Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:43 (4079179): wrapper (7.7.26015): starting
20:08:43 (4079179): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 20:08:43] Arguments: --nthreads 4
[2025-10-12 20:08:43] Threads: 4
[2025-10-12 20:08:43] Checking for CVMFS
[2025-10-12 20:08:43] No cvmfs_config command found, will try listing directly
[2025-10-12 20:08:43] CVMFS is ok
[2025-10-12 20:08:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:08:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:08:43] Further information can be found at the LHC@home message board.
[2025-10-12 20:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:08:43] Checking for apptainer binary...
[2025-10-12 20:08:43] which: no apptainer in ((null))
[2025-10-12 20:08:43] apptainer is not installed, using version from CVMFS
[2025-10-12 20:08:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:08:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-12 20:08:43] apptainer works
[2025-10-12 20:08:43] Set ATHENA_PROC_NUMBER=4
[2025-10-12 20:08:43] Set ATHENA_CORE_NUMBER=4
[2025-10-12 20:08:43] Starting ATLAS job with PandaID=6838450855
[2025-10-12 20:08:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:17:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:17:54] 2025-10-12 21:03:17,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:17:54] 2025-10-12 21:03:18,077 | INFO     | time since job start (10464s) is within the limit (172800.0s)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,047 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 23:17:54] 2025-10-12 21:03:19,058 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2697.75059375
[2025-10-12 23:17:54] 2025-10-12 21:03:19,070 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6838450855/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,071 | INFO     | extracted standard info from prmon json
[2025-10-12 23:17:54] 2025-10-12 21:03:19,071 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:17:54] 2025-10-12 21:03:19,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:17:54] 2025-10-12 21:03:19,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:17:54] 2025-10-12 21:03:19,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:17:54] 2025-10-12 21:03:19,076 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:17:54] 2025-10-12 21:03:19,076 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,077 | INFO     | sum of deviations: -23680634380.999992
[2025-10-12 23:17:54] 2025-10-12 21:03:19,077 | INFO     | mean x: 1760297746.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,077 | INFO     | mean y: 2379306.6549707605
[2025-10-12 23:17:54] 2025-10-12 21:03:19,078 | INFO     | -- intersect: 26888464024.303097
[2025-10-12 23:17:54] 2025-10-12 21:03:19,078 | INFO     | intersect: 26888464024.303097
[2025-10-12 23:17:54] 2025-10-12 21:03:19,078 | INFO     | chi2: 1.5813484716585058
[2025-10-12 23:17:54] 2025-10-12 21:03:19,078 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 23:17:54] 2025-10-12 21:03:19,079 | INFO     | sum of deviations: -22728239703.500004
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | mean x: 1760297593.5
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | mean y: 2380406.5843373495
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | -- intersect: 28209904573.893948
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | intersect: 28209904573.893948
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | chi2: 1.576781185873267
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | current chi2=1.576781185873267 (change=0.28882222148345715 %)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,080 | INFO     | right removable region: 165
[2025-10-12 23:17:54] 2025-10-12 21:03:19,081 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 23:17:54] 2025-10-12 21:03:19,082 | INFO     | sum of deviations: -41126470351.999985
[2025-10-12 23:17:54] 2025-10-12 21:03:19,082 | INFO     | mean x: 1760297898.5
[2025-10-12 23:17:54] 2025-10-12 21:03:19,082 | INFO     | mean y: 2399034.1807228914
[2025-10-12 23:17:54] 2025-10-12 21:03:19,082 | INFO     | -- intersect: 51043576111.938835
[2025-10-12 23:17:54] 2025-10-12 21:03:19,082 | INFO     | intersect: 51043576111.938835
[2025-10-12 23:17:54] 2025-10-12 21:03:19,083 | INFO     | chi2: 0.34327097883554053
[2025-10-12 23:17:54] 2025-10-12 21:03:19,083 | INFO     | current chi2=0.34327097883554053 (change=78.29251521800754 %)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,083 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,084 | INFO     | sum of deviations: -33367410164.000004
[2025-10-12 23:17:54] 2025-10-12 21:03:19,084 | INFO     | mean x: 1760298051.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,084 | INFO     | mean y: 2389510.1614906834
[2025-10-12 23:17:54] 2025-10-12 21:03:19,084 | INFO     | -- intersect: 45393353984.487816
[2025-10-12 23:17:54] 2025-10-12 21:03:19,084 | INFO     | intersect: 45393353984.487816
[2025-10-12 23:17:54] 2025-10-12 21:03:19,085 | INFO     | chi2: 0.32087097205733184
[2025-10-12 23:17:54] 2025-10-12 21:03:19,085 | INFO     | current chi2=0.32087097205733184 (change=6.525458940396015 %)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,085 | INFO     | left removable region: 20
[2025-10-12 23:17:54] 2025-10-12 21:03:19,085 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,086 | INFO     | sum of deviations: -16082951706.000002
[2025-10-12 23:17:54] 2025-10-12 21:03:19,086 | INFO     | mean x: 1760298173.0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,086 | INFO     | mean y: 2368090.5862068967
[2025-10-12 23:17:54] 2025-10-12 21:03:19,086 | INFO     | -- intersect: 29951912614.761677
[2025-10-12 23:17:54] 2025-10-12 21:03:19,086 | INFO     | intersect: 29951912614.761677
[2025-10-12 23:17:54] 2025-10-12 21:03:19,087 | INFO     | chi2: 0.2229735724921686
[2025-10-12 23:17:54] 2025-10-12 21:03:19,087 | INFO     | -- intersect: 29951912614.761677
[2025-10-12 23:17:54] 2025-10-12 21:03:19,087 | INFO     | current memory leak: -17.01 B/s (using 145 data points, chi2=0.22)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | could have reported an average CPU frequency of 2681 MHz (9 samples)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | ..............................
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . Timing measurements:
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . get job = 0 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . initial setup = 1 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . payload setup = 6 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . stage-in = 0 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . payload execution = 10426 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . stage-out = 0 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | . log creation = 0 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,088 | INFO     | ..............................
[2025-10-12 23:17:54] 2025-10-12 21:03:19,554 | INFO     | 
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | job summary report
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | --------------------------------------------------
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | PanDA job id: 6838450855
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | task id: 46676269
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | errors: (none)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | pilot state: finished 
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | transexitcode: 0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,555 | INFO     | exeerrorcode: 0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | exeerrordiag: 
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | exitcode: 0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | exitmsg: OK
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | cpuconsumptiontime: 40303 s
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | nevents: 400
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | neventsw: 0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | pid: 4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | pgrp: 4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | corecount: 4
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | event service: False
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | sizes: {0: 2348868, 5: 2349130, 11: 2349186, 10436: 2378020, 10437: 2387040, 10440: 2387096, 10449: 2387482}
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | --------------------------------------------------
[2025-10-12 23:17:54] 2025-10-12 21:03:19,556 | INFO     | 
[2025-10-12 23:17:54] 2025-10-12 21:03:19,557 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-12 23:17:54] 2025-10-12 21:03:19,579 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | job 6838450855 has completed (purged errors)
[2025-10-12 23:17:54] 2025-10-12 21:03:19,581 | INFO     | overall cleanup function is called
[2025-10-12 23:17:54] 2025-10-12 21:03:20,589 | INFO     | --- collectZombieJob: --- 10, [4089972]
[2025-10-12 23:17:54] 2025-10-12 21:03:20,589 | INFO     | zombie collector waiting for pid 4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:20,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:17:54] 2025-10-12 21:03:20,590 | INFO     | collected zombie processes
[2025-10-12 23:17:54] 2025-10-12 21:03:20,590 | INFO     | will attempt to kill all subprocesses of pid=4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:20,983 | INFO     | process IDs to be killed: [4089972] (in reverse order)
[2025-10-12 23:17:54] 2025-10-12 21:03:21,102 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:17:54] 2025-10-12 21:03:21,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:17:54] 2025-10-12 21:03:21,115 | INFO     | did not find any defunct processes belonging to 4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:21,127 | INFO     | did not find any defunct processes belonging to 4089972
[2025-10-12 23:17:54] 2025-10-12 21:03:21,127 | INFO     | ready for new job
[2025-10-12 23:17:54] 2025-10-12 21:03:21,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:17:54] 2025-10-12 21:03:21,130 | INFO     | ***************************************
[2025-10-12 23:17:54] 2025-10-12 21:03:21,130 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:17:54] 2025-10-12 21:03:21,130 | INFO     | ***************************************
[2025-10-12 23:17:54] 2025-10-12 21:03:21,130 | INFO     | 
[2025-10-12 23:17:54] 2025-10-12 21:03:21,134 | INFO     | architecture information:
[2025-10-12 23:17:54] 2025-10-12 21:03:21,134 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:17:54] 2025-10-12 21:03:21,152 | INFO     | cat /etc/os-release:
[2025-10-12 23:17:54] NAME="CentOS Linux"
[2025-10-12 23:17:54] VERSION="7 (Core)"
[2025-10-12 23:17:54] ID="centos"
[2025-10-12 23:17:54] ID_LIKE="rhel fedora"
[2025-10-12 23:17:54] VERSION_ID="7"
[2025-10-12 23:17:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:17:54] ANSI_COLOR="0;31"
[2025-10-12 23:17:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:17:54] HOME_URL="https://www.centos.org/"
[2025-10-12 23:17:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:17:54] 
[2025-10-12 23:17:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:17:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:17:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:17:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:17:54] 
[2025-10-12 23:17:54] 2025-10-12 21:03:21,152 | INFO     | ***************************************
[2025-10-12 23:17:54] 2025-10-12 21:03:21,655 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-12 23:17:54] 2025-10-12 21:03:21,672 | INFO     | sufficient remaining disk space (691422625792 B)
[2025-10-12 23:17:54] 2025-10-12 21:03:21,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:17:54] 2025-10-12 21:03:21,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:17:54] 2025-10-12 21:03:21,673 | INFO     | update_server=False
[2025-10-12 23:17:54] 2025-10-12 21:03:21,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:17:54] 2025-10-12 21:03:21,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:17:54] 2025-10-12 21:03:21,674 | INFO     | aborting loop
[2025-10-12 23:17:54] 2025-10-12 21:03:21,703 | INFO     | all payload control threads have been joined
[2025-10-12 23:17:54] 2025-10-12 21:03:22,294 | INFO     | all data control threads have been joined
[2025-10-12 23:17:54] 2025-10-12 21:03:22,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:17:54] 2025-10-12 21:03:22,678 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:22,679 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:22,708 | INFO     | [payload] control thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:22,911 | INFO     | all job control threads have been joined
[2025-10-12 23:17:54] 2025-10-12 21:03:22,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:22,947 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,203 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,300 | INFO     | [data] control thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,588 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,599 | INFO     | [job] validate thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,613 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,914 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:23,917 | INFO     | [job] control thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:24,041 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:24,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:17:54] 2025-10-12 21:03:24,680 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:25,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:17:54] 2025-10-12 21:03:25,206 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:29,111 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:17:54] 2025-10-12 21:03:50,145 | INFO     | 10467s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 23:17:54] 2025-10-12 21:03:51,654 | INFO     | PID=4082924 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:17:54] 2025-10-12 21:03:51,655 | INFO     | .. there are 5 such processes running
[2025-10-12 23:17:54] 2025-10-12 21:03:51,655 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:17:54] 2025-10-12 21:03:51,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:17:54] 2025-10-12 21:03:51,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:17:54] 2025-10-12 21:04:10,718 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:17:54] 2025-10-12 21:04:11,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22387518854976)>', '<ExcThread(monitor, started 22387282118400)>']
[2025-10-12 23:17:54] 2025-10-12 21:04:11,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:17:54] 2025-10-12 21:04:11,751 | INFO     | [monitor] control thread has ended
[2025-10-12 23:17:54] 2025-10-12 21:04:16,593 | INFO     | all workflow threads have been joined
[2025-10-12 23:17:54] 2025-10-12 21:04:16,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:17:54] 2025-10-12 21:04:16,594 | INFO     | traces error code: 0
[2025-10-12 23:17:54] 2025-10-12 21:04:16,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:17:54] 2025-10-12 21:04:16,775 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:17:54] 2025-10-12 21:04:16,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:17:54] 2025-10-12 21:04:16,780 [wrapper] pilotpid: 4082924
[2025-10-12 23:17:54] 2025-10-12 21:04:16,783 [wrapper] Pilot exit status: 0
[2025-10-12 23:17:54] 2025-10-12 21:04:16,794 [wrapper] pandaids: 6838450855
[2025-10-12 23:17:54] 2025-10-12 21:04:16,874 [wrapper] cleanup supervisor_pilot   81150 4082925
[2025-10-12 23:17:54] 2025-10-12 21:04:16,877 [wrapper] Test setup, not cleaning
[2025-10-12 23:17:54] 2025-10-12 21:04:16,880 [wrapper] apfmon messages muted
[2025-10-12 23:17:54] 2025-10-12 21:04:16,883 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:17:54] 2025-10-12 21:04:16,886 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:17:54]  *** Error codes and diagnostics ***
[2025-10-12 23:17:54]     "exeErrorCode": 0,
[2025-10-12 23:17:54]     "exeErrorDiag": "",
[2025-10-12 23:17:54]     "pilotErrorCode": 0,
[2025-10-12 23:17:54]     "pilotErrorDiag": "",
[2025-10-12 23:17:54]  *** Listing of results directory ***
[2025-10-12 23:17:54] total 415436
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc    557409 Oct 11 14:28 pilot3.tar.gz
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc      5112 Oct 11 14:40 queuedata.json
[2025-10-12 23:17:54] -rwx------ 1 boinc boinc     36292 Oct 11 14:41 runpilot2-wrapper.sh
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:17:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:08 run_atlas
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:08 job.xml
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc 220030848 Oct 12 20:08 EVNT.46676267._002318.pool.root.1
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc      6636 Oct 12 20:08 init_data.xml
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:08 start_atlas.sh
[2025-10-12 23:17:54] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:08 shared
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc    569684 Oct 12 20:08 input.tar.gz
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:08 boinc_lockfile
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:08 pandaJob.out
[2025-10-12 23:17:54] -rw------- 1 boinc boinc    975528 Oct 12 20:08 agis_schedconf.cvmfs.json
[2025-10-12 23:17:54] -rw------- 1 boinc boinc   1560580 Oct 12 20:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:17:54] drwx------ 5 boinc boinc      4096 Oct 12 20:08 pilot3
[2025-10-12 23:17:54] -rw------- 1 boinc boinc 197787389 Oct 12 23:02 HITS.46676269._057802.pool.root.1
[2025-10-12 23:17:54] -rw------- 1 boinc boinc        95 Oct 12 23:02 pilot_heartbeat.json
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc       528 Oct 12 23:02 boinc_task_state.xml
[2025-10-12 23:17:54] -rw------- 1 boinc boinc      1046 Oct 12 23:03 memory_monitor_summary.json
[2025-10-12 23:17:54] -rw------- 1 boinc boinc    350671 Oct 12 23:03 log.46676269._057802.job.log.tgz.1
[2025-10-12 23:17:54] -rw------- 1 boinc boinc      7830 Oct 12 23:03 heartbeat.json
[2025-10-12 23:17:54] -rw------- 1 boinc boinc      4949 Oct 12 23:04 pilotlog.txt
[2025-10-12 23:17:54] -rw------- 1 boinc boinc   1489873 Oct 12 23:04 log.46676269._057802.job.log.1
[2025-10-12 23:17:54] -rw------- 1 boinc boinc       357 Oct 12 23:04 output.list
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:04 runtime_log
[2025-10-12 23:17:54] -rw------- 1 boinc boinc   1863680 Oct 12 23:04 result.tar.gz
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc      9070 Oct 12 23:04 runtime_log.err
[2025-10-12 23:17:54] -rw------- 1 boinc boinc       665 Oct 12 23:04 0CIODm05nR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7RgNDmFSKwzm.diag
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc        26 Oct 12 23:17 wrapper_checkpoint.txt
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:17 boinc_mmap_file
[2025-10-12 23:17:54] -rw-r--r-- 1 boinc boinc     20949 Oct 12 23:17 stderr.txt
[2025-10-12 23:17:54] HITS file was successfully produced:
[2025-10-12 23:17:54] -rw------- 1 boinc boinc 197787389 Oct 12 23:02 shared/HITS.pool.root.1
[2025-10-12 23:17:54]  *** Contents of shared directory: ***
[2025-10-12 23:17:54] total 410432
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc 220030848 Oct 12 20:08 ATLAS.root_0
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:08 start_atlas.sh
[2025-10-12 23:17:54] -rw-r--r-- 2 boinc boinc    569684 Oct 12 20:08 input.tar.gz
[2025-10-12 23:17:54] -rw------- 1 boinc boinc 197787389 Oct 12 23:02 HITS.pool.root.1
[2025-10-12 23:17:54] -rw------- 1 boinc boinc   1863680 Oct 12 23:04 result.tar.gz
23:17:56 (4079179): run_atlas exited; CPU time 40708.938329
23:17:56 (4079179): called boinc_finish(0)

</stderr_txt>
]]>

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