Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:15:17 (304834): wrapper (7.7.26015): starting
08:15:17 (304834): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 08:15:17] Arguments: --nthreads 12
[2025-10-11 08:15:17] Threads: 12
[2025-10-11 08:15:17] Checking for CVMFS
[2025-10-11 08:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:15:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:15:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:15:18] 2.11.3.0 3020 22683 166540 151587 0 474 40207450 45568001 21437 130560 0 317730352 99.891 117340619 27091 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 08:15:18] CVMFS is ok
[2025-10-11 08:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:15:18] Further information can be found at the LHC@home message board.
[2025-10-11 08:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:15:18] Checking for apptainer binary...
[2025-10-11 08:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 08:15:18] Running /usr/bin/apptainer --version
[2025-10-11 08:15:18] apptainer version 1.4.1-1.el9
[2025-10-11 08:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:15:19] wns0169.triumf.lcg
[2025-10-11 08:15:19] apptainer works
[2025-10-11 08:15:19] Set ATHENA_PROC_NUMBER=12
[2025-10-11 08:15:19] Set ATHENA_CORE_NUMBER=12
[2025-10-11 08:15:19] Starting ATLAS job with PandaID=6838366620
[2025-10-11 08:15:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:20:15]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:20:15] 2025-10-11 15:19:42,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | wrong length of table data, x=[1760195814.0], y=[1704.0] (must be same and length>=4)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | could have reported an average CPU frequency of 2837 MHz (4 samples)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . Timing measurements:
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . get job = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . initial setup = 3 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload setup = 16 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . stage-in = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload execution = 43 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . stage-out = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . log creation = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366620/pilotlog.txt
[2025-10-11 08:20:15] 2025-10-11 15:19:42,853 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 08:20:15] - Log from pilotlog.txt -
[2025-10-11 08:20:15] 2025-10-11 15:19:42,822 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838366620/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | INFO     | extracted standard info from prmon json
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:20:15] 2025-10-11 15:19:42,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | wrong length of table data, x=[1760195814.0], y=[1704.0] (must be same and length>=4)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | could have reported an average CPU frequency of 2837 MHz (4 samples)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . Timing measurements:
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . get job = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . initial setup = 3 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload setup = 16 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . stage-in = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload execution = 43 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . stage-out = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . log creation = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366620/pilotlog.txt
[2025-10-11 08:20:15] 2025-10-11 15:19:42,853 | WARNING  | 
[2025-10-11 08:20:15] [begin log extracts]
[2025-10-11 08:20:15] - Log from pilotlog.txt -
[2025-10-11 08:20:15] 2025-10-11 15:19:42,822 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838366620/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | INFO     | extracted standard info from prmon json
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:20:15] 2025-10-11 15:19:42,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:20:15] 2025-10-11 15:19:42,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | WARNING  | wrong length of table data, x=[1760195814.0], y=[1704.0] (must be same and length>=4)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | could have reported an average CPU frequency of 2837 MHz (4 samples)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . Timing measurements:
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . get job = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . initial setup = 3 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload setup = 16 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . stage-in = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,826 | INFO     | . payload execution = 43 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . stage-out = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | . log creation = 0 s
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | ..............................
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 08:20:15] 2025-10-11 15:19:42,827 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366620/pilotlog.txt
[2025-10-11 08:20:15] [end log extracts]
[2025-10-11 08:20:15] 2025-10-11 15:19:42,853 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 08:20:15] 2025-10-11 15:19:42,854 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 08:20:15] 2025-10-11 15:19:43,004 | INFO     | 
[2025-10-11 08:20:15] 2025-10-11 15:19:43,004 | INFO     | job summary report
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | --------------------------------------------------
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | PanDA job id: 6838366620
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | task id: 46676269
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 08:17:17,785 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | pilot state: failed 
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | transexitcode: 65
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | exeerrorcode: 65
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | exitcode: 65
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | cpuconsumptiontime: 15 s
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | nevents: 0
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | neventsw: 0
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | pid: 322288
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | pgrp: 322288
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | corecount: 12
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | event service: False
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | sizes: {0: 2348854, 11: 2348854, 16: 2349144, 22: 2349172, 63: 2372377, 64: 2376669, 66: 2376853, 200: 2377019}
[2025-10-11 08:20:15] 2025-10-11 15:19:43,005 | INFO     | --------------------------------------------------
[2025-10-11 08:20:15] 2025-10-11 15:19:43,006 | INFO     | 
[2025-10-11 08:20:15] 2025-10-11 15:19:43,006 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 08:20:15] 2025-10-11 15:19:43,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | job 6838366620 has completed (purged errors)
[2025-10-11 08:20:15] 2025-10-11 15:19:43,022 | INFO     | overall cleanup function is called
[2025-10-11 08:20:15] 2025-10-11 15:19:44,029 | INFO     | --- collectZombieJob: --- 10, [322288]
[2025-10-11 08:20:15] 2025-10-11 15:19:44,029 | INFO     | zombie collector waiting for pid 322288
[2025-10-11 08:20:15] 2025-10-11 15:19:44,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:20:15] 2025-10-11 15:19:44,030 | INFO     | collected zombie processes
[2025-10-11 08:20:15] 2025-10-11 15:19:44,030 | INFO     | will attempt to kill all subprocesses of pid=322288
[2025-10-11 08:20:15] 2025-10-11 15:19:44,335 | INFO     | process IDs to be killed: [322288] (in reverse order)
[2025-10-11 08:20:15] 2025-10-11 15:19:44,403 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:20:15] 2025-10-11 15:19:44,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:20:15] 2025-10-11 15:19:44,414 | INFO     | did not find any defunct processes belonging to 322288
[2025-10-11 08:20:15] 2025-10-11 15:19:44,425 | INFO     | did not find any defunct processes belonging to 322288
[2025-10-11 08:20:15] 2025-10-11 15:19:44,425 | INFO     | ready for new job
[2025-10-11 08:20:15] 2025-10-11 15:19:44,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:20:15] 2025-10-11 15:19:44,427 | INFO     | ***************************************
[2025-10-11 08:20:15] 2025-10-11 15:19:44,427 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:20:15] 2025-10-11 15:19:44,427 | INFO     | ***************************************
[2025-10-11 08:20:15] 2025-10-11 15:19:44,428 | INFO     | 
[2025-10-11 08:20:15] 2025-10-11 15:19:44,429 | INFO     | architecture information:
[2025-10-11 08:20:15] 2025-10-11 15:19:44,430 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:20:15] 2025-10-11 15:19:44,445 | INFO     | cat /etc/os-release:
[2025-10-11 08:20:15] NAME="CentOS Linux"
[2025-10-11 08:20:15] VERSION="7 (Core)"
[2025-10-11 08:20:15] ID="centos"
[2025-10-11 08:20:15] ID_LIKE="rhel fedora"
[2025-10-11 08:20:15] VERSION_ID="7"
[2025-10-11 08:20:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:20:15] ANSI_COLOR="0;31"
[2025-10-11 08:20:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:20:15] HOME_URL="https://www.centos.org/"
[2025-10-11 08:20:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:20:15] 
[2025-10-11 08:20:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:20:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:20:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:20:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:20:15] 
[2025-10-11 08:20:15] 2025-10-11 15:19:44,445 | INFO     | ***************************************
[2025-10-11 08:20:15] 2025-10-11 15:19:44,948 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | INFO     | sufficient remaining disk space (2366399053824 B)
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | INFO     | update_server=False
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:20:15] 2025-10-11 15:19:44,987 | INFO     | aborting loop
[2025-10-11 08:20:15] 2025-10-11 15:19:45,121 | INFO     | all job control threads have been joined
[2025-10-11 08:20:15] 2025-10-11 15:19:45,631 | INFO     | all data control threads have been joined
[2025-10-11 08:20:15] 2025-10-11 15:19:45,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:20:15] 2025-10-11 15:19:45,999 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,000 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,079 | INFO     | all payload control threads have been joined
[2025-10-11 08:20:15] 2025-10-11 15:19:46,125 | INFO     | [job] control thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:20:15] 2025-10-11 15:19:46,637 | INFO     | [data] control thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,651 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:46,838 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,085 | INFO     | [payload] control thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,260 | INFO     | [job] validate thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,333 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,335 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,477 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,498 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,771 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:47,940 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:20:15] 2025-10-11 15:19:47,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:20:15] 2025-10-11 15:19:48,991 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:50,235 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:20:15] 2025-10-11 15:19:50,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250165954368)>', '<ExcThread(monitor, started 140249766274816)>']
[2025-10-11 08:20:15] 2025-10-11 15:19:55,941 | INFO     | all workflow threads have been joined
[2025-10-11 08:20:15] 2025-10-11 15:19:55,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:20:15] 2025-10-11 15:19:55,941 | INFO     | traces error code: 0
[2025-10-11 08:20:15] 2025-10-11 15:19:55,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:20:15] 2025-10-11 15:20:15,217 | INFO     | PID=308594 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 08:20:15] 2025-10-11 15:20:15,217 | INFO     | .. there are 34 such processes running
[2025-10-11 08:20:15] 2025-10-11 15:20:15,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:20:15] 2025-10-11 15:20:15,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:20:15] 2025-10-11 15:20:15,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:20:15] 2025-10-11 15:20:15,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:20:15] 2025-10-11 15:20:15,218 | INFO     | [monitor] control thread has ended
[2025-10-11 08:20:15] 2025-10-11 15:20:15,339 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:20:15] 2025-10-11 15:20:15,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:20:15] 2025-10-11 15:20:15,354 [wrapper] pilotpid: 308594
[2025-10-11 08:20:15] 2025-10-11 15:20:15,361 [wrapper] Pilot exit status: 0
[2025-10-11 08:20:15] 2025-10-11 15:20:15,408 [wrapper] pandaids: 6838366620
[2025-10-11 08:20:15] 2025-10-11 15:20:15,514 [wrapper] cleanup supervisor_pilot  308603 308595
[2025-10-11 08:20:15] 2025-10-11 15:20:15,530 [wrapper] Test setup, not cleaning
[2025-10-11 08:20:15] 2025-10-11 15:20:15,545 [wrapper] apfmon messages muted
[2025-10-11 08:20:15] 2025-10-11 15:20:15,561 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:20:15] 2025-10-11 15:20:15,572 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:20:15]  *** Error codes and diagnostics ***
[2025-10-11 08:20:15]     "exeErrorCode": 65,
[2025-10-11 08:20:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 08:20:15]     "pilotErrorCode": 1305,
[2025-10-11 08:20:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 08:20:15]  *** Listing of results directory ***
[2025-10-11 08:20:15] total 221232
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc    557409 Oct 11 05:28 pilot3.tar.gz
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc      5112 Oct 11 05:30 queuedata.json
[2025-10-11 08:20:15] -rwx------. 1 boinc boinc     36292 Oct 11 05:30 runpilot2-wrapper.sh
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc       100 Oct 11 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:20:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 08:15 run_atlas
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc       105 Oct 11 08:15 job.xml
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc      6627 Oct 11 08:15 init_data.xml
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc 222412506 Oct 11 08:15 EVNT.46676267._002308.pool.root.1
[2025-10-11 08:20:15] drwxrwx--x. 2 boinc boinc      4096 Oct 11 08:15 shared
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc    569682 Oct 11 08:15 input.tar.gz
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc     15120 Oct 11 08:15 start_atlas.sh
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc         0 Oct 11 08:15 boinc_lockfile
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc      2550 Oct 11 08:15 pandaJob.out
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc    975536 Oct 11 08:15 agis_schedconf.cvmfs.json
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc   1560580 Oct 11 08:15 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:20:15] drwx------. 5 boinc boinc      4096 Oct 11 08:15 pilot3
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc       957 Oct 11 08:17 memory_monitor_summary.json
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc     21904 Oct 11 08:17 log.46676269._057503.job.log.tgz.1
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc      8394 Oct 11 08:19 heartbeat.json
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc       524 Oct 11 08:19 boinc_task_state.xml
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc      8192 Oct 11 08:20 boinc_mmap_file
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc        22 Oct 11 08:20 wrapper_checkpoint.txt
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc       822 Oct 11 08:20 pilotlog.txt
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc        95 Oct 11 08:20 pilot_heartbeat.json
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc     90717 Oct 11 08:20 log.46676269._057503.job.log.1
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc       188 Oct 11 08:20 output.list
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc       620 Oct 11 08:20 runtime_log
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc    133120 Oct 11 08:20 result.tar.gz
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc      8528 Oct 11 08:20 runtime_log.err
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc       646 Oct 11 08:20 RtiLDm3unR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSrRMDmEeZdWo.diag
[2025-10-11 08:20:15] -rw-r--r--. 1 boinc boinc     21779 Oct 11 08:20 stderr.txt
[2025-10-11 08:20:15] No HITS result produced
[2025-10-11 08:20:15]  *** Contents of shared directory: ***
[2025-10-11 08:20:15] total 217912
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc 222412506 Oct 11 08:15 ATLAS.root_0
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc    569682 Oct 11 08:15 input.tar.gz
[2025-10-11 08:20:15] -rw-r--r--. 2 boinc boinc     15120 Oct 11 08:15 start_atlas.sh
[2025-10-11 08:20:15] -rw-------. 1 boinc boinc    133120 Oct 11 08:20 result.tar.gz
08:20:17 (304834): run_atlas exited; CPU time 23.462156
08:20:17 (304834): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN