Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:39 (19048): wrapper (7.7.26015): starting
09:53:39 (19048): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 09:53:39] Arguments: --nthreads 12
[2025-10-11 09:53:39] Threads: 12
[2025-10-11 09:53:39] Checking for CVMFS
[2025-10-11 09:53:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:53:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:53:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:53:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:53:39] 2.11.2.0 2987 221481 98656 151585 2 57 13119628 20275200 1 130560 1 107066375 99.984 13346574 12200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 09:53:39] CVMFS is ok
[2025-10-11 09:53:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:53:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:53:39] Further information can be found at the LHC@home message board.
[2025-10-11 09:53:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:53:39] Checking for apptainer binary...
[2025-10-11 09:53:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:53:39] Running /usr/bin/apptainer --version
[2025-10-11 09:53:39] apptainer version 1.3.2-1.el7
[2025-10-11 09:53:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:53:41] c-205-19.aglt2.org
[2025-10-11 09:53:41] apptainer works
[2025-10-11 09:53:41] Set ATHENA_PROC_NUMBER=12
[2025-10-11 09:53:41] Set ATHENA_CORE_NUMBER=12
[2025-10-11 09:53:41] Starting ATLAS job with PandaID=6838366007
[2025-10-11 09:53:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:13:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:13:09]  replicas=None
[2025-10-11 11:13:09]  scope=mc23_13p6TeV
[2025-10-11 11:13:09]  status=None
[2025-10-11 11:13:09]  status_code=0
[2025-10-11 11:13:09]  storage_token=
[2025-10-11 11:13:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838366007/log.46676269._056925.job.log.tgz.1
[2025-10-11 11:13:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/ba/log.46676269._056925.job.log.tgz.1
[2025-10-11 11:13:09]  workdir=None
[2025-10-11 11:13:09] ]
[2025-10-11 11:13:09] 2025-10-11 15:12:00,210 | INFO     | transferring file log.46676269._056925.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838366007/log.46676269._056925.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 11:13:09] 2025-10-11 15:12:00,210 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838366007/log.46676269._056925.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._056925.job
[2025-10-11 11:13:09] 2025-10-11 15:12:00,233 | INFO     | adding to output.list: log.46676269._056925.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/ba/log.46676269._056925.job.log.tg
[2025-10-11 11:13:09] 2025-10-11 15:12:00,234 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 11:13:09] 2025-10-11 15:12:00,234 | INFO     | summary of transferred files:
[2025-10-11 11:13:09] 2025-10-11 15:12:00,234 | INFO     |  -- lfn=log.46676269._056925.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 11:13:09] 2025-10-11 15:12:00,234 | INFO     | stage-out finished correctly
[2025-10-11 11:13:09] 2025-10-11 15:12:00,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 11:13:09] 2025-10-11 15:12:00,434 | INFO     | time since job start (4684s) is within the limit (172800.0s)
[2025-10-11 11:13:09] 2025-10-11 15:12:01,617 | INFO     | monitor loop #349: job 0:6838366007 is in state 'finished'
[2025-10-11 11:13:09] 2025-10-11 15:12:01,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:13:09] 2025-10-11 15:12:02,440 | INFO     | time since job start (4686s) is within the limit (172800.0s)
[2025-10-11 11:13:09] 2025-10-11 15:12:03,103 | INFO     | job 6838366007 has state=finished
[2025-10-11 11:13:09] 2025-10-11 15:12:03,103 | INFO     | preparing for final server update for job 6838366007 in state='finished'
[2025-10-11 11:13:09] 2025-10-11 15:12:03,103 | INFO     | this job has now completed (state=finished)
[2025-10-11 11:13:09] 2025-10-11 15:12:03,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 11:13:09] 2025-10-11 15:12:03,104 | INFO     | log transfer has been attempted: DONE
[2025-10-11 11:13:09] 2025-10-11 15:12:03,104 | INFO     | job 6838366007 has finished - writing final server update
[2025-10-11 11:13:09] 2025-10-11 15:12:03,104 | INFO     | total number of processed events: 400 (read)
[2025-10-11 11:13:09] 2025-10-11 15:12:03,105 | INFO     | executing command: lscpu
[2025-10-11 11:13:09] 2025-10-11 15:12:03,131 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 11:13:09] 2025-10-11 15:12:04,120 | INFO     | monitor loop #350: job 0:6838366007 is in state 'finished'
[2025-10-11 11:13:09] 2025-10-11 15:12:04,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:13:09] 2025-10-11 15:12:04,446 | INFO     | time since job start (4688s) is within the limit (172800.0s)
[2025-10-11 11:13:09] 2025-10-11 15:12:06,452 | INFO     | time since job start (4690s) is within the limit (172800.0s)
[2025-10-11 11:13:09] 2025-10-11 15:12:06,623 | INFO     | monitor loop #351: job 0:6838366007 is in state 'finished'
[2025-10-11 11:13:09] 2025-10-11 15:12:06,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:13:09] 2025-10-11 15:12:07,879 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 11:13:09] 2025-10-11 15:12:07,883 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-11 11:13:09] 2025-10-11 15:12:07,885 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838366007/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:13:09] 2025-10-11 15:12:07,886 | INFO     | extracted standard info from prmon json
[2025-10-11 11:13:09] 2025-10-11 15:12:07,886 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 11:13:09] 2025-10-11 15:12:07,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:13:09] 2025-10-11 15:12:07,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:13:09] 2025-10-11 15:12:07,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:13:09] 2025-10-11 15:12:07,889 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:13:09] 2025-10-11 15:12:07,889 | INFO     | sum of square deviations: 106336877.5
[2025-10-11 11:13:09] 2025-10-11 15:12:07,889 | INFO     | sum of deviations: -196839954.50000003
[2025-10-11 11:13:09] 2025-10-11 15:12:07,889 | INFO     | mean x: 1760193274.5
[2025-10-11 11:13:09] 2025-10-11 15:12:07,889 | INFO     | mean y: 2684736.0714285714
[2025-10-11 11:13:09] 2025-10-11 15:12:07,890 | INFO     | -- intersect: 3260974543.046305
[2025-10-11 11:13:09] 2025-10-11 15:12:07,890 | INFO     | intersect: 3260974543.046305
[2025-10-11 11:13:09] 2025-10-11 15:12:07,890 | INFO     | chi2: 0.034907988110260454
[2025-10-11 11:13:09] 2025-10-11 15:12:07,890 | INFO     | -- intersect: 3260974543.046305
[2025-10-11 11:13:09] 2025-10-11 15:12:07,890 | INFO     | current memory leak: -1.85 B/s (using 70 data points, chi2=0.03)
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | could have reported an average CPU frequency of 2054 MHz (6 samples)
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | ..............................
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . Timing measurements:
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . get job = 0 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . initial setup = 2 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . payload setup = 7 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . stage-in = 0 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . payload execution = 4656 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,891 | INFO     | . stage-out = 0 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,892 | INFO     | . log creation = 0 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,892 | INFO     | ..............................
[2025-10-11 11:13:09] 2025-10-11 15:12:07,973 | INFO     | 
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | job summary report
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | --------------------------------------------------
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | PanDA job id: 6838366007
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | task id: 46676269
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | errors: (none)
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:13:09] 2025-10-11 15:12:07,974 | INFO     | pilot state: finished 
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | transexitcode: 0
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | exeerrorcode: 0
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | exeerrordiag: 
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | exitcode: 0
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | exitmsg: OK
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | cpuconsumptiontime: 48495 s
[2025-10-11 11:13:09] 2025-10-11 15:12:07,975 | INFO     | nevents: 400
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | neventsw: 0
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | pid: 30104
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | pgrp: 30104
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | corecount: 12
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | event service: False
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4666: 2375364, 4667: 2384418, 4675: 2384556}
[2025-10-11 11:13:09] 2025-10-11 15:12:07,976 | INFO     | --------------------------------------------------
[2025-10-11 11:13:09] 2025-10-11 15:12:07,977 | INFO     | 
[2025-10-11 11:13:09] 2025-10-11 15:12:07,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 11:13:09] 2025-10-11 15:12:08,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,003 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:13:09] 2025-10-11 15:12:08,004 | INFO     | job 6838366007 has completed (purged errors)
[2025-10-11 11:13:09] 2025-10-11 15:12:08,004 | INFO     | overall cleanup function is called
[2025-10-11 11:13:09] 2025-10-11 15:12:09,012 | INFO     | --- collectZombieJob: --- 10, [30104]
[2025-10-11 11:13:09] 2025-10-11 15:12:09,012 | INFO     | zombie collector waiting for pid 30104
[2025-10-11 11:13:09] 2025-10-11 15:12:09,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:13:09] 2025-10-11 15:12:09,013 | INFO     | collected zombie processes
[2025-10-11 11:13:09] 2025-10-11 15:12:09,013 | INFO     | will attempt to kill all subprocesses of pid=30104
[2025-10-11 11:13:09] 2025-10-11 15:12:09,105 | INFO     | process IDs to be killed: [30104] (in reverse order)
[2025-10-11 11:13:09] 2025-10-11 15:12:09,201 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:13:09] 2025-10-11 15:12:09,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:13:09] 2025-10-11 15:12:09,205 | INFO     | did not find any defunct processes belonging to 30104
[2025-10-11 11:13:09] 2025-10-11 15:12:09,208 | INFO     | did not find any defunct processes belonging to 30104
[2025-10-11 11:13:09] 2025-10-11 15:12:09,208 | INFO     | ready for new job
[2025-10-11 11:13:09] 2025-10-11 15:12:09,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:13:09] 2025-10-11 15:12:09,209 | INFO     | ***************************************
[2025-10-11 11:13:09] 2025-10-11 15:12:09,210 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:13:09] 2025-10-11 15:12:09,210 | INFO     | ***************************************
[2025-10-11 11:13:09] 2025-10-11 15:12:09,210 | INFO     | 
[2025-10-11 11:13:09] 2025-10-11 15:12:09,210 | INFO     | architecture information:
[2025-10-11 11:13:09] 2025-10-11 15:12:09,211 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:13:09] 2025-10-11 15:12:09,225 | INFO     | cat /etc/os-release:
[2025-10-11 11:13:09] NAME="CentOS Linux"
[2025-10-11 11:13:09] VERSION="7 (Core)"
[2025-10-11 11:13:09] ID="centos"
[2025-10-11 11:13:09] ID_LIKE="rhel fedora"
[2025-10-11 11:13:09] VERSION_ID="7"
[2025-10-11 11:13:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:13:09] ANSI_COLOR="0;31"
[2025-10-11 11:13:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:13:09] HOME_URL="https://www.centos.org/"
[2025-10-11 11:13:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:13:09] 
[2025-10-11 11:13:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:13:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:13:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:13:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:13:09] 
[2025-10-11 11:13:09] 2025-10-11 15:12:09,226 | INFO     | ***************************************
[2025-10-11 11:13:09] 2025-10-11 15:12:09,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 11:13:09] 2025-10-11 15:12:09,745 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-11 11:13:09] 2025-10-11 15:12:09,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:13:09] 2025-10-11 15:12:09,746 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:13:09] 2025-10-11 15:12:09,746 | INFO     | update_server=False
[2025-10-11 11:13:09] 2025-10-11 15:12:09,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:13:09] 2025-10-11 15:12:09,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:13:09] 2025-10-11 15:12:09,839 | INFO     | all data control threads have been joined
[2025-10-11 11:13:09] 2025-10-11 15:12:10,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:13:09] 2025-10-11 15:12:10,132 | INFO     | aborting loop
[2025-10-11 11:13:09] 2025-10-11 15:12:10,355 | INFO     | all job control threads have been joined
[2025-10-11 11:13:09] 2025-10-11 15:12:10,752 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:10,752 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:10,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:13:09] 2025-10-11 15:12:10,844 | INFO     | [data] control thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:10,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:13:09] 2025-10-11 15:12:11,137 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,142 | INFO     | all payload control threads have been joined
[2025-10-11 11:13:09] 2025-10-11 15:12:11,161 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,299 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,360 | INFO     | [job] control thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,490 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,813 | INFO     | [job] validate thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,979 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:11,984 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:12,148 | INFO     | [payload] control thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:12,202 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:12,836 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:14,913 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:20,302 | INFO     | job.realtimelogging is not enabled
[2025-10-11 11:13:09] 2025-10-11 15:12:21,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:13:09] 2025-10-11 15:12:39,634 | INFO     | PID=23458 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 11:13:09] 2025-10-11 15:12:39,635 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:13:09] 2025-10-11 15:12:39,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:13:09] 2025-10-11 15:12:39,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:13:09] 2025-10-11 15:13:03,040 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:13:09] 2025-10-11 15:13:04,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251904485184)>', '<ExcThread(monitor, started 140251435603712)>']
[2025-10-11 11:13:09] 2025-10-11 15:13:04,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:13:09] 2025-10-11 15:13:04,755 | INFO     | [monitor] control thread has ended
[2025-10-11 11:13:09] 2025-10-11 15:13:09,480 | INFO     | all workflow threads have been joined
[2025-10-11 11:13:09] 2025-10-11 15:13:09,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:13:09] 2025-10-11 15:13:09,481 | INFO     | traces error code: 0
[2025-10-11 11:13:09] 2025-10-11 15:13:09,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:13:09] 2025-10-11 15:13:09,571 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:13:09] 2025-10-11 15:13:09,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:13:09] 2025-10-11 15:13:09,579 [wrapper] pilotpid: 23458
[2025-10-11 11:13:09] 2025-10-11 15:13:09,583 [wrapper] Pilot exit status: 0
[2025-10-11 11:13:09] 2025-10-11 15:13:09,598 [wrapper] pandaids: 6838366007
[2025-10-11 11:13:09] 2025-10-11 15:13:09,644 [wrapper] cleanup supervisor_pilot 19029 23459
[2025-10-11 11:13:09] 2025-10-11 15:13:09,647 [wrapper] Test setup, not cleaning
[2025-10-11 11:13:09] 2025-10-11 15:13:09,651 [wrapper] apfmon messages muted
[2025-10-11 11:13:09] 2025-10-11 15:13:09,655 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:13:09] 2025-10-11 15:13:09,659 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:13:09]  *** Error codes and diagnostics ***
[2025-10-11 11:13:09]     "exeErrorCode": 0,
[2025-10-11 11:13:09]     "exeErrorDiag": "",
[2025-10-11 11:13:09]     "pilotErrorCode": 0,
[2025-10-11 11:13:09]     "pilotErrorDiag": "",
[2025-10-11 11:13:09]  *** Listing of results directory ***
[2025-10-11 11:13:09] total 416300
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 07:21 pilot3.tar.gz
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 07:32 queuedata.json
[2025-10-11 11:13:09] -rwx------ 1 boincer umatlas     36292 Oct 11 07:33 runpilot2-wrapper.sh
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas       100 Oct 11 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:13:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 09:53 run_atlas
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas       105 Oct 11 09:53 job.xml
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas 221187354 Oct 11 09:53 EVNT.46676267._002285.pool.root.1
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 09:53 start_atlas.sh
[2025-10-11 11:13:09] drwxrwx--x 2 boincer umatlas      4096 Oct 11 09:53 shared
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 09:53 input.tar.gz
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas         0 Oct 11 09:53 boinc_lockfile
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 09:53 pandaJob.out
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas    975520 Oct 11 09:53 agis_schedconf.cvmfs.json
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas   1560580 Oct 11 09:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:13:09] drwx------ 5 boincer umatlas      4096 Oct 11 09:53 pilot3
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 11:09 init_data.xml
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas 199071561 Oct 11 11:11 HITS.46676269._056925.pool.root.1
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas       530 Oct 11 11:11 boinc_task_state.xml
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas      1050 Oct 11 11:11 memory_monitor_summary.json
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas        95 Oct 11 11:11 pilot_heartbeat.json
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas    390554 Oct 11 11:12 log.46676269._056925.job.log.tgz.1
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas      7863 Oct 11 11:12 heartbeat.json
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 11:12 boinc_mmap_file
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas        27 Oct 11 11:12 wrapper_checkpoint.txt
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas      4818 Oct 11 11:13 pilotlog.txt
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas    678935 Oct 11 11:13 log.46676269._056925.job.log.1
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas       357 Oct 11 11:13 output.list
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas       620 Oct 11 11:13 runtime_log
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas   1085440 Oct 11 11:13 result.tar.gz
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas       659 Oct 11 11:13 yZPLDmR2mR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbKgNDmamTRHn.diag
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 11:13 runtime_log.err
[2025-10-11 11:13:09] -rw-r--r-- 1 boincer umatlas     21806 Oct 11 11:13 stderr.txt
[2025-10-11 11:13:09] HITS file was successfully produced:
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas 199071561 Oct 11 11:11 shared/HITS.pool.root.1
[2025-10-11 11:13:09]  *** Contents of shared directory: ***
[2025-10-11 11:13:09] total 412048
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas 221187354 Oct 11 09:53 ATLAS.root_0
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 09:53 start_atlas.sh
[2025-10-11 11:13:09] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 09:53 input.tar.gz
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas 199071561 Oct 11 11:11 HITS.pool.root.1
[2025-10-11 11:13:09] -rw------- 1 boincer umatlas   1085440 Oct 11 11:13 result.tar.gz
11:13:11 (19048): run_atlas exited; CPU time 48469.731928
11:13:11 (19048): called boinc_finish(0)

</stderr_txt>
]]>

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