Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:02:35 (25808): wrapper (7.7.26015): starting
10:02:35 (25808): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:02:35] Arguments: --nthreads 8
[2025-10-11 10:02:35] Threads: 8
[2025-10-11 10:02:35] Checking for CVMFS
[2025-10-11 10:02:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:02:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:02:35] 2.11.2.0 2924 201510 122080 151585 1 57 14751656 20275201 1 130560 1 73445685 99.975 10488560 11255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:02:35] CVMFS is ok
[2025-10-11 10:02:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:02:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:02:35] Further information can be found at the LHC@home message board.
[2025-10-11 10:02:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:02:35] Checking for apptainer binary...
[2025-10-11 10:02:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:02:35] Running /usr/bin/apptainer --version
[2025-10-11 10:02:35] apptainer version 1.3.2-1.el7
[2025-10-11 10:02:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:02:37] c-204-30.aglt2.org
[2025-10-11 10:02:37] apptainer works
[2025-10-11 10:02:37] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:02:37] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:02:37] Starting ATLAS job with PandaID=6838231941
[2025-10-11 10:02:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:11:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:11:13] 2025-10-11 16:10:06,098 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:11:13] 2025-10-11 16:10:06,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:11:13] 2025-10-11 16:10:06,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:11:13] 2025-10-11 16:10:06,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:11:13] 2025-10-11 16:10:06,102 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:11:13] 2025-10-11 16:10:06,102 | INFO     | sum of square deviations: 605592750.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | sum of deviations: 11604739552.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | mean x: 1760195189.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | mean y: 2450251.928
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | -- intersect: -33727489099.275288
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | intersect: -33727489099.275288
[2025-10-11 12:11:13] 2025-10-11 16:10:06,103 | INFO     | chi2: 2.244655746318747
[2025-10-11 12:11:13] 2025-10-11 16:10:06,104 | INFO     | sum of square deviations: 535786790.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | sum of deviations: 19099465206.999992
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | mean x: 1760195036.5
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | mean y: 2466039.4166666665
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | -- intersect: -62744104956.0456
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | intersect: -62744104956.0456
[2025-10-11 12:11:13] 2025-10-11 16:10:06,105 | INFO     | chi2: 1.4725705351215745
[2025-10-11 12:11:13] 2025-10-11 16:10:06,106 | INFO     | current chi2=1.4725705351215745 (change=34.39659789539658 %)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,106 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,106 | INFO     | sum of deviations: 18163377324.000008
[2025-10-11 12:11:13] 2025-10-11 16:10:06,106 | INFO     | mean x: 1760194884.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | mean y: 2463815.408695652
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | -- intersect: -67795750350.39717
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | intersect: -67795750350.39717
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | chi2: 1.4744930394229037
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | current chi2=1.4744930394229037 (change=-0.13055430999577886 %)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,107 | INFO     | right removable region: 114
[2025-10-11 12:11:13] 2025-10-11 16:10:06,108 | INFO     | sum of square deviations: 535786790.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,108 | INFO     | sum of deviations: -7215650167.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,108 | INFO     | mean x: 1760195341.5
[2025-10-11 12:11:13] 2025-10-11 16:10:06,108 | INFO     | mean y: 2490646.45
[2025-10-11 12:11:13] 2025-10-11 16:10:06,108 | INFO     | -- intersect: 23707729459.536633
[2025-10-11 12:11:13] 2025-10-11 16:10:06,109 | INFO     | intersect: 23707729459.536633
[2025-10-11 12:11:13] 2025-10-11 16:10:06,109 | INFO     | chi2: 0.8327936544772164
[2025-10-11 12:11:13] 2025-10-11 16:10:06,109 | INFO     | current chi2=0.8327936544772164 (change=62.89882509409273 %)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,109 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,110 | INFO     | sum of deviations: -7241095646.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,110 | INFO     | mean x: 1760195494.0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,110 | INFO     | mean y: 2490566.156521739
[2025-10-11 12:11:13] 2025-10-11 16:10:06,110 | INFO     | -- intersect: 27031248201.89095
[2025-10-11 12:11:13] 2025-10-11 16:10:06,110 | INFO     | intersect: 27031248201.89095
[2025-10-11 12:11:13] 2025-10-11 16:10:06,111 | INFO     | chi2: 0.8154253435590618
[2025-10-11 12:11:13] 2025-10-11 16:10:06,111 | INFO     | current chi2=0.8154253435590618 (change=2.085547941531508 %)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,111 | INFO     | left removable region: 20
[2025-10-11 12:11:13] 2025-10-11 16:10:06,111 | INFO     | sum of square deviations: 257521107.5
[2025-10-11 12:11:13] 2025-10-11 16:10:06,111 | INFO     | sum of deviations: 1059200736.5
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | mean x: 1760195463.5
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | mean y: 2506737.989361702
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | -- intersect: -7237289445.79786
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | intersect: -7237289445.79786
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | chi2: 0.00042210556237030455
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | -- intersect: -7237289445.79786
[2025-10-11 12:11:13] 2025-10-11 16:10:06,112 | INFO     | current memory leak: 4.11 B/s (using 94 data points, chi2=0.00)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | could have reported an average CPU frequency of 2008 MHz (8 samples)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | ..............................
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | . Timing measurements:
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | . get job = 0 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | . initial setup = 2 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,113 | INFO     | . payload setup = 8 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,114 | INFO     | . stage-in = 0 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,114 | INFO     | . payload execution = 7591 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,114 | INFO     | . stage-out = 0 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,114 | INFO     | . log creation = 0 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,114 | INFO     | ..............................
[2025-10-11 12:11:13] 2025-10-11 16:10:06,208 | INFO     | 
[2025-10-11 12:11:13] 2025-10-11 16:10:06,209 | INFO     | job summary report
[2025-10-11 12:11:13] 2025-10-11 16:10:06,209 | INFO     | --------------------------------------------------
[2025-10-11 12:11:13] 2025-10-11 16:10:06,209 | INFO     | PanDA job id: 6838231941
[2025-10-11 12:11:13] 2025-10-11 16:10:06,209 | INFO     | task id: 46676269
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | errors: (none)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | pilot state: finished 
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | transexitcode: 0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | exeerrorcode: 0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,210 | INFO     | exeerrordiag: 
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | exitcode: 0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | exitmsg: OK
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | cpuconsumptiontime: 56243 s
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | nevents: 400
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | neventsw: 0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,211 | INFO     | pid: 3625
[2025-10-11 12:11:13] 2025-10-11 16:10:06,212 | INFO     | pgrp: 3625
[2025-10-11 12:11:13] 2025-10-11 16:10:06,212 | INFO     | corecount: 8
[2025-10-11 12:11:13] 2025-10-11 16:10:06,212 | INFO     | event service: False
[2025-10-11 12:11:13] 2025-10-11 16:10:06,212 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7603: 2376692, 7605: 2385690, 7607: 2385774, 7613: 2386096}
[2025-10-11 12:11:13] 2025-10-11 16:10:06,212 | INFO     | --------------------------------------------------
[2025-10-11 12:11:13] 2025-10-11 16:10:06,213 | INFO     | 
[2025-10-11 12:11:13] 2025-10-11 16:10:06,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 12:11:13] 2025-10-11 16:10:06,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,245 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,245 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,245 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:11:13] 2025-10-11 16:10:06,245 | INFO     | job 6838231941 has completed (purged errors)
[2025-10-11 12:11:13] 2025-10-11 16:10:06,246 | INFO     | overall cleanup function is called
[2025-10-11 12:11:13] 2025-10-11 16:10:07,254 | INFO     | --- collectZombieJob: --- 10, [3625]
[2025-10-11 12:11:13] 2025-10-11 16:10:07,254 | INFO     | zombie collector waiting for pid 3625
[2025-10-11 12:11:13] 2025-10-11 16:10:07,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:11:13] 2025-10-11 16:10:07,254 | INFO     | collected zombie processes
[2025-10-11 12:11:13] 2025-10-11 16:10:07,255 | INFO     | will attempt to kill all subprocesses of pid=3625
[2025-10-11 12:11:13] 2025-10-11 16:10:07,347 | INFO     | process IDs to be killed: [3625] (in reverse order)
[2025-10-11 12:11:13] 2025-10-11 16:10:07,409 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:11:13] 2025-10-11 16:10:07,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:11:13] 2025-10-11 16:10:07,414 | INFO     | did not find any defunct processes belonging to 3625
[2025-10-11 12:11:13] 2025-10-11 16:10:07,417 | INFO     | did not find any defunct processes belonging to 3625
[2025-10-11 12:11:13] 2025-10-11 16:10:07,418 | INFO     | ready for new job
[2025-10-11 12:11:13] 2025-10-11 16:10:07,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:11:13] 2025-10-11 16:10:07,419 | INFO     | ***************************************
[2025-10-11 12:11:13] 2025-10-11 16:10:07,420 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:11:13] 2025-10-11 16:10:07,420 | INFO     | ***************************************
[2025-10-11 12:11:13] 2025-10-11 16:10:07,420 | INFO     | 
[2025-10-11 12:11:13] 2025-10-11 16:10:07,420 | INFO     | architecture information:
[2025-10-11 12:11:13] 2025-10-11 16:10:07,421 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:11:13] 2025-10-11 16:10:07,439 | INFO     | cat /etc/os-release:
[2025-10-11 12:11:13] NAME="CentOS Linux"
[2025-10-11 12:11:13] VERSION="7 (Core)"
[2025-10-11 12:11:13] ID="centos"
[2025-10-11 12:11:13] ID_LIKE="rhel fedora"
[2025-10-11 12:11:13] VERSION_ID="7"
[2025-10-11 12:11:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:11:13] ANSI_COLOR="0;31"
[2025-10-11 12:11:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:11:13] HOME_URL="https://www.centos.org/"
[2025-10-11 12:11:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:11:13] 
[2025-10-11 12:11:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:11:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:11:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:11:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:11:13] 
[2025-10-11 12:11:13] 2025-10-11 16:10:07,439 | INFO     | ***************************************
[2025-10-11 12:11:13] 2025-10-11 16:10:07,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 12:11:13] 2025-10-11 16:10:07,976 | INFO     | sufficient remaining disk space (18549309440 B)
[2025-10-11 12:11:13] 2025-10-11 16:10:07,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:11:13] 2025-10-11 16:10:07,977 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:11:13] 2025-10-11 16:10:07,977 | INFO     | update_server=False
[2025-10-11 12:11:13] 2025-10-11 16:10:07,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:11:13] 2025-10-11 16:10:07,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:11:13] 2025-10-11 16:10:07,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:11:13] 2025-10-11 16:10:07,978 | INFO     | aborting loop
[2025-10-11 12:11:13] 2025-10-11 16:10:08,193 | INFO     | all payload control threads have been joined
[2025-10-11 12:11:13] 2025-10-11 16:10:08,485 | INFO     | all data control threads have been joined
[2025-10-11 12:11:13] 2025-10-11 16:10:08,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:11:13] 2025-10-11 16:10:08,980 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:08,981 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:08,983 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:09,090 | INFO     | all job control threads have been joined
[2025-10-11 12:11:13] 2025-10-11 16:10:09,198 | INFO     | [payload] control thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:09,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:09,452 | INFO     | [job] validate thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:09,490 | INFO     | [data] control thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:09,780 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,024 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,037 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,096 | INFO     | [job] control thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,310 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,372 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,540 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,777 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:10,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:11:13] 2025-10-11 16:10:14,837 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:11:13] 2025-10-11 16:10:38,462 | INFO     | PID=29569 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 12:11:13] 2025-10-11 16:10:38,462 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:11:13] 2025-10-11 16:10:38,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:11:13] 2025-10-11 16:10:38,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:11:13] 2025-10-11 16:11:07,329 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:11:13] 2025-10-11 16:11:08,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705145542464)>', '<ExcThread(monitor, started 139704322213632)>']
[2025-10-11 12:11:13] 2025-10-11 16:11:08,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:11:13] 2025-10-11 16:11:08,609 | INFO     | [monitor] control thread has ended
[2025-10-11 12:11:13] 2025-10-11 16:11:13,336 | INFO     | all workflow threads have been joined
[2025-10-11 12:11:13] 2025-10-11 16:11:13,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:11:13] 2025-10-11 16:11:13,337 | INFO     | traces error code: 0
[2025-10-11 12:11:13] 2025-10-11 16:11:13,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:11:13] 2025-10-11 16:11:13,446 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:11:13] 2025-10-11 16:11:13,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:11:13] 2025-10-11 16:11:13,455 [wrapper] pilotpid: 29569
[2025-10-11 12:11:13] 2025-10-11 16:11:13,459 [wrapper] Pilot exit status: 0
[2025-10-11 12:11:13] 2025-10-11 16:11:13,478 [wrapper] pandaids: 6838231941
[2025-10-11 12:11:13] 2025-10-11 16:11:13,531 [wrapper] cleanup supervisor_pilot 17068 29570
[2025-10-11 12:11:13] 2025-10-11 16:11:13,536 [wrapper] Test setup, not cleaning
[2025-10-11 12:11:13] 2025-10-11 16:11:13,541 [wrapper] apfmon messages muted
[2025-10-11 12:11:13] 2025-10-11 16:11:13,546 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:11:13] 2025-10-11 16:11:13,550 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:11:13]  *** Error codes and diagnostics ***
[2025-10-11 12:11:13]     "exeErrorCode": 0,
[2025-10-11 12:11:13]     "exeErrorDiag": "",
[2025-10-11 12:11:13]     "pilotErrorCode": 0,
[2025-10-11 12:11:13]     "pilotErrorDiag": "",
[2025-10-11 12:11:13]  *** Listing of results directory ***
[2025-10-11 12:11:13] total 414764
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 04:40 pilot3.tar.gz
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 04:52 queuedata.json
[2025-10-11 12:11:13] -rwx------ 1 boincer umatlas     36292 Oct 11 04:52 runpilot2-wrapper.sh
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas       100 Oct 11 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:11:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 10:02 run_atlas
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas       105 Oct 11 10:02 job.xml
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas 219574416 Oct 11 10:02 EVNT.46676267._002189.pool.root.1
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 12:11:13] drwxrwx--x 2 boincer umatlas      4096 Oct 11 10:02 shared
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 10:02 input.tar.gz
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas         0 Oct 11 10:02 boinc_lockfile
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 10:02 pandaJob.out
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas    975520 Oct 11 10:02 agis_schedconf.cvmfs.json
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas   1560580 Oct 11 10:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:11:13] drwx------ 5 boincer umatlas      4096 Oct 11 10:02 pilot3
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 12:00 init_data.xml
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas 198340174 Oct 11 12:09 HITS.46676269._054572.pool.root.1
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas       529 Oct 11 12:09 boinc_task_state.xml
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas        95 Oct 11 12:09 pilot_heartbeat.json
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas      1051 Oct 11 12:09 memory_monitor_summary.json
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas    375849 Oct 11 12:09 log.46676269._054572.job.log.tgz.1
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas      7847 Oct 11 12:10 heartbeat.json
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 12:11 boinc_mmap_file
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas        27 Oct 11 12:11 wrapper_checkpoint.txt
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas      4746 Oct 11 12:11 pilotlog.txt
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas   1074222 Oct 11 12:11 log.46676269._054572.job.log.1
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas       357 Oct 11 12:11 output.list
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas       620 Oct 11 12:11 runtime_log
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas   1474560 Oct 11 12:11 result.tar.gz
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas       659 Oct 11 12:11 upALDmDWkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeufNDmaeFwWo.diag
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 12:11 runtime_log.err
[2025-10-11 12:11:13] -rw-r--r-- 1 boincer umatlas     20826 Oct 11 12:11 stderr.txt
[2025-10-11 12:11:13] HITS file was successfully produced:
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas 198340174 Oct 11 12:09 shared/HITS.pool.root.1
[2025-10-11 12:11:13]  *** Contents of shared directory: ***
[2025-10-11 12:11:13] total 410140
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas 219574416 Oct 11 10:02 ATLAS.root_0
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 12:11:13] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 10:02 input.tar.gz
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas 198340174 Oct 11 12:09 HITS.pool.root.1
[2025-10-11 12:11:13] -rw------- 1 boincer umatlas   1474560 Oct 11 12:11 result.tar.gz
12:11:15 (25808): run_atlas exited; CPU time 56180.234536
12:11:15 (25808): called boinc_finish(0)

</stderr_txt>
]]>

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