Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:56 (690579): wrapper (7.7.26015): starting
12:19:56 (690579): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 12:19:56] Arguments: --nthreads 9
[2025-10-11 12:19:56] Threads: 9
[2025-10-11 12:19:56] Checking for CVMFS
[2025-10-11 12:19:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:19:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:19:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:19:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:19:59] 2.13.2.0 6268 4471 115116 151590 3 65 22961181 40960000 21892 16776704 0 10605325 99.929 2155655 36610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 12:19:59] CVMFS is ok
[2025-10-11 12:19:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:19:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:19:59] Further information can be found at the LHC@home message board.
[2025-10-11 12:19:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:19:59] Checking for apptainer binary...
[2025-10-11 12:19:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:19:59] Running /usr/bin/apptainer --version
[2025-10-11 12:19:59] apptainer version 1.4.3-1.el9
[2025-10-11 12:19:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:20:00] c-211-35-1.aglt2.org
[2025-10-11 12:20:00] apptainer works
[2025-10-11 12:20:00] Set ATHENA_PROC_NUMBER=9
[2025-10-11 12:20:00] Set ATHENA_CORE_NUMBER=9
[2025-10-11 12:20:01] Starting ATLAS job with PandaID=6838293342
[2025-10-11 12:20:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:03:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:03:33] 2025-10-12 01:02:24,442 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:03:33] 2025-10-12 01:02:24,451 | INFO     | sum of square deviations: 40890726704.027504
[2025-10-11 21:03:33] 2025-10-12 01:02:24,470 | INFO     | sum of deviations: -60525916003.55203
[2025-10-11 21:03:33] 2025-10-12 01:02:24,483 | INFO     | mean x: 1760215368.5795677
[2025-10-11 21:03:33] 2025-10-12 01:02:24,483 | INFO     | mean y: 2532472.5815324164
[2025-10-11 21:03:33] 2025-10-12 01:02:24,483 | INFO     | -- intersect: 2607980116.443407
[2025-10-11 21:03:33] 2025-10-12 01:02:24,483 | INFO     | intersect: 2607980116.443407
[2025-10-11 21:03:33] 2025-10-12 01:02:24,484 | INFO     | chi2: 5.725149450496643
[2025-10-11 21:03:33] 2025-10-12 01:02:24,485 | INFO     | sum of square deviations: 39697504665.66476
[2025-10-11 21:03:33] 2025-10-12 01:02:24,516 | INFO     | sum of deviations: 40789193008.89082
[2025-10-11 21:03:33] 2025-10-12 01:02:24,516 | INFO     | mean x: 1760215216.0813491
[2025-10-11 21:03:33] 2025-10-12 01:02:24,516 | INFO     | mean y: 2545371.8075396824
[2025-10-11 21:03:33] 2025-10-12 01:02:24,516 | INFO     | -- intersect: -1806076071.5455
[2025-10-11 21:03:33] 2025-10-12 01:02:24,517 | INFO     | intersect: -1806076071.5455
[2025-10-11 21:03:33] 2025-10-12 01:02:24,517 | INFO     | chi2: 3.5188859269156003
[2025-10-11 21:03:33] 2025-10-12 01:02:24,518 | INFO     | current chi2=3.5188859269156003 (change=38.53634813654785 %)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,518 | INFO     | sum of square deviations: 38527694303.46303
[2025-10-11 21:03:33] 2025-10-12 01:02:24,549 | INFO     | sum of deviations: 40245408725.408844
[2025-10-11 21:03:33] 2025-10-12 01:02:24,550 | INFO     | mean x: 1760215063.5811622
[2025-10-11 21:03:33] 2025-10-12 01:02:24,550 | INFO     | mean y: 2545300.915831663
[2025-10-11 21:03:33] 2025-10-12 01:02:24,550 | INFO     | -- intersect: -1836146994.5657058
[2025-10-11 21:03:33] 2025-10-12 01:02:24,550 | INFO     | intersect: -1836146994.5657058
[2025-10-11 21:03:33] 2025-10-12 01:02:24,563 | INFO     | chi2: 3.5192818918099853
[2025-10-11 21:03:33] 2025-10-12 01:02:24,564 | INFO     | current chi2=3.5192818918099853 (change=-0.011252564095820391 %)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,564 | INFO     | right removable region: 498
[2025-10-11 21:03:33] 2025-10-12 01:02:24,565 | INFO     | sum of square deviations: 39697386447.331406
[2025-10-11 21:03:33] 2025-10-12 01:02:24,586 | INFO     | sum of deviations: -195727740315.70834
[2025-10-11 21:03:33] 2025-10-12 01:02:24,599 | INFO     | mean x: 1760215521.0853174
[2025-10-11 21:03:33] 2025-10-12 01:02:24,599 | INFO     | mean y: 2549726.4583333335
[2025-10-11 21:03:33] 2025-10-12 01:02:24,599 | INFO     | -- intersect: 8681282440.204184
[2025-10-11 21:03:33] 2025-10-12 01:02:24,599 | INFO     | intersect: 8681282440.204184
[2025-10-11 21:03:33] 2025-10-12 01:02:24,600 | INFO     | chi2: 3.1035851443471603
[2025-10-11 21:03:33] 2025-10-12 01:02:24,601 | INFO     | current chi2=3.1035851443471603 (change=45.79032091331813 %)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,601 | INFO     | sum of square deviations: 38527611589.298546
[2025-10-11 21:03:33] 2025-10-12 01:02:24,632 | INFO     | sum of deviations: -235111649572.98587
[2025-10-11 21:03:33] 2025-10-12 01:02:24,632 | INFO     | mean x: 1760215673.5831664
[2025-10-11 21:03:33] 2025-10-12 01:02:24,633 | INFO     | mean y: 2554849.168336673
[2025-10-11 21:03:33] 2025-10-12 01:02:24,633 | INFO     | -- intersect: 10744129360.247377
[2025-10-11 21:03:33] 2025-10-12 01:02:24,633 | INFO     | intersect: 10744129360.247377
[2025-10-11 21:03:33] 2025-10-12 01:02:24,641 | INFO     | chi2: 2.8125566840820455
[2025-10-11 21:03:33] 2025-10-12 01:02:24,641 | INFO     | current chi2=2.8125566840820455 (change=9.377170167062797 %)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,641 | INFO     | left removable region: 20
[2025-10-11 21:03:33] 2025-10-12 01:02:24,642 | INFO     | sum of square deviations: 33865176530.309536
[2025-10-11 21:03:33] 2025-10-12 01:02:24,660 | INFO     | sum of deviations: -141270142172.6152
[2025-10-11 21:03:33] 2025-10-12 01:02:24,673 | INFO     | mean x: 1760215643.087866
[2025-10-11 21:03:33] 2025-10-12 01:02:24,673 | INFO     | mean y: 2569612.5146443513
[2025-10-11 21:03:33] 2025-10-12 01:02:24,673 | INFO     | -- intersect: 7345390162.436381
[2025-10-11 21:03:33] 2025-10-12 01:02:24,673 | INFO     | intersect: 7345390162.436381
[2025-10-11 21:03:33] 2025-10-12 01:02:24,674 | INFO     | chi2: 0.5055121300252589
[2025-10-11 21:03:33] 2025-10-12 01:02:24,674 | INFO     | -- intersect: 7345390162.436381
[2025-10-11 21:03:33] 2025-10-12 01:02:24,675 | INFO     | current memory leak: -4.17 B/s (using 478 data points, chi2=0.51)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | could have reported an average CPU frequency of 2487 MHz (20 samples)
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | ..............................
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | . Timing measurements:
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | . get job = 0 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | . initial setup = 9 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,676 | INFO     | . payload setup = 55 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,690 | INFO     | . stage-in = 0 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,690 | INFO     | . payload execution = 31051 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,690 | INFO     | . stage-out = 6 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,690 | INFO     | . log creation = 1 s
[2025-10-11 21:03:33] 2025-10-12 01:02:24,690 | INFO     | ..............................
[2025-10-11 21:03:33] 2025-10-12 01:02:24,698 | INFO     | time since job start (31256s) is within the limit (172800.0s)
[2025-10-11 21:03:33] 2025-10-12 01:02:25,066 | INFO     | 
[2025-10-11 21:03:33] 2025-10-12 01:02:25,066 | INFO     | job summary report
[2025-10-11 21:03:33] 2025-10-12 01:02:25,066 | INFO     | --------------------------------------------------
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | PanDA job id: 6838293342
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | task id: 46676269
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | errors: (none)
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | pilot state: finished 
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | transexitcode: 0
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | exeerrorcode: 0
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | exeerrordiag: 
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | exitcode: 0
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | exitmsg: OK
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | cpuconsumptiontime: 56674 s
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | nevents: 400
[2025-10-11 21:03:33] 2025-10-12 01:02:25,067 | INFO     | neventsw: 0
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | pid: 706860
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | pgrp: 706860
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | corecount: 9
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | event service: False
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348941, 5: 2348969, 16: 2349153, 27: 2349181, 38: 2349209, 44: 2349499, 50: 2349527, 31112: 2387913, 31
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | --------------------------------------------------
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | 
[2025-10-11 21:03:33] 2025-10-12 01:02:25,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 21:03:33] 2025-10-12 01:02:25,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:03:33] 2025-10-12 01:02:25,276 | INFO     | job 6838293342 has completed (purged errors)
[2025-10-11 21:03:33] 2025-10-12 01:02:25,276 | INFO     | overall cleanup function is called
[2025-10-11 21:03:33] 2025-10-12 01:02:26,306 | INFO     | --- collectZombieJob: --- 10, [706860]
[2025-10-11 21:03:33] 2025-10-12 01:02:26,306 | INFO     | zombie collector waiting for pid 706860
[2025-10-11 21:03:33] 2025-10-12 01:02:26,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:03:33] 2025-10-12 01:02:26,306 | INFO     | collected zombie processes
[2025-10-11 21:03:33] 2025-10-12 01:02:26,307 | INFO     | will attempt to kill all subprocesses of pid=706860
[2025-10-11 21:03:33] 2025-10-12 01:02:27,800 | INFO     | process IDs to be killed: [706860] (in reverse order)
[2025-10-11 21:03:33] 2025-10-12 01:02:28,320 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:03:33] 2025-10-12 01:02:28,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:03:33] 2025-10-12 01:02:28,361 | INFO     | did not find any defunct processes belonging to 706860
[2025-10-11 21:03:33] 2025-10-12 01:02:28,394 | INFO     | did not find any defunct processes belonging to 706860
[2025-10-11 21:03:33] 2025-10-12 01:02:28,399 | INFO     | ready for new job
[2025-10-11 21:03:33] 2025-10-12 01:02:28,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:03:33] 2025-10-12 01:02:28,409 | INFO     | ***************************************
[2025-10-11 21:03:33] 2025-10-12 01:02:28,409 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:03:33] 2025-10-12 01:02:28,409 | INFO     | ***************************************
[2025-10-11 21:03:33] 2025-10-12 01:02:28,410 | INFO     | 
[2025-10-11 21:03:33] 2025-10-12 01:02:28,427 | INFO     | architecture information:
[2025-10-11 21:03:33] 2025-10-12 01:02:28,427 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:03:33] 2025-10-12 01:02:28,712 | INFO     | cat /etc/os-release:
[2025-10-11 21:03:33] NAME="CentOS Linux"
[2025-10-11 21:03:33] VERSION="7 (Core)"
[2025-10-11 21:03:33] ID="centos"
[2025-10-11 21:03:33] ID_LIKE="rhel fedora"
[2025-10-11 21:03:33] VERSION_ID="7"
[2025-10-11 21:03:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:03:33] ANSI_COLOR="0;31"
[2025-10-11 21:03:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:03:33] HOME_URL="https://www.centos.org/"
[2025-10-11 21:03:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:03:33] 
[2025-10-11 21:03:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:03:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:03:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:03:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:03:33] 
[2025-10-11 21:03:33] 2025-10-12 01:02:28,713 | INFO     | ***************************************
[2025-10-11 21:03:33] 2025-10-12 01:02:29,216 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 21:03:33] 2025-10-12 01:02:29,315 | INFO     | sufficient remaining disk space (127453364224 B)
[2025-10-11 21:03:33] 2025-10-12 01:02:29,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:03:33] 2025-10-12 01:02:29,316 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:03:33] 2025-10-12 01:02:29,316 | INFO     | update_server=False
[2025-10-11 21:03:33] 2025-10-12 01:02:29,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:03:33] 2025-10-12 01:02:29,771 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:03:33] 2025-10-12 01:02:29,771 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:03:33] 2025-10-12 01:02:29,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:03:33] 2025-10-12 01:02:29,771 | INFO     | will abort loop
[2025-10-11 21:03:33] 2025-10-12 01:02:29,774 | INFO     | all data control threads have been joined
[2025-10-11 21:03:33] 2025-10-12 01:02:30,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:03:33] 2025-10-12 01:02:30,178 | INFO     | all job control threads have been joined
[2025-10-11 21:03:33] 2025-10-12 01:02:30,281 | INFO     | all payload control threads have been joined
[2025-10-11 21:03:33] 2025-10-12 01:02:30,323 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:30,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:03:33] 2025-10-12 01:02:30,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:30,777 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:30,780 | INFO     | [data] control thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,098 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,184 | INFO     | [job] control thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,208 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,287 | INFO     | [payload] control thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,377 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,382 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,435 | INFO     | [job] validate thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,568 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,740 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:31,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:03:33] 2025-10-12 01:02:32,585 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:35,793 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:03:33] 2025-10-12 01:02:58,581 | INFO     | PID=697078 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:03:33] 2025-10-12 01:02:58,582 | INFO     | .. there are 17 such processes running
[2025-10-11 21:03:33] 2025-10-12 01:02:58,583 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:03:33] 2025-10-12 01:02:58,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:03:33] 2025-10-12 01:02:58,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:03:33] 2025-10-12 01:03:23,883 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:03:33] 2025-10-12 01:03:24,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082244323136)>', '<ExcThread(monitor, started 140081742464768)>']
[2025-10-11 21:03:33] 2025-10-12 01:03:24,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:03:33] 2025-10-12 01:03:24,776 | INFO     | [monitor] control thread has ended
[2025-10-11 21:03:33] 2025-10-12 01:03:29,777 | INFO     | all workflow threads have been joined
[2025-10-11 21:03:33] 2025-10-12 01:03:29,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:03:33] 2025-10-12 01:03:29,778 | INFO     | traces error code: 0
[2025-10-11 21:03:33] 2025-10-12 01:03:29,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:03:33] 2025-10-12 01:03:31,076 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:03:33] 2025-10-12 01:03:31,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:03:33] 2025-10-12 01:03:31,178 [wrapper] pilotpid: 697078
[2025-10-11 21:03:33] 2025-10-12 01:03:31,217 [wrapper] Pilot exit status: 0
[2025-10-11 21:03:33] 2025-10-12 01:03:31,562 [wrapper] pandaids: 6838293342
[2025-10-11 21:03:33] 2025-10-12 01:03:32,327 [wrapper] cleanup supervisor_pilot 1677185 697079
[2025-10-11 21:03:33] 2025-10-12 01:03:32,367 [wrapper] Test setup, not cleaning
[2025-10-11 21:03:33] 2025-10-12 01:03:32,397 [wrapper] apfmon messages muted
[2025-10-11 21:03:33] 2025-10-12 01:03:32,420 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:03:33] 2025-10-12 01:03:32,441 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:03:33]  *** Error codes and diagnostics ***
[2025-10-11 21:03:33]     "exeErrorCode": 0,
[2025-10-11 21:03:33]     "exeErrorDiag": "",
[2025-10-11 21:03:33]     "pilotErrorCode": 0,
[2025-10-11 21:03:33]     "pilotErrorDiag": "",
[2025-10-11 21:03:33]  *** Listing of results directory ***
[2025-10-11 21:03:33] total 425060
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 05:19 pilot3.tar.gz
[2025-10-11 21:03:33] -rwx------. 1 boincer umatlas     36292 Oct 11 05:25 runpilot2-wrapper.sh
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:25 queuedata.json
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas       100 Oct 11 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:03:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 12:19 run_atlas
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas       105 Oct 11 12:19 job.xml
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas 220694963 Oct 11 12:19 EVNT.46676267._002217.pool.root.1
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:19 start_atlas.sh
[2025-10-11 21:03:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 12:19 shared
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 12:19 input.tar.gz
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas         0 Oct 11 12:19 boinc_lockfile
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 12:20 pandaJob.out
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas    975512 Oct 11 12:21 agis_schedconf.cvmfs.json
[2025-10-11 21:03:33] drwx------. 5 boincer umatlas      4096 Oct 11 12:21 pilot3
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas 201748216 Oct 11 20:58 HITS.46676269._055290.pool.root.1
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas       531 Oct 11 20:58 boinc_task_state.xml
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas      1046 Oct 11 21:01 memory_monitor_summary.json
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas    680589 Oct 11 21:01 log.46676269._055290.job.log.tgz.1
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas      7838 Oct 11 21:02 heartbeat.json
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas      6858 Oct 11 21:02 init_data.xml
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas        95 Oct 11 21:02 pilot_heartbeat.json
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas      5010 Oct 11 21:03 pilotlog.txt
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:03 boinc_mmap_file
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas   3774811 Oct 11 21:03 log.46676269._055290.job.log.1
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:03 wrapper_checkpoint.txt
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas       357 Oct 11 21:03 output.list
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:03 runtime_log
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas   4474880 Oct 11 21:03 result.tar.gz
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 21:03 runtime_log.err
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas       662 Oct 11 21:03 9oQODmz1kR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvcRMDmDVWzxn.diag
[2025-10-11 21:03:33] -rw-r--r--. 1 boincer umatlas     21064 Oct 11 21:03 stderr.txt
[2025-10-11 21:03:33] HITS file was successfully produced:
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas 201748216 Oct 11 20:58 shared/HITS.pool.root.1
[2025-10-11 21:03:33]  *** Contents of shared directory: ***
[2025-10-11 21:03:33] total 417500
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas 220694963 Oct 11 12:19 ATLAS.root_0
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:19 start_atlas.sh
[2025-10-11 21:03:33] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 12:19 input.tar.gz
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas 201748216 Oct 11 20:58 HITS.pool.root.1
[2025-10-11 21:03:33] -rw-------. 1 boincer umatlas   4474880 Oct 11 21:03 result.tar.gz
21:03:34 (690579): run_atlas exited; CPU time 58047.500421
21:03:34 (690579): called boinc_finish(0)

</stderr_txt>
]]>

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