Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:09:26 (22012): wrapper (7.7.26015): starting
10:09:26 (22012): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:09:26] Arguments: --nthreads 8
[2025-10-11 10:09:26] Threads: 8
[2025-10-11 10:09:26] Checking for CVMFS
[2025-10-11 10:09:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:09:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:09:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:09:26] 2.11.2.0 3026 12472 78920 151586 1 56 11857726 20275201 1 130560 0 7901874 99.989 412951 35996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:09:26] CVMFS is ok
[2025-10-11 10:09:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:09:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:09:26] Further information can be found at the LHC@home message board.
[2025-10-11 10:09:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:09:26] Checking for apptainer binary...
[2025-10-11 10:09:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:09:26] Running /usr/bin/apptainer --version
[2025-10-11 10:09:26] apptainer version 1.3.2-1.el7
[2025-10-11 10:09:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:09:28] c-204-25.aglt2.org
[2025-10-11 10:09:28] apptainer works
[2025-10-11 10:09:28] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:09:28] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:09:28] Starting ATLAS job with PandaID=6838231948
[2025-10-11 10:09:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:13:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:13:03] 2025-10-11 16:12:22,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:13:03] 2025-10-11 16:12:22,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:13:03] 2025-10-11 16:12:22,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:13:03] 2025-10-11 16:12:22,740 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:13:03] 2025-10-11 16:12:22,741 | INFO     | sum of square deviations: 535786790.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,741 | INFO     | sum of deviations: 17704931061.500008
[2025-10-11 12:13:03] 2025-10-11 16:12:22,741 | INFO     | mean x: 1760195446.5
[2025-10-11 12:13:03] 2025-10-11 16:12:22,741 | INFO     | mean y: 2499320.8916666666
[2025-10-11 12:13:03] 2025-10-11 16:12:22,742 | INFO     | -- intersect: -58162688057.18596
[2025-10-11 12:13:03] 2025-10-11 16:12:22,742 | INFO     | intersect: -58162688057.18596
[2025-10-11 12:13:03] 2025-10-11 16:12:22,742 | INFO     | chi2: 1.3905235870644355
[2025-10-11 12:13:03] 2025-10-11 16:12:22,742 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,743 | INFO     | sum of deviations: 17023538827.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,743 | INFO     | mean x: 1760195294.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,743 | INFO     | mean y: 2497701.8521739133
[2025-10-11 12:13:03] 2025-10-11 16:12:22,743 | INFO     | -- intersect: -63541070187.7027
[2025-10-11 12:13:03] 2025-10-11 16:12:22,743 | INFO     | intersect: -63541070187.7027
[2025-10-11 12:13:03] 2025-10-11 16:12:22,744 | INFO     | chi2: 1.39158684347399
[2025-10-11 12:13:03] 2025-10-11 16:12:22,744 | INFO     | current chi2=1.39158684347399 (change=-0.07646446413751079 %)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,744 | INFO     | right removable region: 114
[2025-10-11 12:13:03] 2025-10-11 16:12:22,744 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | sum of deviations: 562571768.0000002
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | mean x: 1760195599.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | mean y: 2539201.4260869566
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | -- intersect: -2097366340.552318
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | intersect: -2097366340.552318
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | chi2: 0.03058733842803113
[2025-10-11 12:13:03] 2025-10-11 16:12:22,745 | INFO     | current chi2=0.03058733842803113 (change=97.80030064124229 %)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,746 | INFO     | sum of square deviations: 412686807.5
[2025-10-11 12:13:03] 2025-10-11 16:12:22,746 | INFO     | sum of deviations: -1521027375.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,746 | INFO     | mean x: 1760195751.5
[2025-10-11 12:13:03] 2025-10-11 16:12:22,746 | INFO     | mean y: 2544485.981818182
[2025-10-11 12:13:03] 2025-10-11 16:12:22,747 | INFO     | -- intersect: 6490045115.35485
[2025-10-11 12:13:03] 2025-10-11 16:12:22,747 | INFO     | intersect: 6490045115.35485
[2025-10-11 12:13:03] 2025-10-11 16:12:22,747 | INFO     | chi2: 0.004477868566417705
[2025-10-11 12:13:03] 2025-10-11 16:12:22,747 | INFO     | current chi2=0.004477868566417705 (change=85.3603850594792 %)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,747 | INFO     | sum of square deviations: 358927660.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | sum of deviations: -1796749266.0000002
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | mean x: 1760195904.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | mean y: 2545261.942857143
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | -- intersect: 8813877045.423147
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | intersect: 8813877045.423147
[2025-10-11 12:13:03] 2025-10-11 16:12:22,748 | INFO     | chi2: 0.003716607998090126
[2025-10-11 12:13:03] 2025-10-11 16:12:22,749 | INFO     | current chi2=0.003716607998090126 (change=17.00051167282445 %)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,749 | INFO     | left removable region: 30
[2025-10-11 12:13:03] 2025-10-11 16:12:22,749 | INFO     | sum of square deviations: 183761585.0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,749 | INFO     | sum of deviations: -1542920274.9999998
[2025-10-11 12:13:03] 2025-10-11 16:12:22,749 | INFO     | mean x: 1760196178.5
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | mean y: 2545358.880952381
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | -- intersect: 14781708108.18554
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | intersect: 14781708108.18554
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | chi2: 0.0029379022522410714
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | -- intersect: 14781708108.18554
[2025-10-11 12:13:03] 2025-10-11 16:12:22,750 | INFO     | current memory leak: -8.40 B/s (using 84 data points, chi2=0.00)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | could have reported an average CPU frequency of 1945 MHz (8 samples)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | ..............................
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | . Timing measurements:
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | . get job = 0 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | . initial setup = 2 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | . payload setup = 8 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,751 | INFO     | . stage-in = 0 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,752 | INFO     | . payload execution = 7316 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,752 | INFO     | . stage-out = 0 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,752 | INFO     | . log creation = 0 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,752 | INFO     | ..............................
[2025-10-11 12:13:03] 2025-10-11 16:12:22,844 | INFO     | 
[2025-10-11 12:13:03] 2025-10-11 16:12:22,845 | INFO     | job summary report
[2025-10-11 12:13:03] 2025-10-11 16:12:22,845 | INFO     | --------------------------------------------------
[2025-10-11 12:13:03] 2025-10-11 16:12:22,845 | INFO     | PanDA job id: 6838231948
[2025-10-11 12:13:03] 2025-10-11 16:12:22,845 | INFO     | task id: 46676269
[2025-10-11 12:13:03] 2025-10-11 16:12:22,845 | INFO     | errors: (none)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | pilot state: finished 
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | transexitcode: 0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | exeerrorcode: 0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | exeerrordiag: 
[2025-10-11 12:13:03] 2025-10-11 16:12:22,846 | INFO     | exitcode: 0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | exitmsg: OK
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | cpuconsumptiontime: 53678 s
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | nevents: 400
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | neventsw: 0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | pid: 32239
[2025-10-11 12:13:03] 2025-10-11 16:12:22,847 | INFO     | pgrp: 32239
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | corecount: 8
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | event service: False
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7329: 2376509, 7330: 2385507, 7333: 2385691, 7340: 2385885}
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | --------------------------------------------------
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | 
[2025-10-11 12:13:03] 2025-10-11 16:12:22,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 12:13:03] 2025-10-11 16:12:22,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:13:03] 2025-10-11 16:12:22,884 | INFO     | job 6838231948 has completed (purged errors)
[2025-10-11 12:13:03] 2025-10-11 16:12:22,884 | INFO     | overall cleanup function is called
[2025-10-11 12:13:03] 2025-10-11 16:12:23,891 | INFO     | --- collectZombieJob: --- 10, [32239]
[2025-10-11 12:13:03] 2025-10-11 16:12:23,891 | INFO     | zombie collector waiting for pid 32239
[2025-10-11 12:13:03] 2025-10-11 16:12:23,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:13:03] 2025-10-11 16:12:23,892 | INFO     | collected zombie processes
[2025-10-11 12:13:03] 2025-10-11 16:12:23,892 | INFO     | will attempt to kill all subprocesses of pid=32239
[2025-10-11 12:13:03] 2025-10-11 16:12:23,987 | INFO     | process IDs to be killed: [32239] (in reverse order)
[2025-10-11 12:13:03] 2025-10-11 16:12:24,045 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:13:03] 2025-10-11 16:12:24,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:13:03] 2025-10-11 16:12:24,049 | INFO     | did not find any defunct processes belonging to 32239
[2025-10-11 12:13:03] 2025-10-11 16:12:24,052 | INFO     | did not find any defunct processes belonging to 32239
[2025-10-11 12:13:03] 2025-10-11 16:12:24,052 | INFO     | ready for new job
[2025-10-11 12:13:03] 2025-10-11 16:12:24,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:13:03] 2025-10-11 16:12:24,054 | INFO     | ***************************************
[2025-10-11 12:13:03] 2025-10-11 16:12:24,054 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:13:03] 2025-10-11 16:12:24,054 | INFO     | ***************************************
[2025-10-11 12:13:03] 2025-10-11 16:12:24,054 | INFO     | 
[2025-10-11 12:13:03] 2025-10-11 16:12:24,055 | INFO     | architecture information:
[2025-10-11 12:13:03] 2025-10-11 16:12:24,055 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:13:03] 2025-10-11 16:12:24,073 | INFO     | cat /etc/os-release:
[2025-10-11 12:13:03] NAME="CentOS Linux"
[2025-10-11 12:13:03] VERSION="7 (Core)"
[2025-10-11 12:13:03] ID="centos"
[2025-10-11 12:13:03] ID_LIKE="rhel fedora"
[2025-10-11 12:13:03] VERSION_ID="7"
[2025-10-11 12:13:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:13:03] ANSI_COLOR="0;31"
[2025-10-11 12:13:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:13:03] HOME_URL="https://www.centos.org/"
[2025-10-11 12:13:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:13:03] 
[2025-10-11 12:13:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:13:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:13:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:13:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:13:03] 
[2025-10-11 12:13:03] 2025-10-11 16:12:24,074 | INFO     | ***************************************
[2025-10-11 12:13:03] 2025-10-11 16:12:24,577 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 12:13:03] 2025-10-11 16:12:24,598 | INFO     | sufficient remaining disk space (18559795200 B)
[2025-10-11 12:13:03] 2025-10-11 16:12:24,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:13:03] 2025-10-11 16:12:24,599 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:13:03] 2025-10-11 16:12:24,599 | INFO     | update_server=False
[2025-10-11 12:13:03] 2025-10-11 16:12:24,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:13:03] 2025-10-11 16:12:24,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:13:03] 2025-10-11 16:12:24,628 | INFO     | all data control threads have been joined
[2025-10-11 12:13:03] 2025-10-11 16:12:24,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:13:03] 2025-10-11 16:12:24,771 | INFO     | aborting loop
[2025-10-11 12:13:03] 2025-10-11 16:12:25,314 | INFO     | all payload control threads have been joined
[2025-10-11 12:13:03] 2025-10-11 16:12:25,424 | INFO     | all job control threads have been joined
[2025-10-11 12:13:03] 2025-10-11 16:12:25,604 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:25,606 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:25,631 | INFO     | [data] control thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:25,654 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:25,777 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:25,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:13:03] 2025-10-11 16:12:25,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:13:03] 2025-10-11 16:12:26,271 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,317 | INFO     | [payload] control thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,326 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,429 | INFO     | [job] control thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,494 | INFO     | [job] validate thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,512 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:26,514 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:27,877 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:29,952 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:35,259 | INFO     | job.realtimelogging is not enabled
[2025-10-11 12:13:03] 2025-10-11 16:12:36,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:13:03] 2025-10-11 16:12:54,775 | INFO     | PID=25777 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 12:13:03] 2025-10-11 16:12:54,776 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:13:03] 2025-10-11 16:12:54,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:13:03] 2025-10-11 16:12:54,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:13:03] 2025-10-11 16:12:57,565 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:13:03] 2025-10-11 16:12:58,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092464355136)>', '<ExcThread(monitor, started 140091716507392)>']
[2025-10-11 12:13:03] 2025-10-11 16:12:58,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:13:03] 2025-10-11 16:12:58,798 | INFO     | [monitor] control thread has ended
[2025-10-11 12:13:03] 2025-10-11 16:13:03,058 | INFO     | all workflow threads have been joined
[2025-10-11 12:13:03] 2025-10-11 16:13:03,059 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:13:03] 2025-10-11 16:13:03,059 | INFO     | traces error code: 0
[2025-10-11 12:13:03] 2025-10-11 16:13:03,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:13:03] 2025-10-11 16:13:03,178 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:13:03] 2025-10-11 16:13:03,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:13:03] 2025-10-11 16:13:03,188 [wrapper] pilotpid: 25777
[2025-10-11 12:13:03] 2025-10-11 16:13:03,193 [wrapper] Pilot exit status: 0
[2025-10-11 12:13:03] 2025-10-11 16:13:03,210 [wrapper] pandaids: 6838231948
[2025-10-11 12:13:03] 2025-10-11 16:13:03,260 [wrapper] cleanup supervisor_pilot 15100 25778
[2025-10-11 12:13:03] 2025-10-11 16:13:03,266 [wrapper] Test setup, not cleaning
[2025-10-11 12:13:03] 2025-10-11 16:13:03,271 [wrapper] apfmon messages muted
[2025-10-11 12:13:03] 2025-10-11 16:13:03,276 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:13:03] 2025-10-11 16:13:03,280 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:13:03]  *** Error codes and diagnostics ***
[2025-10-11 12:13:03]     "exeErrorCode": 0,
[2025-10-11 12:13:03]     "exeErrorDiag": "",
[2025-10-11 12:13:03]     "pilotErrorCode": 0,
[2025-10-11 12:13:03]     "pilotErrorDiag": "",
[2025-10-11 12:13:03]  *** Listing of results directory ***
[2025-10-11 12:13:03] total 408948
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 04:40 pilot3.tar.gz
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 04:52 queuedata.json
[2025-10-11 12:13:03] -rwx------ 1 boincer umatlas     36292 Oct 11 04:52 runpilot2-wrapper.sh
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas       100 Oct 11 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:13:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 10:09 run_atlas
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas       105 Oct 11 10:09 job.xml
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas 219574416 Oct 11 10:09 EVNT.46676267._002189.pool.root.1
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:09 start_atlas.sh
[2025-10-11 12:13:03] drwxrwx--x 2 boincer umatlas      4096 Oct 11 10:09 shared
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 10:09 input.tar.gz
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas         0 Oct 11 10:09 boinc_lockfile
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 10:09 pandaJob.out
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas    975520 Oct 11 10:09 agis_schedconf.cvmfs.json
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas   1560580 Oct 11 10:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:13:03] drwx------ 5 boincer umatlas      4096 Oct 11 10:09 pilot3
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 12:02 init_data.xml
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas 192452004 Oct 11 12:11 HITS.46676269._054579.pool.root.1
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas       529 Oct 11 12:11 boinc_task_state.xml
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas      1050 Oct 11 12:12 memory_monitor_summary.json
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas    378205 Oct 11 12:12 log.46676269._054579.job.log.tgz.1
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas      7850 Oct 11 12:12 heartbeat.json
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas        95 Oct 11 12:12 pilot_heartbeat.json
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 12:12 boinc_mmap_file
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas        27 Oct 11 12:13 wrapper_checkpoint.txt
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas      4818 Oct 11 12:13 pilotlog.txt
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas   1039109 Oct 11 12:13 log.46676269._054579.job.log.1
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas       357 Oct 11 12:13 output.list
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas       620 Oct 11 12:13 runtime_log
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas   1433600 Oct 11 12:13 result.tar.gz
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 12:13 runtime_log.err
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas       659 Oct 11 12:13 m6bLDmDWkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlufNDmhcbTsn.diag
[2025-10-11 12:13:03] -rw-r--r-- 1 boincer umatlas     20854 Oct 11 12:13 stderr.txt
[2025-10-11 12:13:03] HITS file was successfully produced:
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas 192452004 Oct 11 12:11 shared/HITS.pool.root.1
[2025-10-11 12:13:03]  *** Contents of shared directory: ***
[2025-10-11 12:13:03] total 404356
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas 219574416 Oct 11 10:09 ATLAS.root_0
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:09 start_atlas.sh
[2025-10-11 12:13:03] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 10:09 input.tar.gz
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas 192452004 Oct 11 12:11 HITS.pool.root.1
[2025-10-11 12:13:03] -rw------- 1 boincer umatlas   1433600 Oct 11 12:13 result.tar.gz
12:13:05 (22012): run_atlas exited; CPU time 53678.213751
12:13:05 (22012): called boinc_finish(0)

</stderr_txt>
]]>

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