Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:28:56 (3361677): wrapper (7.7.26015): starting
16:28:56 (3361677): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 16:28:56] Arguments: --nthreads 4
[2025-10-12 16:28:56] Threads: 4
[2025-10-12 16:28:56] Checking for CVMFS
[2025-10-12 16:28:56] No cvmfs_config command found, will try listing directly
[2025-10-12 16:28:56] CVMFS is ok
[2025-10-12 16:28:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:28:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:28:56] Further information can be found at the LHC@home message board.
[2025-10-12 16:28:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:28:56] Checking for apptainer binary...
[2025-10-12 16:28:56] which: no apptainer in ((null))
[2025-10-12 16:28:56] apptainer is not installed, using version from CVMFS
[2025-10-12 16:28:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:28:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-12 16:28:56] apptainer works
[2025-10-12 16:28:56] Set ATHENA_PROC_NUMBER=4
[2025-10-12 16:28:56] Set ATHENA_CORE_NUMBER=4
[2025-10-12 16:28:56] Starting ATLAS job with PandaID=6838290069
[2025-10-12 16:28:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:33:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:33:13] 2025-10-12 17:18:17,934 | INFO     | number of running child processes to parent process 3387560: 1
[2025-10-12 19:33:13] 2025-10-12 17:18:17,935 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:33:13] 2025-10-12 17:18:18,048 | INFO     | time since job start (10152s) is within the limit (172800.0s)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,216 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 19:33:13] 2025-10-12 17:18:19,223 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2871.778734375
[2025-10-12 19:33:13] 2025-10-12 17:18:19,230 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6838290069/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,230 | INFO     | extracted standard info from prmon json
[2025-10-12 19:33:13] 2025-10-12 17:18:19,231 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:33:13] 2025-10-12 17:18:19,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:33:13] 2025-10-12 17:18:19,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:33:13] 2025-10-12 17:18:19,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:33:13] 2025-10-12 17:18:19,233 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:33:13] 2025-10-12 17:18:19,233 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 19:33:13] 2025-10-12 17:18:19,234 | INFO     | sum of deviations: 16769428686.999996
[2025-10-12 19:33:13] 2025-10-12 17:18:19,234 | INFO     | mean x: 1760284404.5
[2025-10-12 19:33:13] 2025-10-12 17:18:19,234 | INFO     | mean y: 2321582.7108433736
[2025-10-12 19:33:13] 2025-10-12 17:18:19,234 | INFO     | -- intersect: -20809695846.11206
[2025-10-12 19:33:13] 2025-10-12 17:18:19,235 | INFO     | intersect: -20809695846.11206
[2025-10-12 19:33:13] 2025-10-12 17:18:19,235 | INFO     | chi2: 1.3507779168652119
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | sum of deviations: 16257449587.000002
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | mean x: 1760284252.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | mean y: 2320955.1304347827
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | -- intersect: -22113136261.592937
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | intersect: -22113136261.592937
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | chi2: 1.3519637713792223
[2025-10-12 19:33:13] 2025-10-12 17:18:19,236 | INFO     | current chi2=1.3519637713792223 (change=-0.08779048718552324 %)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | right removable region: 160
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | sum of deviations: -4970077175.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | mean x: 1760284557.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | mean y: 2347855.645962733
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | -- intersect: 6763282132.828266
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | intersect: 6763282132.828266
[2025-10-12 19:33:13] 2025-10-12 17:18:19,237 | INFO     | chi2: 0.0166845049673844
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | current chi2=0.0166845049673844 (change=98.76482249531405 %)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | sum of deviations: -4777686347.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | mean x: 1760284709.5
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | mean y: 2347598.5897435895
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | -- intersect: 7146754457.580788
[2025-10-12 19:33:13] 2025-10-12 17:18:19,238 | INFO     | intersect: 7146754457.580788
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | chi2: 0.01646460598124437
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | current chi2=0.01646460598124437 (change=1.3179832819127597 %)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | left removable region: 20
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | sum of square deviations: 850825255.0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | sum of deviations: -2815875473.0000005
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | mean x: 1760284831.5
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | mean y: 2344997.8571428573
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | -- intersect: 5828151006.065948
[2025-10-12 19:33:13] 2025-10-12 17:18:19,239 | INFO     | intersect: 5828151006.065948
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | chi2: 0.015144113454220969
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | -- intersect: 5828151006.065948
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | current memory leak: -3.31 B/s (using 140 data points, chi2=0.02)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | could have reported an average CPU frequency of 2748 MHz (9 samples)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | ..............................
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . Timing measurements:
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . get job = 0 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . initial setup = 1 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . payload setup = 5 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . stage-in = 0 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . payload execution = 10121 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,240 | INFO     | . stage-out = 0 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,241 | INFO     | . log creation = 0 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,241 | INFO     | ..............................
[2025-10-12 19:33:13] 2025-10-12 17:18:19,294 | INFO     | 
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | job summary report
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | --------------------------------------------------
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | PanDA job id: 6838290069
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | task id: 46676269
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | errors: (none)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | pilot state: finished 
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | transexitcode: 0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | exeerrorcode: 0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | exeerrordiag: 
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | exitcode: 0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | exitmsg: OK
[2025-10-12 19:33:13] 2025-10-12 17:18:19,295 | INFO     | cpuconsumptiontime: 39103 s
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | nevents: 400
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | neventsw: 0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | pid: 3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | pgrp: 3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | corecount: 4
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | event service: False
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | sizes: {0: 2347977, 1: 2348844, 5: 2349106, 12: 2349162, 10130: 2377883, 10132: 2387087, 10137: 2387289}
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | --------------------------------------------------
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | 
[2025-10-12 19:33:13] 2025-10-12 17:18:19,296 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 19:33:13] 2025-10-12 17:18:19,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,312 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:33:13] 2025-10-12 17:18:19,314 | INFO     | job 6838290069 has completed (purged errors)
[2025-10-12 19:33:13] 2025-10-12 17:18:19,314 | INFO     | overall cleanup function is called
[2025-10-12 19:33:13] 2025-10-12 17:18:20,322 | INFO     | --- collectZombieJob: --- 10, [3387560]
[2025-10-12 19:33:13] 2025-10-12 17:18:20,322 | INFO     | zombie collector waiting for pid 3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:20,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:33:13] 2025-10-12 17:18:20,323 | INFO     | collected zombie processes
[2025-10-12 19:33:13] 2025-10-12 17:18:20,323 | INFO     | will attempt to kill all subprocesses of pid=3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:20,649 | INFO     | process IDs to be killed: [3387560] (in reverse order)
[2025-10-12 19:33:13] 2025-10-12 17:18:20,751 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:33:13] 2025-10-12 17:18:20,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:33:13] 2025-10-12 17:18:20,763 | INFO     | did not find any defunct processes belonging to 3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:20,774 | INFO     | did not find any defunct processes belonging to 3387560
[2025-10-12 19:33:13] 2025-10-12 17:18:20,775 | INFO     | ready for new job
[2025-10-12 19:33:13] 2025-10-12 17:18:20,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:33:13] 2025-10-12 17:18:20,777 | INFO     | ***************************************
[2025-10-12 19:33:13] 2025-10-12 17:18:20,778 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:33:13] 2025-10-12 17:18:20,778 | INFO     | ***************************************
[2025-10-12 19:33:13] 2025-10-12 17:18:20,778 | INFO     | 
[2025-10-12 19:33:13] 2025-10-12 17:18:20,782 | INFO     | architecture information:
[2025-10-12 19:33:13] 2025-10-12 17:18:20,782 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:33:13] 2025-10-12 17:18:20,796 | INFO     | cat /etc/os-release:
[2025-10-12 19:33:13] NAME="CentOS Linux"
[2025-10-12 19:33:13] VERSION="7 (Core)"
[2025-10-12 19:33:13] ID="centos"
[2025-10-12 19:33:13] ID_LIKE="rhel fedora"
[2025-10-12 19:33:13] VERSION_ID="7"
[2025-10-12 19:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:33:13] ANSI_COLOR="0;31"
[2025-10-12 19:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:33:13] HOME_URL="https://www.centos.org/"
[2025-10-12 19:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:33:13] 
[2025-10-12 19:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:33:13] 
[2025-10-12 19:33:13] 2025-10-12 17:18:20,796 | INFO     | ***************************************
[2025-10-12 19:33:13] 2025-10-12 17:18:21,300 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 19:33:13] 2025-10-12 17:18:21,315 | INFO     | sufficient remaining disk space (695188062208 B)
[2025-10-12 19:33:13] 2025-10-12 17:18:21,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:33:13] 2025-10-12 17:18:21,315 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:33:13] 2025-10-12 17:18:21,316 | INFO     | update_server=False
[2025-10-12 19:33:13] 2025-10-12 17:18:21,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:33:13] 2025-10-12 17:18:21,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:33:13] 2025-10-12 17:18:21,443 | INFO     | aborting loop
[2025-10-12 19:33:13] 2025-10-12 17:18:21,490 | INFO     | all payload control threads have been joined
[2025-10-12 19:33:13] 2025-10-12 17:18:22,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:33:13] 2025-10-12 17:18:22,123 | INFO     | all data control threads have been joined
[2025-10-12 19:33:13] 2025-10-12 17:18:22,226 | INFO     | all job control threads have been joined
[2025-10-12 19:33:13] 2025-10-12 17:18:22,321 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:22,404 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:22,449 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:22,496 | INFO     | [payload] control thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:22,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:22,909 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,052 | INFO     | [job] validate thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,128 | INFO     | [data] control thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,187 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,231 | INFO     | [job] control thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,296 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,407 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:23,559 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:24,100 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:24,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:33:13] 2025-10-12 17:18:24,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:33:13] 2025-10-12 17:18:25,306 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:28,690 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:33:13] 2025-10-12 17:18:51,574 | INFO     | PID=3367900 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:33:13] 2025-10-12 17:18:51,575 | INFO     | .. there are 4 such processes running
[2025-10-12 19:33:13] 2025-10-12 17:18:51,576 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:33:13] 2025-10-12 17:18:51,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:33:13] 2025-10-12 17:18:51,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:33:13] 2025-10-12 17:19:21,401 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:33:13] 2025-10-12 17:19:21,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22422616139584)>', '<ExcThread(monitor, started 22422377957120)>']
[2025-10-12 19:33:13] 2025-10-12 17:19:22,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:33:13] 2025-10-12 17:19:22,722 | INFO     | [monitor] control thread has ended
[2025-10-12 19:33:13] 2025-10-12 17:19:26,806 | INFO     | all workflow threads have been joined
[2025-10-12 19:33:13] 2025-10-12 17:19:26,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:33:13] 2025-10-12 17:19:26,807 | INFO     | traces error code: 0
[2025-10-12 19:33:13] 2025-10-12 17:19:26,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:33:13] 2025-10-12 17:19:26,959 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:33:13] 2025-10-12 17:19:26,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:33:13] 2025-10-12 17:19:26,965 [wrapper] pilotpid: 3367900
[2025-10-12 19:33:13] 2025-10-12 17:19:26,967 [wrapper] Pilot exit status: 0
[2025-10-12 19:33:13] 2025-10-12 17:19:26,976 [wrapper] pandaids: 6838290069
[2025-10-12 19:33:13] 2025-10-12 17:19:27,047 [wrapper] cleanup supervisor_pilot 3558265 3367901
[2025-10-12 19:33:13] 2025-10-12 17:19:27,050 [wrapper] Test setup, not cleaning
[2025-10-12 19:33:13] 2025-10-12 17:19:27,052 [wrapper] apfmon messages muted
[2025-10-12 19:33:13] 2025-10-12 17:19:27,054 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:33:13] 2025-10-12 17:19:27,057 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:33:13]  *** Error codes and diagnostics ***
[2025-10-12 19:33:13]     "exeErrorCode": 0,
[2025-10-12 19:33:13]     "exeErrorDiag": "",
[2025-10-12 19:33:13]     "pilotErrorCode": 0,
[2025-10-12 19:33:13]     "pilotErrorDiag": "",
[2025-10-12 19:33:13]  *** Listing of results directory ***
[2025-10-12 19:33:13] total 410512
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc    557409 Oct 11 10:40 pilot3.tar.gz
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:52 queuedata.json
[2025-10-12 19:33:13] -rwx------ 1 boinc boinc     36292 Oct 11 10:52 runpilot2-wrapper.sh
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc       100 Oct 12 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:33:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:28 run_atlas
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc       105 Oct 12 16:28 job.xml
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc      6634 Oct 12 16:28 init_data.xml
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc 218526519 Oct 12 16:28 EVNT.46676267._000957.pool.root.1
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:28 start_atlas.sh
[2025-10-12 19:33:13] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:28 shared
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc    569686 Oct 12 16:28 input.tar.gz
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:28 boinc_lockfile
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc      2549 Oct 12 16:28 pandaJob.out
[2025-10-12 19:33:13] -rw------- 1 boinc boinc    975528 Oct 12 16:29 agis_schedconf.cvmfs.json
[2025-10-12 19:33:13] -rw------- 1 boinc boinc   1560580 Oct 12 16:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:33:13] drwx------ 5 boinc boinc      4096 Oct 12 16:29 pilot3
[2025-10-12 19:33:13] -rw------- 1 boinc boinc 194326840 Oct 12 19:17 HITS.46676269._054622.pool.root.1
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc       527 Oct 12 19:17 boinc_task_state.xml
[2025-10-12 19:33:13] -rw------- 1 boinc boinc        95 Oct 12 19:17 pilot_heartbeat.json
[2025-10-12 19:33:13] -rw------- 1 boinc boinc      1033 Oct 12 19:18 memory_monitor_summary.json
[2025-10-12 19:33:13] -rw------- 1 boinc boinc    347861 Oct 12 19:18 log.46676269._054622.job.log.tgz.1
[2025-10-12 19:33:13] -rw------- 1 boinc boinc      7825 Oct 12 19:18 heartbeat.json
[2025-10-12 19:33:13] -rw------- 1 boinc boinc      4833 Oct 12 19:19 pilotlog.txt
[2025-10-12 19:33:13] -rw------- 1 boinc boinc   1450675 Oct 12 19:19 log.46676269._054622.job.log.1
[2025-10-12 19:33:13] -rw------- 1 boinc boinc       357 Oct 12 19:19 output.list
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:19 runtime_log
[2025-10-12 19:33:13] -rw------- 1 boinc boinc   1822720 Oct 12 19:19 result.tar.gz
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc      9070 Oct 12 19:19 runtime_log.err
[2025-10-12 19:33:13] -rw------- 1 boinc boinc       664 Oct 12 19:19 C10LDmDWkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5ufNDmVgmUmn.diag
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:33 wrapper_checkpoint.txt
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:33 boinc_mmap_file
[2025-10-12 19:33:13] -rw-r--r-- 1 boinc boinc     20874 Oct 12 19:33 stderr.txt
[2025-10-12 19:33:13] HITS file was successfully produced:
[2025-10-12 19:33:13] -rw------- 1 boinc boinc 194326840 Oct 12 19:17 shared/HITS.pool.root.1
[2025-10-12 19:33:13]  *** Contents of shared directory: ***
[2025-10-12 19:33:13] total 405548
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc 218526519 Oct 12 16:28 ATLAS.root_0
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:28 start_atlas.sh
[2025-10-12 19:33:13] -rw-r--r-- 2 boinc boinc    569686 Oct 12 16:28 input.tar.gz
[2025-10-12 19:33:13] -rw------- 1 boinc boinc 194326840 Oct 12 19:17 HITS.pool.root.1
[2025-10-12 19:33:13] -rw------- 1 boinc boinc   1822720 Oct 12 19:19 result.tar.gz
19:33:15 (3361677): run_atlas exited; CPU time 39524.757914
19:33:15 (3361677): called boinc_finish(0)

</stderr_txt>
]]>

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