2025-10-11 14:58:09,947 | WARNING  | wrong length of table data, x=[1760194529.0], y=[1600.0] (must be same and length>=4)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . Timing measurements:
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . get job = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . initial setup = 3 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload setup = 11 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-in = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload execution = 40 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-out = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . log creation = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838450900/pilotlog.txt
[2025-10-11 07:58:55] 2025-10-11 14:58:10,026 | WARNING  | 
[2025-10-11 07:58:55] [begin log extracts]
[2025-10-11 07:58:55] - Log from pilotlog.txt -
[2025-10-11 07:58:55] 2025-10-11 14:58:09,938 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:58:55] 2025-10-11 14:58:09,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | WARNING  | found no stored workdir sizes
[2025-10-11 07:58:55] 2025-10-11 14:58:09,939 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:58:55] 2025-10-11 14:58:09,947 | WARNING  | wrong length of table data, x=[1760194529.0], y=[1600.0] (must be same and length>=4)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . Timing measurements:
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . get job = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . initial setup = 3 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload setup = 11 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-in = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . payload execution = 40 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . stage-out = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,948 | INFO     | . log creation = 0 s
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | ..............................
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:58:55] 2025-10-11 14:58:09,949 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838450900/pilotlog.txt
[2025-10-11 07:58:55] [end log extracts]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,026 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 07:58:55] 2025-10-11 14:58:10,027 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 07:58:55] 2025-10-11 14:58:10,618 | INFO     | PID=721486 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:58:55] 2025-10-11 14:58:10,618 | INFO     | .. there are 26 such processes running
[2025-10-11 07:58:55] 2025-10-11 14:58:10,624 | INFO     | 
[2025-10-11 07:58:55] 2025-10-11 14:58:10,624 | INFO     | job summary report
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | --------------------------------------------------
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | PanDA job id: 6838450900
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | task id: 46676269
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 07:55:54,566 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | pilot state: failed 
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | transexitcode: 65
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | exeerrorcode: 65
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | exitcode: 65
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | cpuconsumptiontime: 20 s
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | nevents: 0
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | neventsw: 0
[2025-10-11 07:58:55] 2025-10-11 14:58:10,625 | INFO     | pid: 728089
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | pgrp: 728089
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | corecount: 8
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | event service: False
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | sizes: {0: 2348854, 8: 2349116, 11: 2349144, 56: 2376685, 183: 2376823}
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | --------------------------------------------------
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | 
[2025-10-11 07:58:55] 2025-10-11 14:58:10,626 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:58:55] 2025-10-11 14:58:10,715 | INFO     | job 6838450900 has completed (purged errors)
[2025-10-11 07:58:55] 2025-10-11 14:58:10,715 | INFO     | overall cleanup function is called
[2025-10-11 07:58:55] 2025-10-11 14:58:11,725 | INFO     | --- collectZombieJob: --- 10, [728089]
[2025-10-11 07:58:55] 2025-10-11 14:58:11,725 | INFO     | zombie collector waiting for pid 728089
[2025-10-11 07:58:55] 2025-10-11 14:58:11,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:58:55] 2025-10-11 14:58:11,725 | INFO     | collected zombie processes
[2025-10-11 07:58:55] 2025-10-11 14:58:11,726 | INFO     | will attempt to kill all subprocesses of pid=728089
[2025-10-11 07:58:55] 2025-10-11 14:58:12,744 | INFO     | process IDs to be killed: [728089] (in reverse order)
[2025-10-11 07:58:55] 2025-10-11 14:58:12,842 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:58:55] 2025-10-11 14:58:12,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:58:55] 2025-10-11 14:58:12,900 | INFO     | did not find any defunct processes belonging to 728089
[2025-10-11 07:58:55] 2025-10-11 14:58:12,908 | INFO     | did not find any defunct processes belonging to 728089
[2025-10-11 07:58:55] 2025-10-11 14:58:12,908 | INFO     | ready for new job
[2025-10-11 07:58:55] 2025-10-11 14:58:12,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:58:55] 2025-10-11 14:58:12,910 | INFO     | ***************************************
[2025-10-11 07:58:55] 2025-10-11 14:58:12,910 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:58:55] 2025-10-11 14:58:12,910 | INFO     | ***************************************
[2025-10-11 07:58:55] 2025-10-11 14:58:12,910 | INFO     | 
[2025-10-11 07:58:55] 2025-10-11 14:58:12,912 | INFO     | architecture information:
[2025-10-11 07:58:55] 2025-10-11 14:58:12,948 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:58:55] 2025-10-11 14:58:13,001 | INFO     | cat /etc/os-release:
[2025-10-11 07:58:55] NAME="CentOS Linux"
[2025-10-11 07:58:55] VERSION="7 (Core)"
[2025-10-11 07:58:55] ID="centos"
[2025-10-11 07:58:55] ID_LIKE="rhel fedora"
[2025-10-11 07:58:55] VERSION_ID="7"
[2025-10-11 07:58:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:58:55] ANSI_COLOR="0;31"
[2025-10-11 07:58:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:58:55] HOME_URL="https://www.centos.org/"
[2025-10-11 07:58:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:58:55] 
[2025-10-11 07:58:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:58:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:58:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:58:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:58:55] 
[2025-10-11 07:58:55] 2025-10-11 14:58:13,003 | INFO     | ***************************************
[2025-10-11 07:58:55] 2025-10-11 14:58:13,508 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 07:58:55] 2025-10-11 14:58:13,568 | INFO     | sufficient remaining disk space (1218598404096 B)
[2025-10-11 07:58:55] 2025-10-11 14:58:13,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:58:55] 2025-10-11 14:58:13,568 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:58:55] 2025-10-11 14:58:13,568 | INFO     | update_server=False
[2025-10-11 07:58:55] 2025-10-11 14:58:13,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:58:55] 2025-10-11 14:58:13,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:58:55] 2025-10-11 14:58:13,569 | INFO     | aborting loop
[2025-10-11 07:58:55] 2025-10-11 14:58:13,825 | INFO     | all data control threads have been joined
[2025-10-11 07:58:55] 2025-10-11 14:58:13,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:58:55] 2025-10-11 14:58:14,536 | INFO     | all job control threads have been joined
[2025-10-11 07:58:55] 2025-10-11 14:58:14,561 | INFO     | all payload control threads have been joined
[2025-10-11 07:58:55] 2025-10-11 14:58:14,574 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,577 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,663 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,670 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,715 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,817 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:14,831 | INFO     | [data] control thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,005 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,415 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,472 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:58:55] 2025-10-11 14:58:15,543 | INFO     | [job] control thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,566 | INFO     | [payload] control thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:15,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:58:55] 2025-10-11 14:58:15,950 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:16,060 | INFO     | [job] validate thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:16,685 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:19,508 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:58:55] 2025-10-11 14:58:42,980 | INFO     | PID=721486 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:58:55] 2025-10-11 14:58:42,980 | INFO     | .. there are 26 such processes running
[2025-10-11 07:58:55] 2025-10-11 14:58:42,981 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:58:55] 2025-10-11 14:58:42,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:58:55] 2025-10-11 14:58:42,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:58:55] 2025-10-11 14:58:48,579 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:58:55] 2025-10-11 14:58:49,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609858201408)>', '<ExcThread(monitor, started 140609461393152)>']
[2025-10-11 07:58:55] 2025-10-11 14:58:50,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:58:55] 2025-10-11 14:58:50,029 | INFO     | [monitor] control thread has ended
[2025-10-11 07:58:55] 2025-10-11 14:58:54,371 | INFO     | all workflow threads have been joined
[2025-10-11 07:58:55] 2025-10-11 14:58:54,371 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:58:55] 2025-10-11 14:58:54,372 | INFO     | traces error code: 0
[2025-10-11 07:58:55] 2025-10-11 14:58:54,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:58:55] 2025-10-11 14:58:54,830 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:58:55] 2025-10-11 14:58:54,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:58:55] 2025-10-11 14:58:54,837 [wrapper] pilotpid: 721486
[2025-10-11 07:58:55] 2025-10-11 14:58:54,841 [wrapper] Pilot exit status: 0
[2025-10-11 07:58:55] 2025-10-11 14:58:54,881 [wrapper] pandaids: 6838450900
[2025-10-11 07:58:55] 2025-10-11 14:58:54,923 [wrapper] cleanup supervisor_pilot  721492 721487
[2025-10-11 07:58:55] 2025-10-11 14:58:54,925 [wrapper] Test setup, not cleaning
[2025-10-11 07:58:55] 2025-10-11 14:58:54,927 [wrapper] apfmon messages muted
[2025-10-11 07:58:55] 2025-10-11 14:58:54,928 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:58:55] 2025-10-11 14:58:54,930 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:58:55]  *** Error codes and diagnostics ***
[2025-10-11 07:58:55]     "exeErrorCode": 65,
[2025-10-11 07:58:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 07:58:55]     "pilotErrorCode": 1305,
[2025-10-11 07:58:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 07:58:55]  *** Listing of results directory ***
[2025-10-11 07:58:55] total 223804
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc    557409 Oct 11 05:28 pilot3.tar.gz
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      5112 Oct 11 05:45 queuedata.json
[2025-10-11 07:58:55] -rwx------. 1 boinc boinc     36292 Oct 11 05:46 runpilot2-wrapper.sh
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc       100 Oct 11 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:58:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 07:54 run_atlas
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc       105 Oct 11 07:54 job.xml
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc 225072334 Oct 11 07:54 EVNT.46676267._002320.pool.root.1
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      6444 Oct 11 07:54 init_data.xml
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc     15120 Oct 11 07:54 start_atlas.sh
[2025-10-11 07:58:55] drwxrwx--x. 2 boinc boinc      4096 Oct 11 07:54 shared
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc    569682 Oct 11 07:54 input.tar.gz
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc         0 Oct 11 07:54 boinc_lockfile
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      2550 Oct 11 07:54 pandaJob.out
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc    975536 Oct 11 07:54 agis_schedconf.cvmfs.json
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc   1560580 Oct 11 07:54 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:58:55] drwx------. 5 boinc boinc      4096 Oct 11 07:54 pilot3
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc       522 Oct 11 07:55 boinc_task_state.xml
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc       976 Oct 11 07:55 memory_monitor_summary.json
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc     21430 Oct 11 07:56 log.46676269._057847.job.log.tgz.1
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc        95 Oct 11 07:57 pilot_heartbeat.json
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc      8403 Oct 11 07:58 heartbeat.json
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      8192 Oct 11 07:58 boinc_mmap_file
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc        22 Oct 11 07:58 wrapper_checkpoint.txt
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc      4822 Oct 11 07:58 pilotlog.txt
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc     86810 Oct 11 07:58 log.46676269._057847.job.log.1
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc       188 Oct 11 07:58 output.list
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc       620 Oct 11 07:58 runtime_log
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc    122880 Oct 11 07:58 result.tar.gz
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc       646 Oct 11 07:58 wsVKDmFAoR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmktRMDmKyQq0n.diag
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      8526 Oct 11 07:58 runtime_log.err
[2025-10-11 07:58:55] -rw-r--r--. 1 boinc boinc      8213 Oct 11 07:58 stderr.txt
[2025-10-11 07:58:55] No HITS result produced
[2025-10-11 07:58:55]  *** Contents of shared directory: ***
[2025-10-11 07:58:55] total 220496
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc 225072334 Oct 11 07:54 ATLAS.root_0
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc     15120 Oct 11 07:54 start_atlas.sh
[2025-10-11 07:58:55] -rw-r--r--. 2 boinc boinc    569682 Oct 11 07:54 input.tar.gz
[2025-10-11 07:58:55] -rw-------. 1 boinc boinc    122880 Oct 11 07:58 result.tar.gz
07:58:56 (717751): run_atlas exited; CPU time 26.430010
07:58:56 (717751): called boinc_finish(0)

</stderr_txt>
]]>

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