Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:58:22 (1442829): wrapper (7.7.26015): starting
14:58:22 (1442829): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:58:22] Arguments: --nthreads 12
[2025-10-11 14:58:22] Threads: 12
[2025-10-11 14:58:22] Checking for CVMFS
[2025-10-11 14:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:58:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:58:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:58:22] 2.11.0.0 3299214 1772 83896 151587 2 188 5151994 6144000 12111 130560 0 34784372 100.000 64542 208 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 14:58:22] CVMFS is ok
[2025-10-11 14:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:58:22] Checking for apptainer binary...
[2025-10-11 14:58:22] apptainer is not installed, using version from CVMFS
[2025-10-11 14:58:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:58:23] radiat0r
[2025-10-11 14:58:23] apptainer works
[2025-10-11 14:58:23] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:58:23] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:58:23] Starting ATLAS job with PandaID=6838066364
[2025-10-11 14:58:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:51:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:51:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/37/log.46676269._050901.job.log.tgz.1
[2025-10-11 15:51:48]  workdir=None
[2025-10-11 15:51:48] ]
[2025-10-11 15:51:48] 2025-10-11 15:50:27,383 | INFO     | transferring file log.46676269._050901.job.log.tgz.1 from /var/lib/boinc/slots/21/PanDA_Pilot-6838066364/log.46676269._050901.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 15:51:48] 2025-10-11 15:50:27,383 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/21/PanDA_Pilot-6838066364/log.46676269._050901.job.log.tgz.1 /var/lib/boinc/slots/21/log.46676269._050901.j
[2025-10-11 15:51:48] 2025-10-11 15:50:27,413 | INFO     | adding to output.list: log.46676269._050901.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/37/log.46676269._050901.job.log.tg
[2025-10-11 15:51:48] 2025-10-11 15:50:27,414 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:51:48] 2025-10-11 15:50:27,415 | INFO     | summary of transferred files:
[2025-10-11 15:51:48] 2025-10-11 15:50:27,415 | INFO     |  -- lfn=log.46676269._050901.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:51:48] 2025-10-11 15:50:27,415 | INFO     | stage-out finished correctly
[2025-10-11 15:51:48] 2025-10-11 15:50:28,326 | INFO     | time since job start (3111s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:28,398 | INFO     | monitor loop #218: job 0:6838066364 is in state 'finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:28,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:51:48] 2025-10-11 15:50:30,330 | INFO     | time since job start (3113s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:30,878 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:51:48] 2025-10-11 15:50:30,907 | INFO     | monitor loop #219: job 0:6838066364 is in state 'finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:30,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:51:48] 2025-10-11 15:50:31,578 | INFO     | job 6838066364 has state=finished
[2025-10-11 15:51:48] 2025-10-11 15:50:31,579 | INFO     | preparing for final server update for job 6838066364 in state='finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:31,579 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:51:48] 2025-10-11 15:50:31,580 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:51:48] 2025-10-11 15:50:31,580 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:51:48] 2025-10-11 15:50:31,580 | INFO     | job 6838066364 has finished - writing final server update
[2025-10-11 15:51:48] 2025-10-11 15:50:31,580 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:51:48] 2025-10-11 15:50:31,581 | INFO     | executing command: lscpu
[2025-10-11 15:51:48] 2025-10-11 15:50:31,788 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:51:48] 2025-10-11 15:50:32,336 | INFO     | time since job start (3115s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:33,431 | INFO     | monitor loop #220: job 0:6838066364 is in state 'finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:33,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:51:48] 2025-10-11 15:50:34,342 | INFO     | time since job start (3117s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:35,935 | INFO     | monitor loop #221: job 0:6838066364 is in state 'finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:35,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:51:48] 2025-10-11 15:50:36,348 | INFO     | time since job start (3119s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,354 | INFO     | time since job start (3121s) is within the limit (172800.0s)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,438 | INFO     | monitor loop #222: job 0:6838066364 is in state 'finished'
[2025-10-11 15:51:48] 2025-10-11 15:50:38,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 15:51:48] 2025-10-11 15:50:38,721 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2362.317171875
[2025-10-11 15:51:48] 2025-10-11 15:50:38,790 | INFO     | using path: /var/lib/boinc/slots/21/PanDA_Pilot-6838066364/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,791 | INFO     | extracted standard info from prmon json
[2025-10-11 15:51:48] 2025-10-11 15:50:38,791 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:51:48] 2025-10-11 15:50:38,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:51:48] 2025-10-11 15:50:38,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:51:48] 2025-10-11 15:50:38,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:51:48] 2025-10-11 15:50:38,793 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | sum of square deviations: 26400495.0
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | sum of deviations: 1105516755.4999998
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | mean x: 1760196367.5
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | mean y: 2640798.5681818184
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | -- intersect: -73705317224.24486
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | intersect: -73705317224.24486
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | chi2: 0.033433413216790255
[2025-10-11 15:51:48] 2025-10-11 15:50:38,794 | INFO     | -- intersect: -73705317224.24486
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | current memory leak: 41.87 B/s (using 44 data points, chi2=0.03)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | ..............................
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | . Timing measurements:
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | . get job = 0 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | . initial setup = 1 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,795 | INFO     | . payload setup = 8 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,796 | INFO     | . stage-in = 0 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,796 | INFO     | . payload execution = 3079 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,796 | INFO     | . stage-out = 0 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,796 | INFO     | . log creation = 0 s
[2025-10-11 15:51:48] 2025-10-11 15:50:38,796 | INFO     | ..............................
[2025-10-11 15:51:48] 2025-10-11 15:50:39,385 | INFO     | 
[2025-10-11 15:51:48] 2025-10-11 15:50:39,385 | INFO     | job summary report
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | --------------------------------------------------
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | PanDA job id: 6838066364
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | task id: 46676269
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | errors: (none)
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | pilot state: finished 
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | transexitcode: 0
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | exeerrorcode: 0
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | exeerrordiag: 
[2025-10-11 15:51:48] 2025-10-11 15:50:39,386 | INFO     | exitcode: 0
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | exitmsg: OK
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | cpuconsumptiontime: 32126 s
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | nevents: 400
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | neventsw: 0
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | pid: 1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | pgrp: 1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | corecount: 12
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | event service: False
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | sizes: {0: 2348859, 7: 2349121, 11: 2349149, 3092: 2374692, 3093: 2383692, 3096: 2383748, 3104: 2384102}
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | --------------------------------------------------
[2025-10-11 15:51:48] 2025-10-11 15:50:39,387 | INFO     | 
[2025-10-11 15:51:48] 2025-10-11 15:50:39,388 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-10-11 15:51:48] 2025-10-11 15:50:39,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | job 6838066364 has completed (purged errors)
[2025-10-11 15:51:48] 2025-10-11 15:50:39,422 | INFO     | overall cleanup function is called
[2025-10-11 15:51:48] 2025-10-11 15:50:40,430 | INFO     | --- collectZombieJob: --- 10, [1483261]
[2025-10-11 15:51:48] 2025-10-11 15:50:40,431 | INFO     | zombie collector waiting for pid 1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:40,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:51:48] 2025-10-11 15:50:40,431 | INFO     | collected zombie processes
[2025-10-11 15:51:48] 2025-10-11 15:50:40,431 | INFO     | will attempt to kill all subprocesses of pid=1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:41,034 | INFO     | process IDs to be killed: [1483261] (in reverse order)
[2025-10-11 15:51:48] 2025-10-11 15:50:41,320 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:51:48] 2025-10-11 15:50:41,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:51:48] 2025-10-11 15:50:41,350 | INFO     | did not find any defunct processes belonging to 1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:41,376 | INFO     | did not find any defunct processes belonging to 1483261
[2025-10-11 15:51:48] 2025-10-11 15:50:41,377 | INFO     | ready for new job
[2025-10-11 15:51:48] 2025-10-11 15:50:41,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:51:48] 2025-10-11 15:50:41,381 | INFO     | ***************************************
[2025-10-11 15:51:48] 2025-10-11 15:50:41,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:51:48] 2025-10-11 15:50:41,381 | INFO     | ***************************************
[2025-10-11 15:51:48] 2025-10-11 15:50:41,382 | INFO     | 
[2025-10-11 15:51:48] 2025-10-11 15:50:41,423 | INFO     | architecture information:
[2025-10-11 15:51:48] 2025-10-11 15:50:41,424 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:51:48] 2025-10-11 15:50:41,449 | INFO     | cat /etc/os-release:
[2025-10-11 15:51:48] NAME="CentOS Linux"
[2025-10-11 15:51:48] VERSION="7 (Core)"
[2025-10-11 15:51:48] ID="centos"
[2025-10-11 15:51:48] ID_LIKE="rhel fedora"
[2025-10-11 15:51:48] VERSION_ID="7"
[2025-10-11 15:51:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:51:48] ANSI_COLOR="0;31"
[2025-10-11 15:51:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:51:48] HOME_URL="https://www.centos.org/"
[2025-10-11 15:51:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:51:48] 
[2025-10-11 15:51:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:51:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:51:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:51:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:51:48] 
[2025-10-11 15:51:48] 2025-10-11 15:50:41,449 | INFO     | ***************************************
[2025-10-11 15:51:48] 2025-10-11 15:50:41,953 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-10-11 15:51:48] 2025-10-11 15:50:41,984 | INFO     | sufficient remaining disk space (1725043834880 B)
[2025-10-11 15:51:48] 2025-10-11 15:50:41,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:51:48] 2025-10-11 15:50:41,985 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:51:48] 2025-10-11 15:50:41,985 | INFO     | update_server=False
[2025-10-11 15:51:48] 2025-10-11 15:50:41,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:51:48] 2025-10-11 15:50:41,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:51:48] 2025-10-11 15:50:41,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:51:48] 2025-10-11 15:50:41,987 | INFO     | aborting loop
[2025-10-11 15:51:48] 2025-10-11 15:50:42,807 | INFO     | all data control threads have been joined
[2025-10-11 15:51:48] 2025-10-11 15:50:42,990 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:42,991 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:51:48] 2025-10-11 15:50:43,110 | INFO     | all job control threads have been joined
[2025-10-11 15:51:48] 2025-10-11 15:50:43,234 | INFO     | all payload control threads have been joined
[2025-10-11 15:51:48] 2025-10-11 15:50:43,326 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,464 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,499 | INFO     | [job] validate thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,767 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,813 | INFO     | [data] control thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,871 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:43,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:51:48] 2025-10-11 15:50:44,114 | INFO     | [job] control thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:44,238 | INFO     | [payload] control thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:44,262 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:44,915 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:45,040 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:50:45,992 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:51:48] 2025-10-11 15:51:12,426 | INFO     | PID=1454943 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:51:48] 2025-10-11 15:51:12,426 | INFO     | .. there are 17 such processes running
[2025-10-11 15:51:48] 2025-10-11 15:51:12,426 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:51:48] 2025-10-11 15:51:12,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:51:48] 2025-10-11 15:51:12,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:51:48] 2025-10-11 15:51:41,462 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:51:48] 2025-10-11 15:51:42,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346227156800)>', '<ExcThread(monitor, started 140345924884224)>']
[2025-10-11 15:51:48] 2025-10-11 15:51:42,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:51:48] 2025-10-11 15:51:42,568 | INFO     | [monitor] control thread has ended
[2025-10-11 15:51:48] 2025-10-11 15:51:47,490 | INFO     | all workflow threads have been joined
[2025-10-11 15:51:48] 2025-10-11 15:51:47,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:51:48] 2025-10-11 15:51:47,491 | INFO     | traces error code: 0
[2025-10-11 15:51:48] 2025-10-11 15:51:47,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:51:48] 2025-10-11 15:51:47,690 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:51:48] 2025-10-11 15:51:47,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:51:48] 2025-10-11 15:51:47,698 [wrapper] pilotpid: 1454943
[2025-10-11 15:51:48] 2025-10-11 15:51:47,702 [wrapper] Pilot exit status: 0
[2025-10-11 15:51:48] 2025-10-11 15:51:47,716 [wrapper] pandaids: 6838066364
[2025-10-11 15:51:48] 2025-10-11 15:51:47,895 [wrapper] cleanup supervisor_pilot 1841838 1454944
[2025-10-11 15:51:48] 2025-10-11 15:51:47,899 [wrapper] Test setup, not cleaning
[2025-10-11 15:51:48] 2025-10-11 15:51:47,902 [wrapper] apfmon messages muted
[2025-10-11 15:51:48] 2025-10-11 15:51:47,905 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:51:48] 2025-10-11 15:51:47,907 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:51:48]  *** Error codes and diagnostics ***
[2025-10-11 15:51:48]     "exeErrorCode": 0,
[2025-10-11 15:51:48]     "exeErrorDiag": "",
[2025-10-11 15:51:48]     "pilotErrorCode": 0,
[2025-10-11 15:51:48]     "pilotErrorDiag": "",
[2025-10-11 15:51:48]  *** Listing of results directory ***
[2025-10-11 15:51:48] total 408208
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc    557409 Oct 11 03:42 pilot3.tar.gz
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc      5112 Oct 11 04:10 queuedata.json
[2025-10-11 15:51:48] -rwx------ 1 boinc boinc     36292 Oct 11 04:10 runpilot2-wrapper.sh
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:51:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:58 run_atlas
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:58 job.xml
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:58 start_atlas.sh
[2025-10-11 15:51:48] drwxrwx--x 2 boinc boinc      4096 Oct 11 14:58 shared
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc    569680 Oct 11 14:58 input.tar.gz
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc 219987632 Oct 11 14:58 EVNT.46676267._002048.pool.root.1
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:58 boinc_setup_complete
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc      9396 Oct 11 14:58 init_data.xml
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:58 boinc_lockfile
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc      2551 Oct 11 14:58 pandaJob.out
[2025-10-11 15:51:48] -rw------- 1 boinc boinc    975536 Oct 11 14:58 agis_schedconf.cvmfs.json
[2025-10-11 15:51:48] -rw------- 1 boinc boinc   1560580 Oct 11 14:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:51:48] drwx------ 5 boinc boinc      4096 Oct 11 14:58 pilot3
[2025-10-11 15:51:48] -rw------- 1 boinc boinc 192448078 Oct 11 15:49 HITS.46676269._050901.pool.root.1
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc       530 Oct 11 15:49 boinc_task_state.xml
[2025-10-11 15:51:48] -rw------- 1 boinc boinc      1029 Oct 11 15:50 memory_monitor_summary.json
[2025-10-11 15:51:48] -rw------- 1 boinc boinc        95 Oct 11 15:50 pilot_heartbeat.json
[2025-10-11 15:51:48] -rw------- 1 boinc boinc    363545 Oct 11 15:50 log.46676269._050901.job.log.tgz.1
[2025-10-11 15:51:48] -rw------- 1 boinc boinc      7742 Oct 11 15:50 heartbeat.json
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:51 boinc_mmap_file
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:51 wrapper_checkpoint.txt
[2025-10-11 15:51:48] -rw------- 1 boinc boinc      4827 Oct 11 15:51 pilotlog.txt
[2025-10-11 15:51:48] -rw------- 1 boinc boinc    463717 Oct 11 15:51 log.46676269._050901.job.log.1
[2025-10-11 15:51:48] -rw------- 1 boinc boinc       357 Oct 11 15:51 output.list
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:51 runtime_log
[2025-10-11 15:51:48] -rw------- 1 boinc boinc    849920 Oct 11 15:51 result.tar.gz
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc      8672 Oct 11 15:51 runtime_log.err
[2025-10-11 15:51:48] -rw------- 1 boinc boinc       643 Oct 11 15:51 63LLDm86fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmT8QMDmFNKd1n.diag
[2025-10-11 15:51:48] -rw-r--r-- 1 boinc boinc     22020 Oct 11 15:51 stderr.txt
[2025-10-11 15:51:48] HITS file was successfully produced:
[2025-10-11 15:51:48] -rw------- 1 boinc boinc 192448078 Oct 11 15:49 shared/HITS.pool.root.1
[2025-10-11 15:51:48]  *** Contents of shared directory: ***
[2025-10-11 15:51:48] total 404188
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:58 start_atlas.sh
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc    569680 Oct 11 14:58 input.tar.gz
[2025-10-11 15:51:48] -rw-r--r-- 2 boinc boinc 219987632 Oct 11 14:58 ATLAS.root_0
[2025-10-11 15:51:48] -rw------- 1 boinc boinc 192448078 Oct 11 15:49 HITS.pool.root.1
[2025-10-11 15:51:48] -rw------- 1 boinc boinc    849920 Oct 11 15:51 result.tar.gz
15:51:49 (1442829): run_atlas exited; CPU time 32325.780661
15:51:49 (1442829): called boinc_finish(0)

</stderr_txt>
]]>

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