Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:02:29 (1470707): wrapper (7.7.26015): starting
12:02:29 (1470707): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 12:02:29] Arguments: --nthreads 8
[2025-10-11 12:02:29] Threads: 8
[2025-10-11 12:02:29] Checking for CVMFS
[2025-10-11 12:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:02:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:02:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:02:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:02:32] 2.13.2.0 3526814 59203 377740 151589 1 434 30442912 32935937 35548 16776704 0 98974147 99.543 106425772 8095 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 12:02:32] CVMFS is ok
[2025-10-11 12:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:02:32] Further information can be found at the LHC@home message board.
[2025-10-11 12:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:02:32] Checking for apptainer binary...
[2025-10-11 12:02:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:02:32] Running /usr/bin/apptainer --version
[2025-10-11 12:02:33] apptainer version 1.4.3-1.el9
[2025-10-11 12:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:02:34] c6-12-25-2.aglt2.org
[2025-10-11 12:02:34] apptainer works
[2025-10-11 12:02:35] Set ATHENA_PROC_NUMBER=8
[2025-10-11 12:02:35] Set ATHENA_CORE_NUMBER=8
[2025-10-11 12:02:35] Starting ATLAS job with PandaID=6838290205
[2025-10-11 12:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:38:17]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:38:18] 2025-10-12 02:36:48,155 | INFO     | monitor loop #1192: job 0:6838290205 is in state 'finished'
[2025-10-11 22:38:18] 2025-10-12 02:36:48,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:38:18] 2025-10-12 02:36:48,266 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838290205/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:38:18] 2025-10-12 02:36:48,268 | INFO     | extracted standard info from prmon json
[2025-10-11 22:38:18] 2025-10-12 02:36:48,269 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:38:18] 2025-10-12 02:36:48,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:38:18] 2025-10-12 02:36:48,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:38:18] 2025-10-12 02:36:48,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:38:18] 2025-10-12 02:36:48,463 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:38:18] 2025-10-12 02:36:48,491 | INFO     | sum of square deviations: 72835296705.63379
[2025-10-11 22:38:18] 2025-10-12 02:36:48,629 | INFO     | sum of deviations: 595564853583.3092
[2025-10-11 22:38:18] 2025-10-12 02:36:48,653 | INFO     | mean x: 1760217717.4683955
[2025-10-11 22:38:18] 2025-10-12 02:36:48,654 | INFO     | mean y: 2026787.2722852512
[2025-10-11 22:38:18] 2025-10-12 02:36:48,654 | INFO     | -- intersect: -14391047101.27994
[2025-10-11 22:38:18] 2025-10-12 02:36:48,654 | INFO     | intersect: -14391047101.27994
[2025-10-11 22:38:18] 2025-10-12 02:36:48,657 | INFO     | chi2: 9.201737139638404
[2025-10-11 22:38:18] 2025-10-12 02:36:48,677 | INFO     | sum of square deviations: 71079092790.63213
[2025-10-11 22:38:18] 2025-10-12 02:36:48,904 | INFO     | sum of deviations: 687276015487.6223
[2025-10-11 22:38:18] 2025-10-12 02:36:48,905 | INFO     | mean x: 1760217564.97549
[2025-10-11 22:38:18] 2025-10-12 02:36:48,905 | INFO     | mean y: 2034724.8415032679
[2025-10-11 22:38:18] 2025-10-12 02:36:48,905 | INFO     | -- intersect: -17017812700.773355
[2025-10-11 22:38:18] 2025-10-12 02:36:48,905 | INFO     | intersect: -17017812700.773355
[2025-10-11 22:38:18] 2025-10-12 02:36:48,956 | INFO     | chi2: 7.1821904233606455
[2025-10-11 22:38:18] 2025-10-12 02:36:48,957 | INFO     | current chi2=7.1821904233606455 (change=21.94745063492565 %)
[2025-10-11 22:38:18] 2025-10-12 02:36:48,957 | INFO     | right removable region: 611
[2025-10-11 22:38:18] 2025-10-12 02:36:49,014 | INFO     | sum of square deviations: 71078802117.5817
[2025-10-11 22:38:18] 2025-10-12 02:36:49,274 | INFO     | sum of deviations: 448885238833.3198
[2025-10-11 22:38:18] 2025-10-12 02:36:49,364 | INFO     | mean x: 1760217869.9738562
[2025-10-11 22:38:18] 2025-10-12 02:36:49,364 | INFO     | mean y: 2039510.9575163398
[2025-10-11 22:38:18] 2025-10-12 02:36:49,364 | INFO     | -- intersect: -11114296097.15831
[2025-10-11 22:38:18] 2025-10-12 02:36:49,365 | INFO     | intersect: -11114296097.15831
[2025-10-11 22:38:18] 2025-10-12 02:36:49,367 | INFO     | chi2: 6.085489257699215
[2025-10-11 22:38:18] 2025-10-12 02:36:49,422 | INFO     | current chi2=6.085489257699215 (change=33.8658650497122 %)
[2025-10-11 22:38:18] 2025-10-12 02:36:49,424 | INFO     | sum of square deviations: 69350774045.49275
[2025-10-11 22:38:18] 2025-10-12 02:36:49,614 | INFO     | time since job start (37915s) is within the limit (172800.0s)
[2025-10-11 22:38:18] 2025-10-12 02:36:49,826 | INFO     | sum of deviations: 345327166848.45984
[2025-10-11 22:38:18] 2025-10-12 02:36:49,827 | INFO     | mean x: 1760218022.4794068
[2025-10-11 22:38:18] 2025-10-12 02:36:49,885 | INFO     | mean y: 2048651.276771005
[2025-10-11 22:38:18] 2025-10-12 02:36:49,886 | INFO     | -- intersect: -8762829767.234804
[2025-10-11 22:38:18] 2025-10-12 02:36:49,886 | INFO     | intersect: -8762829767.234804
[2025-10-11 22:38:18] 2025-10-12 02:36:49,889 | INFO     | chi2: 4.667390513131459
[2025-10-11 22:38:18] 2025-10-12 02:36:49,951 | INFO     | current chi2=4.667390513131459 (change=23.302953707027108 %)
[2025-10-11 22:38:18] 2025-10-12 02:36:49,952 | INFO     | left removable region: 20
[2025-10-11 22:38:18] 2025-10-12 02:36:49,954 | INFO     | sum of square deviations: 64009996255.74921
[2025-10-11 22:38:18] 2025-10-12 02:36:50,317 | INFO     | sum of deviations: 292306739805.02026
[2025-10-11 22:38:18] 2025-10-12 02:36:50,318 | INFO     | mean x: 1760218144.499154
[2025-10-11 22:38:18] 2025-10-12 02:36:50,318 | INFO     | mean y: 2070087.0406091372
[2025-10-11 22:38:18] 2025-10-12 02:36:50,319 | INFO     | -- intersect: -8036106092.636587
[2025-10-11 22:38:18] 2025-10-12 02:36:50,319 | INFO     | intersect: -8036106092.636587
[2025-10-11 22:38:18] 2025-10-12 02:36:50,350 | INFO     | chi2: 1.2990770403215357
[2025-10-11 22:38:18] 2025-10-12 02:36:50,351 | INFO     | -- intersect: -8036106092.636587
[2025-10-11 22:38:18] 2025-10-12 02:36:50,383 | INFO     | current memory leak: 4.57 B/s (using 591 data points, chi2=1.30)
[2025-10-11 22:38:18] 2025-10-12 02:36:50,394 | INFO     | could have reported an average CPU frequency of 999 MHz (24 samples)
[2025-10-11 22:38:18] 2025-10-12 02:36:50,394 | INFO     | ..............................
[2025-10-11 22:38:18] 2025-10-12 02:36:50,395 | INFO     | . Timing measurements:
[2025-10-11 22:38:18] 2025-10-12 02:36:50,395 | INFO     | . get job = 1 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,395 | INFO     | . initial setup = 25 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,396 | INFO     | . payload setup = 72 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,396 | INFO     | . stage-in = 2 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,420 | INFO     | . payload execution = 37631 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,421 | INFO     | . stage-out = 21 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,421 | INFO     | . log creation = 3 s
[2025-10-11 22:38:18] 2025-10-12 02:36:50,421 | INFO     | ..............................
[2025-10-11 22:38:18] 2025-10-12 02:36:54,169 | INFO     | 
[2025-10-11 22:38:18] 2025-10-12 02:36:54,179 | INFO     | job summary report
[2025-10-11 22:38:18] 2025-10-12 02:36:54,180 | INFO     | --------------------------------------------------
[2025-10-11 22:38:18] 2025-10-12 02:36:54,180 | INFO     | PanDA job id: 6838290205
[2025-10-11 22:38:18] 2025-10-12 02:36:54,180 | INFO     | task id: 46676269
[2025-10-11 22:38:18] 2025-10-12 02:36:54,181 | INFO     | errors: (none)
[2025-10-11 22:38:18] 2025-10-12 02:36:54,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:38:18] 2025-10-12 02:36:54,181 | INFO     | pilot state: finished 
[2025-10-11 22:38:18] 2025-10-12 02:36:54,181 | INFO     | transexitcode: 0
[2025-10-11 22:38:18] 2025-10-12 02:36:54,182 | INFO     | exeerrorcode: 0
[2025-10-11 22:38:18] 2025-10-12 02:36:54,182 | INFO     | exeerrordiag: 
[2025-10-11 22:38:18] 2025-10-12 02:36:54,189 | INFO     | exitcode: 0
[2025-10-11 22:38:18] 2025-10-12 02:36:54,190 | INFO     | exitmsg: OK
[2025-10-11 22:38:18] 2025-10-12 02:36:54,190 | INFO     | cpuconsumptiontime: 110339 s
[2025-10-11 22:38:18] 2025-10-12 02:36:54,190 | INFO     | nevents: 400
[2025-10-11 22:38:18] 2025-10-12 02:36:54,190 | INFO     | neventsw: 0
[2025-10-11 22:38:18] 2025-10-12 02:36:54,191 | INFO     | pid: 1520404
[2025-10-11 22:38:18] 2025-10-12 02:36:54,191 | INFO     | pgrp: 1520404
[2025-10-11 22:38:18] 2025-10-12 02:36:54,272 | INFO     | corecount: 8
[2025-10-11 22:38:18] 2025-10-12 02:36:54,273 | INFO     | event service: False
[2025-10-11 22:38:18] 2025-10-12 02:36:54,273 | INFO     | sizes: {0: 2348630, 2: 2348686, 9: 2348714, 14: 2348913, 19: 2348941, 23: 2348969, 38: 2349125, 50: 2349153, 58: 2349443, 65: 2349471, 37711: 2387814, 37719: 23880
[2025-10-11 22:38:18] 2025-10-12 02:36:54,274 | INFO     | --------------------------------------------------
[2025-10-11 22:38:18] 2025-10-12 02:36:54,274 | INFO     | 
[2025-10-11 22:38:18] 2025-10-12 02:36:54,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 22:38:18] 2025-10-12 02:36:54,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,492 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:38:18] 2025-10-12 02:36:54,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:38:18] 2025-10-12 02:36:54,493 | INFO     | job 6838290205 has completed (purged errors)
[2025-10-11 22:38:18] 2025-10-12 02:36:54,493 | INFO     | overall cleanup function is called
[2025-10-11 22:38:18] 2025-10-12 02:36:55,698 | INFO     | --- collectZombieJob: --- 10, [1520404]
[2025-10-11 22:38:18] 2025-10-12 02:36:55,699 | INFO     | zombie collector waiting for pid 1520404
[2025-10-11 22:38:18] 2025-10-12 02:36:55,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:38:18] 2025-10-12 02:36:55,699 | INFO     | collected zombie processes
[2025-10-11 22:38:18] 2025-10-12 02:36:55,700 | INFO     | will attempt to kill all subprocesses of pid=1520404
[2025-10-11 22:38:18] 2025-10-12 02:37:09,138 | INFO     | PID=1487951 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:38:18] 2025-10-12 02:37:09,150 | INFO     | .. there are 39 such processes running
[2025-10-11 22:38:18] 2025-10-12 02:37:09,286 | INFO     | process IDs to be killed: [1520404] (in reverse order)
[2025-10-11 22:38:18] 2025-10-12 02:37:11,408 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:38:18] 2025-10-12 02:37:11,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:38:18] 2025-10-12 02:37:11,617 | INFO     | did not find any defunct processes belonging to 1520404
[2025-10-11 22:38:18] 2025-10-12 02:37:11,778 | INFO     | did not find any defunct processes belonging to 1520404
[2025-10-11 22:38:18] 2025-10-12 02:37:11,779 | INFO     | ready for new job
[2025-10-11 22:38:18] 2025-10-12 02:37:11,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:38:18] 2025-10-12 02:37:11,801 | INFO     | ***************************************
[2025-10-11 22:38:18] 2025-10-12 02:37:11,802 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:38:18] 2025-10-12 02:37:11,802 | INFO     | ***************************************
[2025-10-11 22:38:18] 2025-10-12 02:37:11,802 | INFO     | 
[2025-10-11 22:38:18] 2025-10-12 02:37:11,856 | INFO     | architecture information:
[2025-10-11 22:38:18] 2025-10-12 02:37:11,871 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:38:18] 2025-10-12 02:37:12,037 | INFO     | cat /etc/os-release:
[2025-10-11 22:38:18] NAME="CentOS Linux"
[2025-10-11 22:38:18] VERSION="7 (Core)"
[2025-10-11 22:38:18] ID="centos"
[2025-10-11 22:38:18] ID_LIKE="rhel fedora"
[2025-10-11 22:38:18] VERSION_ID="7"
[2025-10-11 22:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:38:18] ANSI_COLOR="0;31"
[2025-10-11 22:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:38:18] HOME_URL="https://www.centos.org/"
[2025-10-11 22:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:38:18] 
[2025-10-11 22:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:38:18] 
[2025-10-11 22:38:18] 2025-10-12 02:37:12,038 | INFO     | ***************************************
[2025-10-11 22:38:18] 2025-10-12 02:37:12,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 22:38:18] 2025-10-12 02:37:12,703 | INFO     | sufficient remaining disk space (93667196928 B)
[2025-10-11 22:38:18] 2025-10-12 02:37:12,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:38:18] 2025-10-12 02:37:12,705 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:38:18] 2025-10-12 02:37:12,705 | INFO     | update_server=False
[2025-10-11 22:38:18] 2025-10-12 02:37:12,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:38:18] 2025-10-12 02:37:12,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:38:18] 2025-10-12 02:37:12,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:38:18] 2025-10-12 02:37:12,724 | INFO     | aborting loop
[2025-10-11 22:38:18] 2025-10-12 02:37:12,776 | INFO     | all payload control threads have been joined
[2025-10-11 22:38:18] 2025-10-12 02:37:13,335 | INFO     | all data control threads have been joined
[2025-10-11 22:38:18] 2025-10-12 02:37:13,711 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,731 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,734 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,766 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,784 | INFO     | [payload] control thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:38:18] 2025-10-12 02:37:13,974 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:13,986 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:14,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:38:18] 2025-10-12 02:37:14,343 | INFO     | [data] control thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:14,344 | INFO     | all job control threads have been joined
[2025-10-11 22:38:18] 2025-10-12 02:37:14,480 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:14,901 | INFO     | [job] validate thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:14,975 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:15,124 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:15,350 | INFO     | [job] control thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:15,963 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:18,348 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:38:18] 2025-10-12 02:37:51,298 | INFO     | PID=1487951 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:38:18] 2025-10-12 02:37:51,299 | INFO     | .. there are 39 such processes running
[2025-10-11 22:38:18] 2025-10-12 02:37:51,305 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:38:18] 2025-10-12 02:37:51,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:38:18] 2025-10-12 02:37:51,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:38:18] 2025-10-12 02:38:07,864 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:38:18] 2025-10-12 02:38:09,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406126036800)>', '<ExcThread(monitor, started 140405500802816)>']
[2025-10-11 22:38:18] 2025-10-12 02:38:09,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:38:18] 2025-10-12 02:38:09,484 | INFO     | [monitor] control thread has ended
[2025-10-11 22:38:18] 2025-10-12 02:38:14,317 | INFO     | all workflow threads have been joined
[2025-10-11 22:38:18] 2025-10-12 02:38:14,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:38:18] 2025-10-12 02:38:14,319 | INFO     | traces error code: 0
[2025-10-11 22:38:18] 2025-10-12 02:38:14,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:38:18] 2025-10-12 02:38:16,101 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:38:18] 2025-10-12 02:38:16,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:38:18] 2025-10-12 02:38:16,217 [wrapper] pilotpid: 1487951
[2025-10-11 22:38:18] 2025-10-12 02:38:16,262 [wrapper] Pilot exit status: 0
[2025-10-11 22:38:18] 2025-10-12 02:38:16,377 [wrapper] pandaids: 6838290205
[2025-10-11 22:38:18] 2025-10-12 02:38:16,857 [wrapper] cleanup supervisor_pilot 3271763 1487952
[2025-10-11 22:38:18] 2025-10-12 02:38:16,897 [wrapper] Test setup, not cleaning
[2025-10-11 22:38:18] 2025-10-12 02:38:16,955 [wrapper] apfmon messages muted
[2025-10-11 22:38:18] 2025-10-12 02:38:16,996 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:38:18] 2025-10-12 02:38:17,034 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:38:18]  *** Error codes and diagnostics ***
[2025-10-11 22:38:18]     "exeErrorCode": 0,
[2025-10-11 22:38:18]     "exeErrorDiag": "",
[2025-10-11 22:38:18]     "pilotErrorCode": 0,
[2025-10-11 22:38:18]     "pilotErrorDiag": "",
[2025-10-11 22:38:18]  *** Listing of results directory ***
[2025-10-11 22:38:18] total 414972
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 04:40 pilot3.tar.gz
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 05:02 queuedata.json
[2025-10-11 22:38:18] -rwx------. 1 boincer umatlas     36292 Oct 11 05:02 runpilot2-wrapper.sh
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas       100 Oct 11 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:38:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 12:02 run_atlas
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas       105 Oct 11 12:02 job.xml
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas 221780620 Oct 11 12:02 EVNT.46676267._002196.pool.root.1
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:02 start_atlas.sh
[2025-10-11 22:38:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 12:02 shared
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 12:02 input.tar.gz
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas         0 Oct 11 12:02 boinc_lockfile
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 12:02 pandaJob.out
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas    975512 Oct 11 12:04 agis_schedconf.cvmfs.json
[2025-10-11 22:38:18] drwx------. 5 boincer umatlas      4096 Oct 11 12:04 pilot3
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas      6861 Oct 11 22:27 init_data.xml
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas 191805135 Oct 11 22:32 HITS.46676269._054758.pool.root.1
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas       532 Oct 11 22:32 boinc_task_state.xml
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas      1044 Oct 11 22:35 memory_monitor_summary.json
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:35 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas    639107 Oct 11 22:35 log.46676269._054758.job.log.tgz.1
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas      7844 Oct 11 22:36 heartbeat.json
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas        29 Oct 11 22:37 wrapper_checkpoint.txt
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas        95 Oct 11 22:37 pilot_heartbeat.json
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas      4824 Oct 11 22:38 pilotlog.txt
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas   3077060 Oct 11 22:38 log.46676269._054758.job.log.1
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas       357 Oct 11 22:38 output.list
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:38 runtime_log
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas   3737600 Oct 11 22:38 result.tar.gz
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 22:38 runtime_log.err
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas       664 Oct 11 22:38 PUFLDmLgkR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSbRMDmv2iM9n.diag
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas     21337 Oct 11 22:38 stderr.txt
[2025-10-11 22:38:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:38 boinc_mmap_file
[2025-10-11 22:38:18] HITS file was successfully produced:
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas 191805135 Oct 11 22:32 shared/HITS.pool.root.1
[2025-10-11 22:38:18]  *** Contents of shared directory: ***
[2025-10-11 22:38:18] total 408132
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas 221780620 Oct 11 12:02 ATLAS.root_0
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:02 start_atlas.sh
[2025-10-11 22:38:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 12:02 input.tar.gz
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas 191805135 Oct 11 22:32 HITS.pool.root.1
[2025-10-11 22:38:18] -rw-------. 1 boincer umatlas   3737600 Oct 11 22:38 result.tar.gz
22:38:19 (1470707): run_atlas exited; CPU time 113344.346697
22:38:19 (1470707): called boinc_finish(0)

</stderr_txt>
]]>

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