Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:11:59 (564013): wrapper (7.7.26015): starting
07:11:59 (564013): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:11:59] Arguments: --nthreads 8
[2025-10-11 07:11:59] Threads: 8
[2025-10-11 07:11:59] Checking for CVMFS
[2025-10-11 07:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:11:59] 2.11.3.0 4007 30155 216392 151586 2 74 42560568 45568001 13630 130560 0 164081517 99.844 73493930 25775 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 07:11:59] CVMFS is ok
[2025-10-11 07:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:11:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:11:59] Further information can be found at the LHC@home message board.
[2025-10-11 07:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:11:59] Checking for apptainer binary...
[2025-10-11 07:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:11:59] Running /usr/bin/apptainer --version
[2025-10-11 07:11:59] apptainer version 1.4.1-1.el9
[2025-10-11 07:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:12:00] wns0017.triumf.lcg
[2025-10-11 07:12:00] apptainer works
[2025-10-11 07:12:00] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:12:00] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:12:00] Starting ATLAS job with PandaID=6838366240
[2025-10-11 07:12:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:16:21]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | found no stored workdir sizes
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | WARNING  | wrong length of table data, x=[1760191971.0], y=[9774.0] (must be same and length>=4)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . Timing measurements:
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . get job = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . initial setup = 3 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload setup = 9 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-in = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload execution = 29 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-out = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | . log creation = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366240/pilotlog.txt
[2025-10-11 07:16:21] 2025-10-11 14:15:22,072 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 07:16:21] - Log from pilotlog.txt -
[2025-10-11 07:16:21] 2025-10-11 14:15:22,052 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:16:21] 2025-10-11 14:15:22,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:16:21] 2025-10-11 14:15:22,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | found no stored workdir sizes
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | WARNING  | wrong length of table data, x=[1760191971.0], y=[9774.0] (must be same and length>=4)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . Timing measurements:
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . get job = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . initial setup = 3 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload setup = 9 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-in = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload execution = 29 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-out = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | . log creation = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366240/pilotlog.txt
[2025-10-11 07:16:21] 2025-10-11 14:15:22,073 | WARNING  | 
[2025-10-11 07:16:21] [begin log extracts]
[2025-10-11 07:16:21] - Log from pilotlog.txt -
[2025-10-11 07:16:21] 2025-10-11 14:15:22,052 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:16:21] 2025-10-11 14:15:22,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:16:21] 2025-10-11 14:15:22,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | WARNING  | found no stored workdir sizes
[2025-10-11 07:16:21] 2025-10-11 14:15:22,054 | INFO     | will not add max space = 0 B to job metrics
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | WARNING  | wrong length of table data, x=[1760191971.0], y=[9774.0] (must be same and length>=4)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . Timing measurements:
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . get job = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . initial setup = 3 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload setup = 9 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-in = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . payload execution = 29 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,055 | INFO     | . stage-out = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | . log creation = 0 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | ..............................
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 07:16:21] 2025-10-11 14:15:22,056 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838366240/pilotlog.txt
[2025-10-11 07:16:21] [end log extracts]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,073 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,074 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 07:16:21] 2025-10-11 14:15:22,153 | INFO     | 
[2025-10-11 07:16:21] 2025-10-11 14:15:22,153 | INFO     | job summary report
[2025-10-11 07:16:21] 2025-10-11 14:15:22,153 | INFO     | --------------------------------------------------
[2025-10-11 07:16:21] 2025-10-11 14:15:22,153 | INFO     | PanDA job id: 6838366240
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | task id: 46676269
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 07:13:08,107 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | pilot state: failed 
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | transexitcode: 65
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | exeerrorcode: 65
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | exitcode: 65
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | nevents: 0
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | neventsw: 0
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | pid: 574301
[2025-10-11 07:16:21] 2025-10-11 14:15:22,154 | INFO     | pgrp: 574301
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | corecount: 8
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | event service: False
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | sizes: {0: 2348683, 1: 2348882, 8: 2349144, 11: 2349172, 41: 2372417, 42: 2376869, 168: 2377007}
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | --------------------------------------------------
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | 
[2025-10-11 07:16:21] 2025-10-11 14:15:22,155 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 07:16:21] 2025-10-11 14:15:22,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | job 6838366240 has completed (purged errors)
[2025-10-11 07:16:21] 2025-10-11 14:15:22,171 | INFO     | overall cleanup function is called
[2025-10-11 07:16:21] 2025-10-11 14:15:23,177 | INFO     | --- collectZombieJob: --- 10, [574301]
[2025-10-11 07:16:21] 2025-10-11 14:15:23,178 | INFO     | zombie collector waiting for pid 574301
[2025-10-11 07:16:21] 2025-10-11 14:15:23,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:16:21] 2025-10-11 14:15:23,178 | INFO     | collected zombie processes
[2025-10-11 07:16:21] 2025-10-11 14:15:23,178 | INFO     | will attempt to kill all subprocesses of pid=574301
[2025-10-11 07:16:21] 2025-10-11 14:15:23,394 | INFO     | process IDs to be killed: [574301] (in reverse order)
[2025-10-11 07:16:21] 2025-10-11 14:15:23,460 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:16:21] 2025-10-11 14:15:23,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:16:21] 2025-10-11 14:15:23,470 | INFO     | did not find any defunct processes belonging to 574301
[2025-10-11 07:16:21] 2025-10-11 14:15:23,479 | INFO     | did not find any defunct processes belonging to 574301
[2025-10-11 07:16:21] 2025-10-11 14:15:23,480 | INFO     | ready for new job
[2025-10-11 07:16:21] 2025-10-11 14:15:23,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:16:21] 2025-10-11 14:15:23,481 | INFO     | ***************************************
[2025-10-11 07:16:21] 2025-10-11 14:15:23,481 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:16:21] 2025-10-11 14:15:23,481 | INFO     | ***************************************
[2025-10-11 07:16:21] 2025-10-11 14:15:23,482 | INFO     | 
[2025-10-11 07:16:21] 2025-10-11 14:15:23,483 | INFO     | architecture information:
[2025-10-11 07:16:21] 2025-10-11 14:15:23,483 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:16:21] 2025-10-11 14:15:23,507 | INFO     | cat /etc/os-release:
[2025-10-11 07:16:21] NAME="CentOS Linux"
[2025-10-11 07:16:21] VERSION="7 (Core)"
[2025-10-11 07:16:21] ID="centos"
[2025-10-11 07:16:21] ID_LIKE="rhel fedora"
[2025-10-11 07:16:21] VERSION_ID="7"
[2025-10-11 07:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:16:21] ANSI_COLOR="0;31"
[2025-10-11 07:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:16:21] HOME_URL="https://www.centos.org/"
[2025-10-11 07:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:16:21] 
[2025-10-11 07:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:16:21] 
[2025-10-11 07:16:21] 2025-10-11 14:15:23,507 | INFO     | ***************************************
[2025-10-11 07:16:21] 2025-10-11 14:15:24,011 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 07:16:21] 2025-10-11 14:15:24,024 | INFO     | sufficient remaining disk space (1246053269504 B)
[2025-10-11 07:16:21] 2025-10-11 14:15:24,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:16:21] 2025-10-11 14:15:24,024 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:16:21] 2025-10-11 14:15:24,024 | INFO     | update_server=False
[2025-10-11 07:16:21] 2025-10-11 14:15:24,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:16:21] 2025-10-11 14:15:24,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:16:21] 2025-10-11 14:15:24,025 | INFO     | aborting loop
[2025-10-11 07:16:21] 2025-10-11 14:15:24,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:16:21] 2025-10-11 14:15:24,293 | INFO     | all data control threads have been joined
[2025-10-11 07:16:21] 2025-10-11 14:15:24,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:16:21] 2025-10-11 14:15:24,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:16:21] 2025-10-11 14:15:24,990 | INFO     | all job control threads have been joined
[2025-10-11 07:16:21] 2025-10-11 14:15:25,030 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,030 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,031 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,298 | INFO     | [data] control thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,376 | INFO     | all payload control threads have been joined
[2025-10-11 07:16:21] 2025-10-11 14:15:25,508 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,700 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,873 | INFO     | [job] validate thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,989 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:25,996 | INFO     | [job] control thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:26,075 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:26,295 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:26,381 | INFO     | [payload] control thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:26,501 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:26,789 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:28,317 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:16:21] 2025-10-11 14:15:54,190 | INFO     | PID=567684 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:16:21] 2025-10-11 14:15:54,190 | INFO     | .. there are 26 such processes running
[2025-10-11 07:16:21] 2025-10-11 14:15:54,191 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:16:21] 2025-10-11 14:15:54,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:16:21] 2025-10-11 14:15:54,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:16:21] 2025-10-11 14:16:14,943 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:16:21] 2025-10-11 14:16:15,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756388845376)>', '<ExcThread(monitor, started 139755987646208)>']
[2025-10-11 07:16:21] 2025-10-11 14:16:16,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:16:21] 2025-10-11 14:16:16,307 | INFO     | [monitor] control thread has ended
[2025-10-11 07:16:21] 2025-10-11 14:16:20,810 | INFO     | all workflow threads have been joined
[2025-10-11 07:16:21] 2025-10-11 14:16:20,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:16:21] 2025-10-11 14:16:20,811 | INFO     | traces error code: 0
[2025-10-11 07:16:21] 2025-10-11 14:16:20,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:16:21] 2025-10-11 14:16:20,929 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:16:21] 2025-10-11 14:16:20,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:16:21] 2025-10-11 14:16:20,938 [wrapper] pilotpid: 567684
[2025-10-11 07:16:21] 2025-10-11 14:16:20,943 [wrapper] Pilot exit status: 0
[2025-10-11 07:16:21] 2025-10-11 14:16:20,971 [wrapper] pandaids: 6838366240
[2025-10-11 07:16:21] 2025-10-11 14:16:21,052 [wrapper] cleanup supervisor_pilot  567691 567685
[2025-10-11 07:16:21] 2025-10-11 14:16:21,056 [wrapper] Test setup, not cleaning
[2025-10-11 07:16:21] 2025-10-11 14:16:21,060 [wrapper] apfmon messages muted
[2025-10-11 07:16:21] 2025-10-11 14:16:21,064 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:16:21] 2025-10-11 14:16:21,068 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:16:21]  *** Error codes and diagnostics ***
[2025-10-11 07:16:21]     "exeErrorCode": 65,
[2025-10-11 07:16:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 07:16:21]     "pilotErrorCode": 1305,
[2025-10-11 07:16:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 07:16:21]  *** Listing of results directory ***
[2025-10-11 07:16:21] total 222036
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc    557409 Oct 11 04:21 pilot3.tar.gz
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc      5112 Oct 11 04:48 queuedata.json
[2025-10-11 07:16:21] -rwx------. 1 boinc boinc     36292 Oct 11 04:48 runpilot2-wrapper.sh
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc       100 Oct 11 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:16:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 07:11 run_atlas
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc       105 Oct 11 07:11 job.xml
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc 223251673 Oct 11 07:11 EVNT.46676267._002293.pool.root.1
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc      6444 Oct 11 07:11 init_data.xml
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc     15120 Oct 11 07:11 start_atlas.sh
[2025-10-11 07:16:21] drwxrwx--x. 2 boinc boinc      4096 Oct 11 07:11 shared
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc    569684 Oct 11 07:11 input.tar.gz
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc         0 Oct 11 07:11 boinc_lockfile
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc      2550 Oct 11 07:12 pandaJob.out
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc    975520 Oct 11 07:12 agis_schedconf.cvmfs.json
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc   1560580 Oct 11 07:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:16:21] drwx------. 5 boinc boinc      4096 Oct 11 07:12 pilot3
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc       521 Oct 11 07:13 boinc_task_state.xml
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc       952 Oct 11 07:13 memory_monitor_summary.json
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc     21118 Oct 11 07:13 log.46676269._057123.job.log.tgz.1
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc        95 Oct 11 07:15 pilot_heartbeat.json
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc      8388 Oct 11 07:15 heartbeat.json
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc      8192 Oct 11 07:16 boinc_mmap_file
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc        22 Oct 11 07:16 wrapper_checkpoint.txt
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc      4822 Oct 11 07:16 pilotlog.txt
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc     84570 Oct 11 07:16 log.46676269._057123.job.log.1
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc       188 Oct 11 07:16 output.list
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc       620 Oct 11 07:16 runtime_log
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc    122880 Oct 11 07:16 result.tar.gz
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc       647 Oct 11 07:16 WhiNDmxGnR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSoRMDmN1V3qn.diag
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc      8526 Oct 11 07:16 runtime_log.err
[2025-10-11 07:16:21] -rw-r--r--. 1 boinc boinc     21613 Oct 11 07:16 stderr.txt
[2025-10-11 07:16:21] No HITS result produced
[2025-10-11 07:16:21]  *** Contents of shared directory: ***
[2025-10-11 07:16:21] total 218720
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc 223251673 Oct 11 07:11 ATLAS.root_0
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc     15120 Oct 11 07:11 start_atlas.sh
[2025-10-11 07:16:21] -rw-r--r--. 2 boinc boinc    569684 Oct 11 07:11 input.tar.gz
[2025-10-11 07:16:21] -rw-------. 1 boinc boinc    122880 Oct 11 07:16 result.tar.gz
07:16:22 (564013): run_atlas exited; CPU time 25.075373
07:16:22 (564013): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN