Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:02:25 (3602627): wrapper (7.7.26015): starting
10:02:25 (3602627): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:02:25] Arguments: --nthreads 8
[2025-10-11 10:02:25] Threads: 8
[2025-10-11 10:02:25] Checking for CVMFS
[2025-10-11 10:02:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:02:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:02:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:02:27] 2.13.2.0 5035 111472 401976 151585 0 454 20918884 40960001 14064 16776704 1 188140515 99.669 165712635 37392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:02:27] CVMFS is ok
[2025-10-11 10:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:02:27] Further information can be found at the LHC@home message board.
[2025-10-11 10:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:02:27] Checking for apptainer binary...
[2025-10-11 10:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:02:27] Running /usr/bin/apptainer --version
[2025-10-11 10:02:27] apptainer version 1.4.3-1.el9
[2025-10-11 10:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:02:27] c-206-41.aglt2.org
[2025-10-11 10:02:27] apptainer works
[2025-10-11 10:02:27] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:02:27] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:02:27] Starting ATLAS job with PandaID=6838230908
[2025-10-11 10:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:55:34]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:55:34] 2025-10-11 15:54:24,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:55:34] 2025-10-11 15:54:24,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:55:34] 2025-10-11 15:54:24,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:55:34] 2025-10-11 15:54:24,543 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:55:34] 2025-10-11 15:54:24,543 | INFO     | sum of square deviations: 401524944.2568802
[2025-10-11 11:55:34] 2025-10-11 15:54:24,543 | INFO     | sum of deviations: -2838417925.0366993
[2025-10-11 11:55:34] 2025-10-11 15:54:24,544 | INFO     | mean x: 1760194742.082569
[2025-10-11 11:55:34] 2025-10-11 15:54:24,544 | INFO     | mean y: 2407101.5596330273
[2025-10-11 11:55:34] 2025-10-11 15:54:24,544 | INFO     | -- intersect: 12445390729.212307
[2025-10-11 11:55:34] 2025-10-11 15:54:24,544 | INFO     | intersect: 12445390729.212307
[2025-10-11 11:55:34] 2025-10-11 15:54:24,544 | INFO     | chi2: 4.553724878545791
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | sum of square deviations: 348763909.2211526
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | sum of deviations: 18313790634.346153
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | mean x: 1760194589.5865386
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | mean y: 2467095.9615384615
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | -- intersect: -92426348894.15816
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | intersect: -92426348894.15816
[2025-10-11 11:55:34] 2025-10-11 15:54:24,642 | INFO     | chi2: 2.0593312045886503
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | current chi2=2.0593312045886503 (change=54.77699554729606 %)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | sum of square deviations: 300833951.3535353
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | sum of deviations: 17412508535.797985
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | mean x: 1760194437.0808082
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | mean y: 2464225.525252525
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | -- intersect: -101878990718.08586
[2025-10-11 11:55:34] 2025-10-11 15:54:24,643 | INFO     | intersect: -101878990718.08586
[2025-10-11 11:55:34] 2025-10-11 15:54:24,644 | INFO     | chi2: 2.065158171817781
[2025-10-11 11:55:34] 2025-10-11 15:54:24,644 | INFO     | current chi2=2.065158171817781 (change=-0.28295435023502347 %)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,644 | INFO     | right removable region: 98
[2025-10-11 11:55:34] 2025-10-11 15:54:24,644 | INFO     | sum of square deviations: 348758419.2211526
[2025-10-11 11:55:34] 2025-10-11 15:54:24,644 | INFO     | sum of deviations: -22660002825.519234
[2025-10-11 11:55:34] 2025-10-11 15:54:24,676 | INFO     | mean x: 1760194894.5865386
[2025-10-11 11:55:34] 2025-10-11 15:54:24,676 | INFO     | mean y: 2463369.0576923075
[2025-10-11 11:55:34] 2025-10-11 15:54:24,676 | INFO     | -- intersect: 114368222262.76117
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | intersect: 114368222262.76117
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | chi2: 2.695003249463229
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | current chi2=2.695003249463229 (change=40.81760929035605 %)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | sum of square deviations: 300829194.18181854
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | sum of deviations: -19227079738.818184
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | mean x: 1760195047.090909
[2025-10-11 11:55:34] 2025-10-11 15:54:24,677 | INFO     | mean y: 2452269.4242424243
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | -- intersect: 112502871712.87451
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | intersect: 112502871712.87451
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | chi2: 2.678289180989233
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | current chi2=2.678289180989233 (change=0.6201873217527709 %)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | left removable region: 20
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | sum of square deviations: 147113126.87179473
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | sum of deviations: 569187683.3076924
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | mean x: 1760195016.5897436
[2025-10-11 11:55:34] 2025-10-11 15:54:24,678 | INFO     | mean y: 2521600.8846153845
[2025-10-11 11:55:34] 2025-10-11 15:54:24,679 | INFO     | -- intersect: -6807756618.105149
[2025-10-11 11:55:34] 2025-10-11 15:54:24,679 | INFO     | intersect: -6807756618.105149
[2025-10-11 11:55:34] 2025-10-11 15:54:24,679 | INFO     | chi2: 0.00014810118815801614
[2025-10-11 11:55:34] 2025-10-11 15:54:24,679 | INFO     | -- intersect: -6807756618.105149
[2025-10-11 11:55:34] 2025-10-11 15:54:24,679 | INFO     | current memory leak: 3.87 B/s (using 78 data points, chi2=0.00)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,680 | INFO     | could have reported an average CPU frequency of 3192 MHz (7 samples)
[2025-10-11 11:55:34] 2025-10-11 15:54:24,680 | INFO     | ..............................
[2025-10-11 11:55:34] 2025-10-11 15:54:24,680 | INFO     | . Timing measurements:
[2025-10-11 11:55:34] 2025-10-11 15:54:24,680 | INFO     | . get job = 0 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,716 | INFO     | . initial setup = 3 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,716 | INFO     | . payload setup = 18 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,716 | INFO     | . stage-in = 0 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,717 | INFO     | . payload execution = 6597 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,717 | INFO     | . stage-out = 3 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,717 | INFO     | . log creation = 0 s
[2025-10-11 11:55:34] 2025-10-11 15:54:24,717 | INFO     | ..............................
[2025-10-11 11:55:34] 2025-10-11 15:54:25,399 | INFO     | 
[2025-10-11 11:55:34] 2025-10-11 15:54:25,400 | INFO     | job summary report
[2025-10-11 11:55:34] 2025-10-11 15:54:25,400 | INFO     | --------------------------------------------------
[2025-10-11 11:55:34] 2025-10-11 15:54:25,400 | INFO     | PanDA job id: 6838230908
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | task id: 46676269
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | errors: (none)
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | pilot state: finished 
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | transexitcode: 0
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | exeerrorcode: 0
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | exeerrordiag: 
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | exitcode: 0
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | exitmsg: OK
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | cpuconsumptiontime: 34041 s
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | nevents: 400
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | neventsw: 0
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | pid: 3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | pgrp: 3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | corecount: 8
[2025-10-11 11:55:34] 2025-10-11 15:54:25,401 | INFO     | event service: False
[2025-10-11 11:55:34] 2025-10-11 15:54:25,402 | INFO     | sizes: {0: 2347978, 1: 2348579, 2: 2348691, 3: 2348890, 11: 2349152, 14: 2349180, 6620: 2376448, 6621: 2376447, 6626: 2385557, 6643: 2385723}
[2025-10-11 11:55:34] 2025-10-11 15:54:25,402 | INFO     | --------------------------------------------------
[2025-10-11 11:55:34] 2025-10-11 15:54:25,402 | INFO     | 
[2025-10-11 11:55:34] 2025-10-11 15:54:25,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 11:55:34] 2025-10-11 15:54:25,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | job 6838230908 has completed (purged errors)
[2025-10-11 11:55:34] 2025-10-11 15:54:25,673 | INFO     | overall cleanup function is called
[2025-10-11 11:55:34] 2025-10-11 15:54:26,717 | INFO     | --- collectZombieJob: --- 10, [3613006]
[2025-10-11 11:55:34] 2025-10-11 15:54:26,717 | INFO     | zombie collector waiting for pid 3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:26,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:55:34] 2025-10-11 15:54:26,718 | INFO     | collected zombie processes
[2025-10-11 11:55:34] 2025-10-11 15:54:26,718 | INFO     | will attempt to kill all subprocesses of pid=3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:28,222 | INFO     | process IDs to be killed: [3613006] (in reverse order)
[2025-10-11 11:55:34] 2025-10-11 15:54:28,641 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:55:34] 2025-10-11 15:54:28,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:55:34] 2025-10-11 15:54:28,668 | INFO     | did not find any defunct processes belonging to 3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:28,690 | INFO     | did not find any defunct processes belonging to 3613006
[2025-10-11 11:55:34] 2025-10-11 15:54:28,691 | INFO     | ready for new job
[2025-10-11 11:55:34] 2025-10-11 15:54:28,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:55:34] 2025-10-11 15:54:28,697 | INFO     | ***************************************
[2025-10-11 11:55:34] 2025-10-11 15:54:28,697 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:55:34] 2025-10-11 15:54:28,697 | INFO     | ***************************************
[2025-10-11 11:55:34] 2025-10-11 15:54:28,697 | INFO     | 
[2025-10-11 11:55:34] 2025-10-11 15:54:28,709 | INFO     | architecture information:
[2025-10-11 11:55:34] 2025-10-11 15:54:28,709 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:55:34] 2025-10-11 15:54:28,766 | INFO     | cat /etc/os-release:
[2025-10-11 11:55:34] NAME="CentOS Linux"
[2025-10-11 11:55:34] VERSION="7 (Core)"
[2025-10-11 11:55:34] ID="centos"
[2025-10-11 11:55:34] ID_LIKE="rhel fedora"
[2025-10-11 11:55:34] VERSION_ID="7"
[2025-10-11 11:55:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:55:34] ANSI_COLOR="0;31"
[2025-10-11 11:55:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:55:34] HOME_URL="https://www.centos.org/"
[2025-10-11 11:55:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:55:34] 
[2025-10-11 11:55:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:55:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:55:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:55:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:55:34] 
[2025-10-11 11:55:34] 2025-10-11 15:54:28,767 | INFO     | ***************************************
[2025-10-11 11:55:34] 2025-10-11 15:54:29,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 11:55:34] 2025-10-11 15:54:29,326 | INFO     | sufficient remaining disk space (84033929216 B)
[2025-10-11 11:55:34] 2025-10-11 15:54:29,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | INFO     | update_server=False
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | INFO     | aborting loop
[2025-10-11 11:55:34] 2025-10-11 15:54:29,327 | INFO     | all payload control threads have been joined
[2025-10-11 11:55:34] 2025-10-11 15:54:29,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:55:34] 2025-10-11 15:54:29,565 | INFO     | all data control threads have been joined
[2025-10-11 11:55:34] 2025-10-11 15:54:29,921 | INFO     | all job control threads have been joined
[2025-10-11 11:55:35] 2025-10-11 15:54:30,332 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,337 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,344 | INFO     | [payload] control thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,352 | INFO     | [job] validate thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,364 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:55:35] 2025-10-11 15:54:30,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,534 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,571 | INFO     | [data] control thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,901 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:30,928 | INFO     | [job] control thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:31,026 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:31,145 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:31,362 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:31,426 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:31,546 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:32,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:55:35] 2025-10-11 15:54:36,443 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:55:35] 2025-10-11 15:54:59,639 | INFO     | PID=3606597 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:55:35] 2025-10-11 15:54:59,639 | INFO     | .. there are 12 such processes running
[2025-10-11 11:55:35] 2025-10-11 15:54:59,639 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:55:35] 2025-10-11 15:54:59,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:55:35] 2025-10-11 15:54:59,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:55:35] 2025-10-11 15:55:28,277 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:55:35] 2025-10-11 15:55:29,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958058764096)>', '<ExcThread(monitor, started 139957339416320)>']
[2025-10-11 11:55:35] 2025-10-11 15:55:29,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:55:35] 2025-10-11 15:55:29,989 | INFO     | [monitor] control thread has ended
[2025-10-11 11:55:35] 2025-10-11 15:55:34,146 | INFO     | all workflow threads have been joined
[2025-10-11 11:55:35] 2025-10-11 15:55:34,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:55:35] 2025-10-11 15:55:34,147 | INFO     | traces error code: 0
[2025-10-11 11:55:35] 2025-10-11 15:55:34,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:55:35] 2025-10-11 15:55:34,385 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:55:35] 2025-10-11 15:55:34,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:55:35] 2025-10-11 15:55:34,437 [wrapper] pilotpid: 3606597
[2025-10-11 11:55:35] 2025-10-11 15:55:34,440 [wrapper] Pilot exit status: 0
[2025-10-11 11:55:35] 2025-10-11 15:55:34,537 [wrapper] pandaids: 6838230908
[2025-10-11 11:55:35] 2025-10-11 15:55:34,603 [wrapper] cleanup supervisor_pilot 3860878 3606598
[2025-10-11 11:55:35] 2025-10-11 15:55:34,607 [wrapper] Test setup, not cleaning
[2025-10-11 11:55:35] 2025-10-11 15:55:34,631 [wrapper] apfmon messages muted
[2025-10-11 11:55:35] 2025-10-11 15:55:34,752 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:55:35] 2025-10-11 15:55:34,761 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:55:35]  *** Error codes and diagnostics ***
[2025-10-11 11:55:35]     "exeErrorCode": 0,
[2025-10-11 11:55:35]     "exeErrorDiag": "",
[2025-10-11 11:55:35]     "pilotErrorCode": 0,
[2025-10-11 11:55:35]     "pilotErrorDiag": "",
[2025-10-11 11:55:35]  *** Listing of results directory ***
[2025-10-11 11:55:35] total 406632
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 04:40 pilot3.tar.gz
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 04:45 queuedata.json
[2025-10-11 11:55:35] -rwx------. 1 boincer umatlas     36292 Oct 11 04:47 runpilot2-wrapper.sh
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:55:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:02 run_atlas
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:02 job.xml
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas 219015552 Oct 11 10:02 EVNT.46676267._002186.pool.root.1
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 11:55:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:02 shared
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 10:02 input.tar.gz
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:02 boinc_lockfile
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 10:02 pandaJob.out
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas    975520 Oct 11 10:03 agis_schedconf.cvmfs.json
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:55:35] drwx------. 5 boincer umatlas      4096 Oct 11 10:03 pilot3
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas      6898 Oct 11 11:46 init_data.xml
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas 190941800 Oct 11 11:51 HITS.46676269._054485.pool.root.1
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas       529 Oct 11 11:51 boinc_task_state.xml
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas      1036 Oct 11 11:53 memory_monitor_summary.json
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas    345014 Oct 11 11:54 log.46676269._054485.job.log.tgz.1
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas        95 Oct 11 11:54 pilot_heartbeat.json
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas      7777 Oct 11 11:54 heartbeat.json
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:55 boinc_mmap_file
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas        27 Oct 11 11:55 wrapper_checkpoint.txt
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas      4824 Oct 11 11:55 pilotlog.txt
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas    920274 Oct 11 11:55 log.46676269._054485.job.log.1
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas       357 Oct 11 11:55 output.list
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:55 runtime_log
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas   1280000 Oct 11 11:55 result.tar.gz
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas       652 Oct 11 11:55 mUGODm9QkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmatfNDmzbYy0m.diag
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 11:55 runtime_log.err
[2025-10-11 11:55:35] -rw-r--r--. 1 boincer umatlas     21010 Oct 11 11:55 stderr.txt
[2025-10-11 11:55:35] HITS file was successfully produced:
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas 190941800 Oct 11 11:51 shared/HITS.pool.root.1
[2025-10-11 11:55:35]  *** Contents of shared directory: ***
[2025-10-11 11:55:35] total 402188
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas 219015552 Oct 11 10:02 ATLAS.root_0
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:02 start_atlas.sh
[2025-10-11 11:55:35] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 10:02 input.tar.gz
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas 190941800 Oct 11 11:51 HITS.pool.root.1
[2025-10-11 11:55:35] -rw-------. 1 boincer umatlas   1280000 Oct 11 11:55 result.tar.gz
11:55:37 (3602627): run_atlas exited; CPU time 34054.393444
11:55:37 (3602627): called boinc_finish(0)

</stderr_txt>
]]>

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