Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:39 (2180260): wrapper (7.7.26015): starting
10:46:39 (2180260): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:46:39] Arguments: --nthreads 8
[2025-10-11 10:46:39] Threads: 8
[2025-10-11 10:46:39] Checking for CVMFS
[2025-10-11 10:46:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:46:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:46:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:46:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:46:40] 2.13.1.0 4140 2936 71560 151587 2 188 33779039 39288833 3664 16776704 0 10150360 99.997 100473 33061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:46:40] CVMFS is ok
[2025-10-11 10:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:46:40] Further information can be found at the LHC@home message board.
[2025-10-11 10:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:46:40] Checking for apptainer binary...
[2025-10-11 10:46:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:46:40] Running /usr/bin/apptainer --version
[2025-10-11 10:46:40] apptainer version 1.4.3-1.el9
[2025-10-11 10:46:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:46:40] c-210-16.aglt2.org
[2025-10-11 10:46:40] apptainer works
[2025-10-11 10:46:40] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:46:40] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:46:40] Starting ATLAS job with PandaID=6838293429
[2025-10-11 10:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:28:24]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:28:24]  replicas=None
[2025-10-11 12:28:24]  scope=mc23_13p6TeV
[2025-10-11 12:28:24]  status=None
[2025-10-11 12:28:24]  status_code=0
[2025-10-11 12:28:24]  storage_token=
[2025-10-11 12:28:24]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6838293429/log.46676269._055377.job.log.tgz.1
[2025-10-11 12:28:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/e8/log.46676269._055377.job.log.tgz.1
[2025-10-11 12:28:24]  workdir=None
[2025-10-11 12:28:24] ]
[2025-10-11 12:28:24] 2025-10-11 16:27:45,765 | INFO     | transferring file log.46676269._055377.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6838293429/log.46676269._055377.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 12:28:24] 2025-10-11 16:27:45,765 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6838293429/log.46676269._055377.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._055377.job
[2025-10-11 12:28:24] 2025-10-11 16:27:45,781 | INFO     | adding to output.list: log.46676269._055377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/e8/log.46676269._055377.job.log.tg
[2025-10-11 12:28:24] 2025-10-11 16:27:45,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 12:28:24] 2025-10-11 16:27:45,782 | INFO     | summary of transferred files:
[2025-10-11 12:28:24] 2025-10-11 16:27:45,782 | INFO     |  -- lfn=log.46676269._055377.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 12:28:24] 2025-10-11 16:27:45,783 | INFO     | stage-out finished correctly
[2025-10-11 12:28:24] 2025-10-11 16:27:47,113 | INFO     | time since job start (6057s) is within the limit (172800.0s)
[2025-10-11 12:28:24] 2025-10-11 16:27:47,994 | INFO     | monitor loop #450: job 0:6838293429 is in state 'finished'
[2025-10-11 12:28:24] 2025-10-11 16:27:47,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:28:24] 2025-10-11 16:27:48,530 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 12:28:24] 2025-10-11 16:27:49,118 | INFO     | time since job start (6059s) is within the limit (172800.0s)
[2025-10-11 12:28:24] 2025-10-11 16:27:49,155 | INFO     | job 6838293429 has state=finished
[2025-10-11 12:28:24] 2025-10-11 16:27:49,155 | INFO     | preparing for final server update for job 6838293429 in state='finished'
[2025-10-11 12:28:24] 2025-10-11 16:27:49,156 | INFO     | this job has now completed (state=finished)
[2025-10-11 12:28:24] 2025-10-11 16:27:49,156 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 12:28:24] 2025-10-11 16:27:49,156 | INFO     | log transfer has been attempted: DONE
[2025-10-11 12:28:24] 2025-10-11 16:27:49,156 | INFO     | job 6838293429 has finished - writing final server update
[2025-10-11 12:28:24] 2025-10-11 16:27:49,157 | INFO     | total number of processed events: 400 (read)
[2025-10-11 12:28:24] 2025-10-11 16:27:49,158 | INFO     | executing command: lscpu
[2025-10-11 12:28:24] 2025-10-11 16:27:49,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 12:28:24] 2025-10-11 16:27:50,497 | INFO     | monitor loop #451: job 0:6838293429 is in state 'finished'
[2025-10-11 12:28:24] 2025-10-11 16:27:50,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:28:24] 2025-10-11 16:27:51,124 | INFO     | time since job start (6061s) is within the limit (172800.0s)
[2025-10-11 12:28:24] 2025-10-11 16:27:52,396 | INFO     | PID=2184055 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 12:28:24] 2025-10-11 16:27:52,397 | INFO     | .. there are 5 such processes running
[2025-10-11 12:28:24] 2025-10-11 16:27:52,663 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 12:28:24] 2025-10-11 16:27:52,669 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1845749999993
[2025-10-11 12:28:24] 2025-10-11 16:27:52,676 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838293429/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:28:24] 2025-10-11 16:27:52,677 | INFO     | extracted standard info from prmon json
[2025-10-11 12:28:24] 2025-10-11 16:27:52,677 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:28:24] 2025-10-11 16:27:52,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:28:24] 2025-10-11 16:27:52,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:28:24] 2025-10-11 16:27:52,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:28:24] 2025-10-11 16:27:52,680 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:28:24] 2025-10-11 16:27:52,680 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 12:28:24] 2025-10-11 16:27:52,681 | INFO     | sum of deviations: -5449428930.5
[2025-10-11 12:28:24] 2025-10-11 16:27:52,681 | INFO     | mean x: 1760197115.5
[2025-10-11 12:28:24] 2025-10-11 16:27:52,681 | INFO     | mean y: 2544786.25
[2025-10-11 12:28:24] 2025-10-11 16:27:52,681 | INFO     | -- intersect: 39732832108.87322
[2025-10-11 12:28:24] 2025-10-11 16:27:52,681 | INFO     | intersect: 39732832108.87322
[2025-10-11 12:28:24] 2025-10-11 16:27:52,682 | INFO     | chi2: 0.019649704520385176
[2025-10-11 12:28:24] 2025-10-11 16:27:52,682 | INFO     | -- intersect: 39732832108.87322
[2025-10-11 12:28:24] 2025-10-11 16:27:52,682 | INFO     | current memory leak: -22.57 B/s (using 92 data points, chi2=0.02)
[2025-10-11 12:28:24] 2025-10-11 16:27:52,682 | INFO     | could have reported an average CPU frequency of 2617 MHz (7 samples)
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | ..............................
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . Timing measurements:
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . get job = 0 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . initial setup = 2 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . payload setup = 5 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . stage-in = 0 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . payload execution = 6029 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,683 | INFO     | . stage-out = 1 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,684 | INFO     | . log creation = 0 s
[2025-10-11 12:28:24] 2025-10-11 16:27:52,684 | INFO     | ..............................
[2025-10-11 12:28:24] 2025-10-11 16:27:53,090 | INFO     | 
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | job summary report
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | --------------------------------------------------
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | PanDA job id: 6838293429
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | task id: 46676269
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | errors: (none)
[2025-10-11 12:28:24] 2025-10-11 16:27:53,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | pilot state: finished 
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | transexitcode: 0
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | exeerrorcode: 0
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | exeerrordiag: 
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | exitcode: 0
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | exitmsg: OK
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | cpuconsumptiontime: 44360 s
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | nevents: 400
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | neventsw: 0
[2025-10-11 12:28:24] 2025-10-11 16:27:53,092 | INFO     | pid: 2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | pgrp: 2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | corecount: 8
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | event service: False
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | sizes: {0: 2348029, 1: 2348885, 5: 2349147, 12: 2349203, 6039: 2376047, 6041: 2385045, 6043: 2385229, 6048: 2385423}
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | --------------------------------------------------
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | 
[2025-10-11 12:28:24] 2025-10-11 16:27:53,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 12:28:24] 2025-10-11 16:27:53,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | job 6838293429 has completed (purged errors)
[2025-10-11 12:28:24] 2025-10-11 16:27:53,114 | INFO     | overall cleanup function is called
[2025-10-11 12:28:24] 2025-10-11 16:27:54,122 | INFO     | --- collectZombieJob: --- 10, [2193926]
[2025-10-11 12:28:24] 2025-10-11 16:27:54,122 | INFO     | zombie collector waiting for pid 2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:54,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:28:24] 2025-10-11 16:27:54,122 | INFO     | collected zombie processes
[2025-10-11 12:28:24] 2025-10-11 16:27:54,123 | INFO     | will attempt to kill all subprocesses of pid=2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:54,345 | INFO     | process IDs to be killed: [2193926] (in reverse order)
[2025-10-11 12:28:24] 2025-10-11 16:27:54,406 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:28:24] 2025-10-11 16:27:54,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:28:24] 2025-10-11 16:27:54,413 | INFO     | did not find any defunct processes belonging to 2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:54,418 | INFO     | did not find any defunct processes belonging to 2193926
[2025-10-11 12:28:24] 2025-10-11 16:27:54,418 | INFO     | ready for new job
[2025-10-11 12:28:24] 2025-10-11 16:27:54,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:28:24] 2025-10-11 16:27:54,420 | INFO     | ***************************************
[2025-10-11 12:28:24] 2025-10-11 16:27:54,420 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:28:24] 2025-10-11 16:27:54,420 | INFO     | ***************************************
[2025-10-11 12:28:24] 2025-10-11 16:27:54,420 | INFO     | 
[2025-10-11 12:28:24] 2025-10-11 16:27:54,422 | INFO     | architecture information:
[2025-10-11 12:28:24] 2025-10-11 16:27:54,423 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:28:24] 2025-10-11 16:27:54,436 | INFO     | cat /etc/os-release:
[2025-10-11 12:28:24] NAME="CentOS Linux"
[2025-10-11 12:28:24] VERSION="7 (Core)"
[2025-10-11 12:28:24] ID="centos"
[2025-10-11 12:28:24] ID_LIKE="rhel fedora"
[2025-10-11 12:28:24] VERSION_ID="7"
[2025-10-11 12:28:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:28:24] ANSI_COLOR="0;31"
[2025-10-11 12:28:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:28:24] HOME_URL="https://www.centos.org/"
[2025-10-11 12:28:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:28:24] 
[2025-10-11 12:28:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:28:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:28:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:28:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:28:24] 
[2025-10-11 12:28:24] 2025-10-11 16:27:54,437 | INFO     | ***************************************
[2025-10-11 12:28:24] 2025-10-11 16:27:54,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 12:28:24] 2025-10-11 16:27:54,951 | INFO     | sufficient remaining disk space (51792314368 B)
[2025-10-11 12:28:24] 2025-10-11 16:27:54,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:28:24] 2025-10-11 16:27:54,952 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:28:24] 2025-10-11 16:27:54,952 | INFO     | update_server=False
[2025-10-11 12:28:24] 2025-10-11 16:27:54,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:28:24] 2025-10-11 16:27:54,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:28:24] 2025-10-11 16:27:54,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:28:24] 2025-10-11 16:27:54,953 | INFO     | aborting loop
[2025-10-11 12:28:24] 2025-10-11 16:27:55,225 | INFO     | all data control threads have been joined
[2025-10-11 12:28:24] 2025-10-11 16:27:55,434 | INFO     | all payload control threads have been joined
[2025-10-11 12:28:24] 2025-10-11 16:27:55,633 | INFO     | all job control threads have been joined
[2025-10-11 12:28:24] 2025-10-11 16:27:55,957 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:55,958 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,167 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,177 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,231 | INFO     | [data] control thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,304 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:28:24] 2025-10-11 16:27:56,439 | INFO     | [payload] control thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,638 | INFO     | [job] control thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,799 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:56,981 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:57,204 | INFO     | [job] validate thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:57,440 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:57,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:28:24] 2025-10-11 16:27:58,406 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:58,807 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:58,959 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:27:59,774 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:28:24] 2025-10-11 16:28:05,660 | INFO     | job.realtimelogging is not enabled
[2025-10-11 12:28:24] 2025-10-11 16:28:06,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:28:24] 2025-10-11 16:28:07,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523668096832)>', '<ExcThread(monitor, started 140523176179456)>']
[2025-10-11 12:28:24] 2025-10-11 16:28:12,280 | INFO     | all workflow threads have been joined
[2025-10-11 12:28:24] 2025-10-11 16:28:12,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:28:24] 2025-10-11 16:28:12,280 | INFO     | traces error code: 0
[2025-10-11 12:28:24] 2025-10-11 16:28:12,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:28:24] 2025-10-11 16:28:24,749 | INFO     | PID=2184055 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 12:28:24] 2025-10-11 16:28:24,749 | INFO     | .. there are 5 such processes running
[2025-10-11 12:28:24] 2025-10-11 16:28:24,749 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:28:24] 2025-10-11 16:28:24,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:28:24] 2025-10-11 16:28:24,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:28:24] 2025-10-11 16:28:24,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:28:24] 2025-10-11 16:28:24,750 | INFO     | [monitor] control thread has ended
[2025-10-11 12:28:24] 2025-10-11 16:28:24,865 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:28:24] 2025-10-11 16:28:24,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:28:24] 2025-10-11 16:28:24,870 [wrapper] pilotpid: 2184055
[2025-10-11 12:28:24] 2025-10-11 16:28:24,872 [wrapper] Pilot exit status: 0
[2025-10-11 12:28:24] 2025-10-11 16:28:24,882 [wrapper] pandaids: 6838293429
[2025-10-11 12:28:24] 2025-10-11 16:28:24,923 [wrapper] cleanup supervisor_pilot 2398701 2184056
[2025-10-11 12:28:24] 2025-10-11 16:28:24,925 [wrapper] Test setup, not cleaning
[2025-10-11 12:28:24] 2025-10-11 16:28:24,928 [wrapper] apfmon messages muted
[2025-10-11 12:28:24] 2025-10-11 16:28:24,930 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:28:24] 2025-10-11 16:28:24,932 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:28:24]  *** Error codes and diagnostics ***
[2025-10-11 12:28:24]     "exeErrorCode": 0,
[2025-10-11 12:28:24]     "exeErrorDiag": "",
[2025-10-11 12:28:24]     "pilotErrorCode": 0,
[2025-10-11 12:28:24]     "pilotErrorDiag": "",
[2025-10-11 12:28:24]  *** Listing of results directory ***
[2025-10-11 12:28:24] total 414972
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:19 pilot3.tar.gz
[2025-10-11 12:28:24] -rwx------. 1 boincer umatlas     36292 Oct 11 05:28 runpilot2-wrapper.sh
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:28 queuedata.json
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:28:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:46 run_atlas
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:46 job.xml
[2025-10-11 12:28:24] -rw-r--r--. 2 boincer umatlas 223103481 Oct 11 10:46 EVNT.46676267._002221.pool.root.1
[2025-10-11 12:28:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:46 start_atlas.sh
[2025-10-11 12:28:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:46 shared
[2025-10-11 12:28:24] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:46 input.tar.gz
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:46 boinc_lockfile
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 10:46 pandaJob.out
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas    975536 Oct 11 10:46 agis_schedconf.cvmfs.json
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:28:24] drwx------. 5 boincer umatlas      4096 Oct 11 10:46 pilot3
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 12:22 init_data.xml
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas 195432075 Oct 11 12:27 HITS.46676269._055377.pool.root.1
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas       529 Oct 11 12:27 boinc_task_state.xml
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas        95 Oct 11 12:27 pilot_heartbeat.json
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas      1034 Oct 11 12:27 memory_monitor_summary.json
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas    361267 Oct 11 12:27 log.46676269._055377.job.log.tgz.1
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas      7818 Oct 11 12:27 heartbeat.json
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas        27 Oct 11 12:28 wrapper_checkpoint.txt
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 12:28 boinc_mmap_file
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas       822 Oct 11 12:28 pilotlog.txt
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas    884416 Oct 11 12:28 log.46676269._055377.job.log.1
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas       357 Oct 11 12:28 output.list
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas       620 Oct 11 12:28 runtime_log
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas   1269760 Oct 11 12:28 result.tar.gz
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 12:28 runtime_log.err
[2025-10-11 12:28:24] -rw-------. 1 boincer umatlas       652 Oct 11 12:28 JtEODm54kR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmdRMDmyu10bm.diag
[2025-10-11 12:28:24] -rw-r--r--. 1 boincer umatlas     21884 Oct 11 12:28 stderr.txt
[2025-10-11 12:28:25] HITS file was successfully produced:
[2025-10-11 12:28:25] -rw-------. 1 boincer umatlas 195432075 Oct 11 12:27 shared/HITS.pool.root.1
[2025-10-11 12:28:25]  *** Contents of shared directory: ***
[2025-10-11 12:28:25] total 410552
[2025-10-11 12:28:25] -rw-r--r--. 2 boincer umatlas 223103481 Oct 11 10:46 ATLAS.root_0
[2025-10-11 12:28:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:46 start_atlas.sh
[2025-10-11 12:28:25] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:46 input.tar.gz
[2025-10-11 12:28:25] -rw-------. 1 boincer umatlas 195432075 Oct 11 12:27 HITS.pool.root.1
[2025-10-11 12:28:25] -rw-------. 1 boincer umatlas   1269760 Oct 11 12:28 result.tar.gz
12:28:26 (2180260): run_atlas exited; CPU time 44453.975750
12:28:26 (2180260): called boinc_finish(0)

</stderr_txt>
]]>

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