Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:51:41 (780038): wrapper (7.7.26015): starting
11:51:41 (780038): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 11:51:41] Arguments: --nthreads 8
[2025-10-11 11:51:41] Threads: 8
[2025-10-11 11:51:41] Checking for CVMFS
[2025-10-11 11:51:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 11:51:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 11:51:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 11:51:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 11:51:42] 2.13.2.0 141135 115841 342304 151589 2 155 36512786 39288833 10918 16776704 0 94367213 99.550 111047030 34096 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 11:51:42] CVMFS is ok
[2025-10-11 11:51:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 11:51:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 11:51:42] Further information can be found at the LHC@home message board.
[2025-10-11 11:51:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 11:51:42] Checking for apptainer binary...
[2025-10-11 11:51:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 11:51:42] Running /usr/bin/apptainer --version
[2025-10-11 11:51:42] apptainer version 1.4.3-1.el9
[2025-10-11 11:51:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 11:51:42] c-210-4.aglt2.org
[2025-10-11 11:51:42] apptainer works
[2025-10-11 11:51:42] Set ATHENA_PROC_NUMBER=8
[2025-10-11 11:51:42] Set ATHENA_CORE_NUMBER=8
[2025-10-11 11:51:42] Starting ATLAS job with PandaID=6837961893
[2025-10-11 11:51:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:11:17]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:11:17] 2025-10-11 18:10:23,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:11:17] 2025-10-11 18:10:23,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:11:17] 2025-10-11 18:10:23,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:11:17] 2025-10-11 18:10:23,317 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:11:17] 2025-10-11 18:10:23,317 | INFO     | sum of square deviations: 779958079.9705864
[2025-10-11 14:11:17] 2025-10-11 18:10:23,318 | INFO     | sum of deviations: -10425894097.000004
[2025-10-11 14:11:17] 2025-10-11 18:10:23,318 | INFO     | mean x: 1760202065.514706
[2025-10-11 14:11:17] 2025-10-11 18:10:23,318 | INFO     | mean y: 2529511.5
[2025-10-11 14:11:17] 2025-10-11 18:10:23,318 | INFO     | -- intersect: 23531589336.188347
[2025-10-11 14:11:17] 2025-10-11 18:10:23,318 | INFO     | intersect: 23531589336.188347
[2025-10-11 14:11:17] 2025-10-11 18:10:23,319 | INFO     | chi2: 2.2339011891671188
[2025-10-11 14:11:17] 2025-10-11 18:10:23,319 | INFO     | sum of square deviations: 697054809.9694679
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | sum of deviations: -1187935307.0152655
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | mean x: 1760201913.0152671
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | mean y: 2546031.007633588
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | -- intersect: 3002318746.209525
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | intersect: 3002318746.209525
[2025-10-11 14:11:17] 2025-10-11 18:10:23,320 | INFO     | chi2: 1.5369467326692254
[2025-10-11 14:11:17] 2025-10-11 18:10:23,321 | INFO     | current chi2=1.5369467326692254 (change=31.19898319037754 %)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,321 | INFO     | sum of square deviations: 620244677.4682542
[2025-10-11 14:11:17] 2025-10-11 18:10:23,321 | INFO     | sum of deviations: -821603458.1428579
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | mean x: 1760201760.515873
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | mean y: 2546758.5714285714
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | -- intersect: 2334187651.2786584
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | intersect: 2334187651.2786584
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | chi2: 1.5379169048560433
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | current chi2=1.5379169048560433 (change=-0.06312334488866286 %)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,322 | INFO     | right removable region: 125
[2025-10-11 14:11:17] 2025-10-11 18:10:23,323 | INFO     | sum of square deviations: 697053589.9694679
[2025-10-11 14:11:17] 2025-10-11 18:10:23,323 | INFO     | sum of deviations: -28078641926.656475
[2025-10-11 14:11:17] 2025-10-11 18:10:23,323 | INFO     | mean x: 1760202218.0152671
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | mean y: 2561313.328244275
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | -- intersect: 70906848314.16281
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | intersect: 70906848314.16281
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | chi2: 0.9191596086977798
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | current chi2=0.9191596086977798 (change=58.854061533470215 %)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,324 | INFO     | sum of square deviations: 620242237.4682542
[2025-10-11 14:11:17] 2025-10-11 18:10:23,325 | INFO     | sum of deviations: -24298069790.24603
[2025-10-11 14:11:17] 2025-10-11 18:10:23,325 | INFO     | mean x: 1760202370.515873
[2025-10-11 14:11:17] 2025-10-11 18:10:23,325 | INFO     | mean y: 2553691.373015873
[2025-10-11 14:11:17] 2025-10-11 18:10:23,325 | INFO     | -- intersect: 68958708980.52365
[2025-10-11 14:11:17] 2025-10-11 18:10:23,325 | INFO     | intersect: 68958708980.52365
[2025-10-11 14:11:17] 2025-10-11 18:10:23,326 | INFO     | chi2: 0.901735552983037
[2025-10-11 14:11:17] 2025-10-11 18:10:23,326 | INFO     | current chi2=0.901735552983037 (change=1.8956507172272683 %)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,326 | INFO     | left removable region: 20
[2025-10-11 14:11:17] 2025-10-11 18:10:23,326 | INFO     | sum of square deviations: 358925831.9619045
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | sum of deviations: -2134452878.8857157
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | mean x: 1760202340.0190477
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | mean y: 2541928.942857143
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | -- intersect: 10470077607.661562
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | intersect: 10470077607.661562
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | chi2: 0.045465859464228736
[2025-10-11 14:11:17] 2025-10-11 18:10:23,327 | INFO     | -- intersect: 10470077607.661562
[2025-10-11 14:11:17] 2025-10-11 18:10:23,328 | INFO     | current memory leak: -5.95 B/s (using 105 data points, chi2=0.05)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,328 | INFO     | could have reported an average CPU frequency of 2599 MHz (8 samples)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,328 | INFO     | ..............................
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . Timing measurements:
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . get job = 0 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . initial setup = 2 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . payload setup = 7 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . stage-in = 0 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . payload execution = 8257 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . stage-out = 3 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | . log creation = 0 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,329 | INFO     | ..............................
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | 
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | job summary report
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | --------------------------------------------------
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | PanDA job id: 6837961893
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | task id: 46676269
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | errors: (none)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:11:17] 2025-10-11 18:10:23,639 | INFO     | pilot state: finished 
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | transexitcode: 0
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | exeerrorcode: 0
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | exeerrordiag: 
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | exitcode: 0
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | exitmsg: OK
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | cpuconsumptiontime: 50840 s
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | nevents: 400
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | neventsw: 0
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | pid: 794078
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | pgrp: 794078
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | corecount: 8
[2025-10-11 14:11:17] 2025-10-11 18:10:23,640 | INFO     | event service: False
[2025-10-11 14:11:17] 2025-10-11 18:10:23,641 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 8269: 2376852, 8275: 2385850, 8278: 2385906, 8289: 2386228}
[2025-10-11 14:11:17] 2025-10-11 18:10:23,641 | INFO     | --------------------------------------------------
[2025-10-11 14:11:17] 2025-10-11 18:10:23,641 | INFO     | 
[2025-10-11 14:11:17] 2025-10-11 18:10:23,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 14:11:17] 2025-10-11 18:10:23,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:11:17] 2025-10-11 18:10:23,710 | INFO     | job 6837961893 has completed (purged errors)
[2025-10-11 14:11:17] 2025-10-11 18:10:23,710 | INFO     | overall cleanup function is called
[2025-10-11 14:11:17] 2025-10-11 18:10:24,723 | INFO     | --- collectZombieJob: --- 10, [794078]
[2025-10-11 14:11:17] 2025-10-11 18:10:24,723 | INFO     | zombie collector waiting for pid 794078
[2025-10-11 14:11:17] 2025-10-11 18:10:24,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:11:17] 2025-10-11 18:10:24,723 | INFO     | collected zombie processes
[2025-10-11 14:11:17] 2025-10-11 18:10:24,724 | INFO     | will attempt to kill all subprocesses of pid=794078
[2025-10-11 14:11:17] 2025-10-11 18:10:25,911 | INFO     | process IDs to be killed: [794078] (in reverse order)
[2025-10-11 14:11:17] 2025-10-11 18:10:26,308 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:11:17] 2025-10-11 18:10:26,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:11:17] 2025-10-11 18:10:26,331 | INFO     | did not find any defunct processes belonging to 794078
[2025-10-11 14:11:17] 2025-10-11 18:10:26,349 | INFO     | did not find any defunct processes belonging to 794078
[2025-10-11 14:11:17] 2025-10-11 18:10:26,350 | INFO     | ready for new job
[2025-10-11 14:11:17] 2025-10-11 18:10:26,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:11:17] 2025-10-11 18:10:26,356 | INFO     | ***************************************
[2025-10-11 14:11:17] 2025-10-11 18:10:26,356 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:11:17] 2025-10-11 18:10:26,356 | INFO     | ***************************************
[2025-10-11 14:11:17] 2025-10-11 18:10:26,357 | INFO     | 
[2025-10-11 14:11:17] 2025-10-11 18:10:26,359 | INFO     | architecture information:
[2025-10-11 14:11:17] 2025-10-11 18:10:26,363 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:11:17] 2025-10-11 18:10:26,427 | INFO     | cat /etc/os-release:
[2025-10-11 14:11:17] NAME="CentOS Linux"
[2025-10-11 14:11:17] VERSION="7 (Core)"
[2025-10-11 14:11:17] ID="centos"
[2025-10-11 14:11:17] ID_LIKE="rhel fedora"
[2025-10-11 14:11:17] VERSION_ID="7"
[2025-10-11 14:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:11:17] ANSI_COLOR="0;31"
[2025-10-11 14:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:11:17] HOME_URL="https://www.centos.org/"
[2025-10-11 14:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:11:17] 
[2025-10-11 14:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:11:17] 
[2025-10-11 14:11:17] 2025-10-11 18:10:26,428 | INFO     | ***************************************
[2025-10-11 14:11:17] 2025-10-11 18:10:26,932 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 14:11:17] 2025-10-11 18:10:27,026 | INFO     | sufficient remaining disk space (52357496832 B)
[2025-10-11 14:11:17] 2025-10-11 18:10:27,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:11:17] 2025-10-11 18:10:27,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:11:17] 2025-10-11 18:10:27,027 | INFO     | update_server=False
[2025-10-11 14:11:17] 2025-10-11 18:10:27,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:11:17] 2025-10-11 18:10:27,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:11:17] 2025-10-11 18:10:27,028 | INFO     | aborting loop
[2025-10-11 14:11:17] 2025-10-11 18:10:27,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:11:17] 2025-10-11 18:10:27,510 | INFO     | all job control threads have been joined
[2025-10-11 14:11:17] 2025-10-11 18:10:27,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:11:17] 2025-10-11 18:10:28,032 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,036 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,109 | INFO     | all data control threads have been joined
[2025-10-11 14:11:17] 2025-10-11 18:10:28,221 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,241 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,242 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,450 | INFO     | all payload control threads have been joined
[2025-10-11 14:11:17] 2025-10-11 18:10:28,516 | INFO     | [job] control thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,620 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:11:17] 2025-10-11 18:10:28,954 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:28,955 | INFO     | [job] validate thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,116 | INFO     | [data] control thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,149 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,457 | INFO     | [payload] control thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,582 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:29,675 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:31,083 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:11:17] 2025-10-11 18:10:57,831 | INFO     | PID=784388 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 14:11:17] 2025-10-11 18:10:57,831 | INFO     | .. there are 15 such processes running
[2025-10-11 14:11:17] 2025-10-11 18:10:57,832 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:11:17] 2025-10-11 18:10:57,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:11:17] 2025-10-11 18:10:57,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:11:17] 2025-10-11 18:11:10,393 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:11:17] 2025-10-11 18:11:11,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160099403584)>', '<ExcThread(monitor, started 140159454529280)>']
[2025-10-11 14:11:17] 2025-10-11 18:11:11,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:11:17] 2025-10-11 18:11:11,920 | INFO     | [monitor] control thread has ended
[2025-10-11 14:11:17] 2025-10-11 18:11:16,368 | INFO     | all workflow threads have been joined
[2025-10-11 14:11:17] 2025-10-11 18:11:16,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:11:17] 2025-10-11 18:11:16,369 | INFO     | traces error code: 0
[2025-10-11 14:11:17] 2025-10-11 18:11:16,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:11:17] 2025-10-11 18:11:16,758 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:11:17] 2025-10-11 18:11:16,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:11:17] 2025-10-11 18:11:16,821 [wrapper] pilotpid: 784388
[2025-10-11 14:11:17] 2025-10-11 18:11:16,841 [wrapper] Pilot exit status: 0
[2025-10-11 14:11:17] 2025-10-11 18:11:16,934 [wrapper] pandaids: 6837961893
[2025-10-11 14:11:17] 2025-10-11 18:11:17,052 [wrapper] cleanup supervisor_pilot 1071527 784389
[2025-10-11 14:11:17] 2025-10-11 18:11:17,073 [wrapper] Test setup, not cleaning
[2025-10-11 14:11:17] 2025-10-11 18:11:17,092 [wrapper] apfmon messages muted
[2025-10-11 14:11:17] 2025-10-11 18:11:17,120 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:11:17] 2025-10-11 18:11:17,150 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:11:17]  *** Error codes and diagnostics ***
[2025-10-11 14:11:17]     "exeErrorCode": 0,
[2025-10-11 14:11:17]     "exeErrorDiag": "",
[2025-10-11 14:11:17]     "pilotErrorCode": 0,
[2025-10-11 14:11:17]     "pilotErrorDiag": "",
[2025-10-11 14:11:17]  *** Listing of results directory ***
[2025-10-11 14:11:17] total 414752
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 22:49 queuedata.json
[2025-10-11 14:11:17] -rwx------. 1 boincer umatlas     36292 Oct 10 22:50 runpilot2-wrapper.sh
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 22:50 pilot3.tar.gz
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas       100 Oct 11 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:11:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 11:51 run_atlas
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas       105 Oct 11 11:51 job.xml
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas 220284211 Oct 11 11:51 EVNT.46676267._002000.pool.root.1
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 11:51 start_atlas.sh
[2025-10-11 14:11:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 11:51 shared
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 11:51 input.tar.gz
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas         0 Oct 11 11:51 boinc_lockfile
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 11:51 pandaJob.out
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas    975512 Oct 11 11:51 agis_schedconf.cvmfs.json
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas   1560580 Oct 11 11:51 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:11:17] drwx------. 5 boincer umatlas      4096 Oct 11 11:51 pilot3
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas 197447521 Oct 11 14:09 HITS.46676269._049627.pool.root.1
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas       529 Oct 11 14:09 boinc_task_state.xml
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas      6658 Oct 11 14:09 init_data.xml
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas      1045 Oct 11 14:09 memory_monitor_summary.json
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas    374668 Oct 11 14:10 log.46676269._049627.job.log.tgz.1
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas      7819 Oct 11 14:10 heartbeat.json
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas        95 Oct 11 14:10 pilot_heartbeat.json
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 14:11 boinc_mmap_file
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas        27 Oct 11 14:11 wrapper_checkpoint.txt
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas      4823 Oct 11 14:11 pilotlog.txt
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas   1161332 Oct 11 14:11 log.46676269._049627.job.log.1
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas       357 Oct 11 14:11 output.list
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas       620 Oct 11 14:11 runtime_log
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas   1556480 Oct 11 14:11 result.tar.gz
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 14:11 runtime_log.err
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas       651 Oct 11 14:11 65LMDmTreR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9zQMDmrapzAn.diag
[2025-10-11 14:11:17] -rw-r--r--. 1 boincer umatlas     20946 Oct 11 14:11 stderr.txt
[2025-10-11 14:11:17] HITS file was successfully produced:
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas 197447521 Oct 11 14:09 shared/HITS.pool.root.1
[2025-10-11 14:11:17]  *** Contents of shared directory: ***
[2025-10-11 14:11:17] total 410044
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas 220284211 Oct 11 11:51 ATLAS.root_0
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 11:51 start_atlas.sh
[2025-10-11 14:11:17] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 11:51 input.tar.gz
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas 197447521 Oct 11 14:09 HITS.pool.root.1
[2025-10-11 14:11:17] -rw-------. 1 boincer umatlas   1556480 Oct 11 14:11 result.tar.gz
14:11:18 (780038): run_atlas exited; CPU time 51014.755554
14:11:18 (780038): called boinc_finish(0)

</stderr_txt>
]]>

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