Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:24 (436757): wrapper (7.7.26015): starting
03:40:24 (436757): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 03:40:24] Arguments: --nthreads 2
[2025-10-12 03:40:24] Threads: 2
[2025-10-12 03:40:24] Checking for CVMFS
[2025-10-12 03:40:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:40:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:40:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:40:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:40:24] 2.9.2.0 3809310 3621 60552 151602 3 57 26673064 36864001 0 130560 0 2138374 99.988 121057 1137 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 03:40:24] CVMFS is ok
[2025-10-12 03:40:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:40:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:40:24] Further information can be found at the LHC@home message board.
[2025-10-12 03:40:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:40:24] Checking for apptainer binary...
[2025-10-12 03:40:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:40:24] Running /usr/bin/apptainer --version
[2025-10-12 03:40:24] apptainer version 1.4.1-1.1
[2025-10-12 03:40:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:40:24] thA366
[2025-10-12 03:40:24] apptainer works
[2025-10-12 03:40:24] Set ATHENA_PROC_NUMBER=2
[2025-10-12 03:40:24] Set ATHENA_CORE_NUMBER=2
[2025-10-12 03:40:24] Starting ATLAS job with PandaID=6838366053
[2025-10-12 03:40:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:53:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:53:01] 2025-10-12 03:52:26,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 05:53:01] 2025-10-12 03:52:26,604 | INFO     | monitor loop #607: job 0:6838366053 is in state 'finished'
[2025-10-12 05:53:01] 2025-10-12 03:52:26,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,095 | INFO     | time since job start (7918s) is within the limit (172800.0s)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,564 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:53:01] 2025-10-12 03:52:28,564 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4523.6142500000005
[2025-10-12 05:53:01] 2025-10-12 03:52:28,565 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838366053/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,565 | INFO     | extracted standard info from prmon json
[2025-10-12 05:53:01] 2025-10-12 03:52:28,565 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:53:01] 2025-10-12 03:52:28,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:53:01] 2025-10-12 03:52:28,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:53:01] 2025-10-12 03:52:28,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:53:01] 2025-10-12 03:52:28,566 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:53:01] 2025-10-12 03:52:28,566 | INFO     | sum of square deviations: 681212772.5
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | sum of deviations: -416365534.4999996
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | mean x: 1760237183.5
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | mean y: 2312379.0692307693
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | -- intersect: 1078190761.4798474
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | intersect: 1078190761.4798474
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | chi2: 1.5419232090323234
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | sum of deviations: -451124768.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | mean x: 1760237031.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | mean y: 2312308.944
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | -- intersect: 1313567310.3205585
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | intersect: 1313567310.3205585
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | chi2: 1.5414766450667534
[2025-10-12 05:53:01] 2025-10-12 03:52:28,567 | INFO     | current chi2=1.5414766450667534 (change=0.028961491918279236 %)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | right removable region: 124
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | sum of deviations: -15210561548.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | mean x: 1760237336.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | mean y: 2341464.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | -- intersect: 44213898386.23125
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | intersect: 44213898386.23125
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | chi2: 0.14365167515883323
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | current chi2=0.14365167515883323 (change=90.68360380612042 %)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | sum of deviations: -11029963300.500004
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | mean x: 1760237488.5
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | mean y: 2332312.4916666667
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | -- intersect: 36239423746.4169
[2025-10-12 05:53:01] 2025-10-12 03:52:28,568 | INFO     | intersect: 36239423746.4169
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | chi2: 0.12789492132675134
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | current chi2=0.12789492132675134 (change=10.968722651274279 %)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | left removable region: 20
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | sum of deviations: -1860255298.4999998
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | mean x: 1760237610.5
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | mean y: 2309008.778846154
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | -- intersect: 9391011110.398859
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | intersect: 9391011110.398859
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | chi2: 0.044881208503689034
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | -- intersect: 9391011110.398859
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | current memory leak: -5.33 B/s (using 104 data points, chi2=0.04)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | could have reported an average CPU frequency of 4499 MHz (8 samples)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | ..............................
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . Timing measurements:
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . get job = 0 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . initial setup = 1 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . payload setup = 2 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . stage-in = 0 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,569 | INFO     | . payload execution = 7891 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,570 | INFO     | . stage-out = 0 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,570 | INFO     | . log creation = 0 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,570 | INFO     | ..............................
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | 
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | job summary report
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | --------------------------------------------------
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | PanDA job id: 6838366053
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | task id: 46676269
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | errors: (none)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | pilot state: finished 
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | transexitcode: 0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | exeerrorcode: 0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | exeerrordiag: 
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | exitcode: 0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | exitmsg: OK
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | cpuconsumptiontime: 15295 s
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | nevents: 400
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | neventsw: 0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | pid: 446868
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | pgrp: 446868
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | corecount: 2
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | event service: False
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | sizes: {0: 2348860, 2: 2349122, 10: 2349150, 7897: 2376971, 7898: 2385975, 7900: 2386031, 7905: 2386353}
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | --------------------------------------------------
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | 
[2025-10-12 05:53:01] 2025-10-12 03:52:28,599 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 05:53:01] 2025-10-12 03:52:28,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,609 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | job 6838366053 has completed (purged errors)
[2025-10-12 05:53:01] 2025-10-12 03:52:28,610 | INFO     | overall cleanup function is called
[2025-10-12 05:53:01] 2025-10-12 03:52:29,616 | INFO     | --- collectZombieJob: --- 10, [446868]
[2025-10-12 05:53:01] 2025-10-12 03:52:29,616 | INFO     | zombie collector waiting for pid 446868
[2025-10-12 05:53:01] 2025-10-12 03:52:29,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:53:01] 2025-10-12 03:52:29,616 | INFO     | collected zombie processes
[2025-10-12 05:53:01] 2025-10-12 03:52:29,616 | INFO     | will attempt to kill all subprocesses of pid=446868
[2025-10-12 05:53:01] 2025-10-12 03:52:29,648 | INFO     | process IDs to be killed: [446868] (in reverse order)
[2025-10-12 05:53:01] 2025-10-12 03:52:29,670 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:53:01] 2025-10-12 03:52:29,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:53:01] 2025-10-12 03:52:29,671 | INFO     | did not find any defunct processes belonging to 446868
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | did not find any defunct processes belonging to 446868
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | ready for new job
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | ***************************************
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | ***************************************
[2025-10-12 05:53:01] 2025-10-12 03:52:29,672 | INFO     | 
[2025-10-12 05:53:01] 2025-10-12 03:52:29,673 | INFO     | architecture information:
[2025-10-12 05:53:01] 2025-10-12 03:52:29,673 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:53:01] 2025-10-12 03:52:29,682 | INFO     | cat /etc/os-release:
[2025-10-12 05:53:01] NAME="CentOS Linux"
[2025-10-12 05:53:01] VERSION="7 (Core)"
[2025-10-12 05:53:01] ID="centos"
[2025-10-12 05:53:01] ID_LIKE="rhel fedora"
[2025-10-12 05:53:01] VERSION_ID="7"
[2025-10-12 05:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:53:01] ANSI_COLOR="0;31"
[2025-10-12 05:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:53:01] HOME_URL="https://www.centos.org/"
[2025-10-12 05:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:53:01] 
[2025-10-12 05:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:53:01] 
[2025-10-12 05:53:01] 2025-10-12 03:52:29,682 | INFO     | ***************************************
[2025-10-12 05:53:01] 2025-10-12 03:52:30,185 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | INFO     | sufficient remaining disk space (497161338880 B)
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | INFO     | update_server=False
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:53:01] 2025-10-12 03:52:30,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:53:01] 2025-10-12 03:52:30,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:53:01] 2025-10-12 03:52:30,196 | INFO     | aborting loop
[2025-10-12 05:53:01] 2025-10-12 03:52:30,700 | INFO     | all payload control threads have been joined
[2025-10-12 05:53:01] 2025-10-12 03:52:30,797 | INFO     | all job control threads have been joined
[2025-10-12 05:53:01] 2025-10-12 03:52:30,899 | INFO     | all data control threads have been joined
[2025-10-12 05:53:01] 2025-10-12 03:52:31,200 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,200 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,201 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,229 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,350 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,704 | INFO     | [payload] control thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,715 | INFO     | [job] validate thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,803 | INFO     | [job] control thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,805 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,840 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:31,904 | INFO     | [data] control thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:32,200 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:32,224 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:32,681 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:34,201 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:53:01] 2025-10-12 03:52:42,091 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:53:01] 2025-10-12 03:52:43,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669408745280)>', '<ExcThread(monitor, started 140668676589312)>']
[2025-10-12 05:53:01] 2025-10-12 03:52:48,464 | INFO     | all workflow threads have been joined
[2025-10-12 05:53:01] 2025-10-12 03:52:48,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:53:01] 2025-10-12 03:52:48,464 | INFO     | traces error code: 0
[2025-10-12 05:53:01] 2025-10-12 03:52:48,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | INFO     | PID=440460 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:53:01] 2025-10-12 03:53:01,205 | INFO     | [monitor] control thread has ended
[2025-10-12 05:53:01] 2025-10-12 03:53:01,245 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:53:01] 2025-10-12 03:53:01,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:53:01] 2025-10-12 03:53:01,250 [wrapper] pilotpid: 440460
[2025-10-12 05:53:01] 2025-10-12 03:53:01,252 [wrapper] Pilot exit status: 0
[2025-10-12 05:53:01] 2025-10-12 03:53:01,259 [wrapper] pandaids: 6838366053
[2025-10-12 05:53:01] 2025-10-12 03:53:01,271 [wrapper] cleanup supervisor_pilot  461420 440461
[2025-10-12 05:53:01] 2025-10-12 03:53:01,274 [wrapper] Test setup, not cleaning
[2025-10-12 05:53:01] 2025-10-12 03:53:01,276 [wrapper] apfmon messages muted
[2025-10-12 05:53:01] 2025-10-12 03:53:01,279 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:53:01] 2025-10-12 03:53:01,281 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:53:01]  *** Error codes and diagnostics ***
[2025-10-12 05:53:01]     "exeErrorCode": 0,
[2025-10-12 05:53:01]     "exeErrorDiag": "",
[2025-10-12 05:53:01]     "pilotErrorCode": 0,
[2025-10-12 05:53:01]     "pilotErrorDiag": "",
[2025-10-12 05:53:01]  *** Listing of results directory ***
[2025-10-12 05:53:01] total 415712
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc    557409 Oct 11 13:21 pilot3.tar.gz
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc      5112 Oct 11 13:37 queuedata.json
[2025-10-12 05:53:01] -rwx------ 1 boinc boinc     36292 Oct 11 13:37 runpilot2-wrapper.sh
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc       100 Oct 12 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:53:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 03:40 run_atlas
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc       105 Oct 12 03:40 job.xml
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc 220146456 Oct 12 03:40 EVNT.46676267._002287.pool.root.1
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc    569682 Oct 12 03:40 input.tar.gz
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:40 start_atlas.sh
[2025-10-12 05:53:01] drwxrwx--x 2 boinc boinc      4096 Oct 12 03:40 shared
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc         0 Oct 12 03:40 boinc_setup_complete
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc      6207 Oct 12 03:40 init_data.xml
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc         0 Oct 12 03:40 boinc_lockfile
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc      2550 Oct 12 03:40 pandaJob.out
[2025-10-12 05:53:01] -rw------- 1 boinc boinc    975496 Oct 12 03:40 agis_schedconf.cvmfs.json
[2025-10-12 05:53:01] -rw------- 1 boinc boinc   1560580 Oct 12 03:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:53:01] drwx------ 5 boinc boinc      4096 Oct 12 03:40 pilot3
[2025-10-12 05:53:01] -rw------- 1 boinc boinc 198810486 Oct 12 05:52 HITS.46676269._056971.pool.root.1
[2025-10-12 05:53:01] -rw------- 1 boinc boinc        95 Oct 12 05:52 pilot_heartbeat.json
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc       529 Oct 12 05:52 boinc_task_state.xml
[2025-10-12 05:53:01] -rw------- 1 boinc boinc      1017 Oct 12 05:52 memory_monitor_summary.json
[2025-10-12 05:53:01] -rw------- 1 boinc boinc    282434 Oct 12 05:52 log.46676269._056971.job.log.tgz.1
[2025-10-12 05:53:01] -rw------- 1 boinc boinc      7750 Oct 12 05:52 heartbeat.json
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:52 boinc_mmap_file
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc        27 Oct 12 05:52 wrapper_checkpoint.txt
[2025-10-12 05:53:01] -rw------- 1 boinc boinc       746 Oct 12 05:53 pilotlog.txt
[2025-10-12 05:53:01] -rw------- 1 boinc boinc   1135170 Oct 12 05:53 log.46676269._056971.job.log.1
[2025-10-12 05:53:01] -rw------- 1 boinc boinc       357 Oct 12 05:53 output.list
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:53 runtime_log
[2025-10-12 05:53:01] -rw------- 1 boinc boinc   1433600 Oct 12 05:53 result.tar.gz
[2025-10-12 05:53:01] -rw------- 1 boinc boinc       659 Oct 12 05:53 t7dLDmM6mR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbnRMDmCukDWn.diag
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc      8777 Oct 12 05:53 runtime_log.err
[2025-10-12 05:53:01] -rw-r--r-- 1 boinc boinc     21195 Oct 12 05:53 stderr.txt
[2025-10-12 05:53:01] HITS file was successfully produced:
[2025-10-12 05:53:01] -rw------- 1 boinc boinc 198810486 Oct 12 05:52 shared/HITS.pool.root.1
[2025-10-12 05:53:01]  *** Contents of shared directory: ***
[2025-10-12 05:53:01] total 411124
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc 220146456 Oct 12 03:40 ATLAS.root_0
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc    569682 Oct 12 03:40 input.tar.gz
[2025-10-12 05:53:01] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:40 start_atlas.sh
[2025-10-12 05:53:01] -rw------- 1 boinc boinc 198810486 Oct 12 05:52 HITS.pool.root.1
[2025-10-12 05:53:01] -rw------- 1 boinc boinc   1433600 Oct 12 05:53 result.tar.gz
05:53:02 (436757): run_atlas exited; CPU time 15333.230856
05:53:02 (436757): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN