Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
14:27:16 (1255463): wrapper (7.7.26015): starting
14:27:16 (1255463): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 14:27:16] Arguments: --nthreads 12
[2025-10-11 14:27:16] Threads: 12
[2025-10-11 14:27:16] Checking for CVMFS
[2025-10-11 14:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:27:17] 2.11.0.0 3299214 1741 85376 151587 1 188 5151994 6144000 14533 130560 0 34344026 100.000 64537 208 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 14:27:17] CVMFS is ok
[2025-10-11 14:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:27:17] Checking for apptainer binary...
[2025-10-11 14:27:17] apptainer is not installed, using version from CVMFS
[2025-10-11 14:27:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:27:17] radiat0r
[2025-10-11 14:27:17] apptainer works
[2025-10-11 14:27:17] Set ATHENA_PROC_NUMBER=12
[2025-10-11 14:27:17] Set ATHENA_CORE_NUMBER=12
[2025-10-11 14:27:17] Starting ATLAS job with PandaID=6828323653
[2025-10-11 14:27:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:12:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:12:43]  storage_token=
[2025-10-11 15:12:43]  surl=/var/lib/boinc/slots/11/PanDA_Pilot-6828323653/log.46376905._040391.job.log.tgz.1
[2025-10-11 15:12:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ba/log.46376905._040391.job.log.tgz.1
[2025-10-11 15:12:43]  workdir=None
[2025-10-11 15:12:43] ]
[2025-10-11 15:12:43] 2025-10-11 15:11:46,249 | INFO     | transferring file log.46376905._040391.job.log.tgz.1 from /var/lib/boinc/slots/11/PanDA_Pilot-6828323653/log.46376905._040391.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 15:12:43] 2025-10-11 15:11:46,249 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/11/PanDA_Pilot-6828323653/log.46376905._040391.job.log.tgz.1 /var/lib/boinc/slots/11/log.46376905._040391.j
[2025-10-11 15:12:43] 2025-10-11 15:11:46,274 | INFO     | adding to output.list: log.46376905._040391.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/ba/log.46376905._040391.job.log.tg
[2025-10-11 15:12:43] 2025-10-11 15:11:46,275 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:12:43] 2025-10-11 15:11:46,276 | INFO     | summary of transferred files:
[2025-10-11 15:12:43] 2025-10-11 15:11:46,276 | INFO     |  -- lfn=log.46376905._040391.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:12:43] 2025-10-11 15:11:46,276 | INFO     | stage-out finished correctly
[2025-10-11 15:12:43] 2025-10-11 15:11:47,738 | INFO     | monitor loop #187: job 0:6828323653 is in state 'finished'
[2025-10-11 15:12:43] 2025-10-11 15:11:47,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:12:43] 2025-10-11 15:11:47,989 | INFO     | time since job start (2653s) is within the limit (172800.0s)
[2025-10-11 15:12:43] 2025-10-11 15:11:47,989 | INFO     | 2657s have passed since pilot start - server update state is 'RUNNING'
[2025-10-11 15:12:43] 2025-10-11 15:11:48,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:12:43] 2025-10-11 15:11:48,649 | INFO     | job 6828323653 has state=finished
[2025-10-11 15:12:43] 2025-10-11 15:11:48,649 | INFO     | preparing for final server update for job 6828323653 in state='finished'
[2025-10-11 15:12:43] 2025-10-11 15:11:48,650 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:12:43] 2025-10-11 15:11:48,650 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:12:43] 2025-10-11 15:11:48,650 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:12:43] 2025-10-11 15:11:48,651 | INFO     | job 6828323653 has finished - writing final server update
[2025-10-11 15:12:43] 2025-10-11 15:11:48,651 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:12:43] 2025-10-11 15:11:48,653 | INFO     | executing command: lscpu
[2025-10-11 15:12:43] 2025-10-11 15:11:48,843 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:12:43] 2025-10-11 15:11:49,995 | INFO     | time since job start (2655s) is within the limit (172800.0s)
[2025-10-11 15:12:43] 2025-10-11 15:11:50,241 | INFO     | monitor loop #188: job 0:6828323653 is in state 'finished'
[2025-10-11 15:12:43] 2025-10-11 15:11:50,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:12:43] 2025-10-11 15:11:51,999 | INFO     | time since job start (2657s) is within the limit (172800.0s)
[2025-10-11 15:12:43] 2025-10-11 15:11:52,744 | INFO     | monitor loop #189: job 0:6828323653 is in state 'finished'
[2025-10-11 15:12:43] 2025-10-11 15:11:52,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,004 | INFO     | time since job start (2660s) is within the limit (172800.0s)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,490 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 15:12:43] 2025-10-11 15:11:54,553 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2231.709234375
[2025-10-11 15:12:43] 2025-10-11 15:11:54,630 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6828323653/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,630 | INFO     | extracted standard info from prmon json
[2025-10-11 15:12:43] 2025-10-11 15:11:54,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:12:43] 2025-10-11 15:11:54,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:12:43] 2025-10-11 15:11:54,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:12:43] 2025-10-11 15:11:54,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:12:43] 2025-10-11 15:11:54,633 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:12:43] 2025-10-11 15:11:54,633 | INFO     | sum of square deviations: 14456085.0
[2025-10-11 15:12:43] 2025-10-11 15:11:54,633 | INFO     | sum of deviations: 288121818.5
[2025-10-11 15:12:43] 2025-10-11 15:11:54,633 | INFO     | mean x: 1760194260.5
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | mean y: 2670868.25
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | -- intersect: -35079467293.53603
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | intersect: -35079467293.53603
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | chi2: 0.0010235355765918887
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | -- intersect: -35079467293.53603
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | current memory leak: 19.93 B/s (using 36 data points, chi2=0.00)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | could have reported an average CPU frequency of 2295 MHz (5 samples)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | ..............................
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | . Timing measurements:
[2025-10-11 15:12:43] 2025-10-11 15:11:54,634 | INFO     | . get job = 0 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . initial setup = 3 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . payload setup = 8 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . stage-in = 0 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . payload execution = 2619 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . stage-out = 0 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | . log creation = 0 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,635 | INFO     | ..............................
[2025-10-11 15:12:43] 2025-10-11 15:11:54,698 | INFO     | 
[2025-10-11 15:12:43] 2025-10-11 15:11:54,698 | INFO     | job summary report
[2025-10-11 15:12:43] 2025-10-11 15:11:54,698 | INFO     | --------------------------------------------------
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | PanDA job id: 6828323653
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | task id: 46376905
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | errors: (none)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | pilot state: finished 
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | transexitcode: 0
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | exeerrorcode: 0
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | exeerrordiag: 
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | exitcode: 0
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | exitmsg: OK
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | cpuconsumptiontime: 27410 s
[2025-10-11 15:12:43] 2025-10-11 15:11:54,699 | INFO     | nevents: 400
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | neventsw: 0
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | pid: 1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | pgrp: 1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | corecount: 12
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | event service: False
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | sizes: {0: 2348816, 7: 2349078, 11: 2349106, 2631: 2374330, 2634: 2383330, 2636: 2383386, 2642: 2383740}
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | --------------------------------------------------
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | 
[2025-10-11 15:12:43] 2025-10-11 15:11:54,700 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-11 15:12:43] 2025-10-11 15:11:54,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:12:43] 2025-10-11 15:11:54,726 | INFO     | job 6828323653 has completed (purged errors)
[2025-10-11 15:12:43] 2025-10-11 15:11:54,726 | INFO     | overall cleanup function is called
[2025-10-11 15:12:43] 2025-10-11 15:11:55,735 | INFO     | --- collectZombieJob: --- 10, [1270308]
[2025-10-11 15:12:43] 2025-10-11 15:11:55,736 | INFO     | zombie collector waiting for pid 1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:55,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:12:43] 2025-10-11 15:11:55,736 | INFO     | collected zombie processes
[2025-10-11 15:12:43] 2025-10-11 15:11:55,736 | INFO     | will attempt to kill all subprocesses of pid=1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:56,513 | INFO     | process IDs to be killed: [1270308] (in reverse order)
[2025-10-11 15:12:43] 2025-10-11 15:11:56,773 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:12:43] 2025-10-11 15:11:56,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:12:43] 2025-10-11 15:11:56,802 | INFO     | did not find any defunct processes belonging to 1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:56,827 | INFO     | did not find any defunct processes belonging to 1270308
[2025-10-11 15:12:43] 2025-10-11 15:11:56,827 | INFO     | ready for new job
[2025-10-11 15:12:43] 2025-10-11 15:11:56,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:12:43] 2025-10-11 15:11:56,829 | INFO     | ***************************************
[2025-10-11 15:12:43] 2025-10-11 15:11:56,829 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 15:12:43] 2025-10-11 15:11:56,829 | INFO     | ***************************************
[2025-10-11 15:12:43] 2025-10-11 15:11:56,829 | INFO     | 
[2025-10-11 15:12:43] 2025-10-11 15:11:56,864 | INFO     | architecture information:
[2025-10-11 15:12:43] 2025-10-11 15:11:56,864 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:12:43] 2025-10-11 15:11:56,892 | INFO     | cat /etc/os-release:
[2025-10-11 15:12:43] NAME="CentOS Linux"
[2025-10-11 15:12:43] VERSION="7 (Core)"
[2025-10-11 15:12:43] ID="centos"
[2025-10-11 15:12:43] ID_LIKE="rhel fedora"
[2025-10-11 15:12:43] VERSION_ID="7"
[2025-10-11 15:12:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:12:43] ANSI_COLOR="0;31"
[2025-10-11 15:12:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:12:43] HOME_URL="https://www.centos.org/"
[2025-10-11 15:12:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:12:43] 
[2025-10-11 15:12:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:12:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:12:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:12:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:12:43] 
[2025-10-11 15:12:43] 2025-10-11 15:11:56,892 | INFO     | ***************************************
[2025-10-11 15:12:43] 2025-10-11 15:11:57,395 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-11 15:12:43] 2025-10-11 15:11:57,423 | INFO     | sufficient remaining disk space (1725434953728 B)
[2025-10-11 15:12:43] 2025-10-11 15:11:57,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:12:43] 2025-10-11 15:11:57,423 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:12:43] 2025-10-11 15:11:57,423 | INFO     | update_server=False
[2025-10-11 15:12:43] 2025-10-11 15:11:57,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:12:43] 2025-10-11 15:11:57,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:12:43] 2025-10-11 15:11:57,754 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 15:12:43] 2025-10-11 15:11:57,755 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 15:12:43] 2025-10-11 15:11:57,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:12:43] 2025-10-11 15:11:57,755 | INFO     | will abort loop
[2025-10-11 15:12:43] 2025-10-11 15:11:57,926 | INFO     | all data control threads have been joined
[2025-10-11 15:12:43] 2025-10-11 15:11:57,989 | INFO     | all payload control threads have been joined
[2025-10-11 15:12:43] 2025-10-11 15:11:58,429 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,463 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,543 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,760 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,927 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,930 | INFO     | [data] control thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:58,995 | INFO     | [payload] control thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,032 | INFO     | all job control threads have been joined
[2025-10-11 15:12:43] 2025-10-11 15:11:59,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:12:43] 2025-10-11 15:11:59,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,362 | INFO     | [job] validate thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,406 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,426 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,550 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:11:59,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:12:43] 2025-10-11 15:11:59,726 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:12:00,038 | INFO     | [job] control thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:12:00,713 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:12:03,168 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:12:43] 2025-10-11 15:12:27,844 | INFO     | PID=1262155 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:12:43] 2025-10-11 15:12:27,844 | INFO     | .. there are 16 such processes running
[2025-10-11 15:12:43] 2025-10-11 15:12:27,845 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:12:43] 2025-10-11 15:12:27,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:12:43] 2025-10-11 15:12:27,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:12:43] 2025-10-11 15:12:29,383 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-11 15:12:43] 2025-10-11 15:12:37,850 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:12:43] 2025-10-11 15:12:38,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048527955776)>', '<ExcThread(monitor, started 140047869273856)>']
[2025-10-11 15:12:43] 2025-10-11 15:12:38,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:12:43] 2025-10-11 15:12:38,890 | INFO     | [monitor] control thread has ended
[2025-10-11 15:12:43] 2025-10-11 15:12:43,078 | INFO     | all workflow threads have been joined
[2025-10-11 15:12:43] 2025-10-11 15:12:43,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:12:43] 2025-10-11 15:12:43,079 | INFO     | traces error code: 0
[2025-10-11 15:12:43] 2025-10-11 15:12:43,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:12:43] 2025-10-11 15:12:43,217 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:12:43] 2025-10-11 15:12:43,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:12:43] 2025-10-11 15:12:43,224 [wrapper] pilotpid: 1262155
[2025-10-11 15:12:43] 2025-10-11 15:12:43,228 [wrapper] Pilot exit status: 0
[2025-10-11 15:12:43] 2025-10-11 15:12:43,240 [wrapper] pandaids: 6828323653
[2025-10-11 15:12:43] 2025-10-11 15:12:43,407 [wrapper] cleanup supervisor_pilot 1567886 1262156
[2025-10-11 15:12:43] 2025-10-11 15:12:43,410 [wrapper] Test setup, not cleaning
[2025-10-11 15:12:43] 2025-10-11 15:12:43,413 [wrapper] apfmon messages muted
[2025-10-11 15:12:43] 2025-10-11 15:12:43,415 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:12:43] 2025-10-11 15:12:43,418 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:12:43]  *** Error codes and diagnostics ***
[2025-10-11 15:12:43]     "exeErrorCode": 0,
[2025-10-11 15:12:43]     "exeErrorDiag": "",
[2025-10-11 15:12:43]     "pilotErrorCode": 0,
[2025-10-11 15:12:43]     "pilotErrorDiag": "",
[2025-10-11 15:12:43]  *** Listing of results directory ***
[2025-10-11 15:12:43] total 387388
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc    552446 Oct  3 11:01 pilot3.tar.gz
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc      5112 Oct  3 11:05 queuedata.json
[2025-10-11 15:12:43] -rwx------ 1 boinc boinc     36292 Oct  3 11:06 runpilot2-wrapper.sh
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:12:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:27 run_atlas
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:27 job.xml
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:27 start_atlas.sh
[2025-10-11 15:12:43] drwxrwx--x 2 boinc boinc      4096 Oct 11 14:27 shared
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc    565601 Oct 11 14:27 input.tar.gz
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc      9396 Oct 11 14:27 init_data.xml
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc 213124403 Oct 11 14:27 EVNT.46376901._001382.pool.root.1
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:27 boinc_setup_complete
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:27 boinc_lockfile
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc      2518 Oct 11 14:27 pandaJob.out
[2025-10-11 15:12:43] -rw------- 1 boinc boinc    975536 Oct 11 14:27 agis_schedconf.cvmfs.json
[2025-10-11 15:12:43] -rw------- 1 boinc boinc   1560580 Oct 11 14:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:12:43] drwx------ 4 boinc boinc      4096 Oct 11 14:27 pilot3
[2025-10-11 15:12:43] -rw------- 1 boinc boinc 178141003 Oct 11 15:11 HITS.46376905._040391.pool.root.1
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc       529 Oct 11 15:11 boinc_task_state.xml
[2025-10-11 15:12:43] -rw------- 1 boinc boinc      1025 Oct 11 15:11 memory_monitor_summary.json
[2025-10-11 15:12:43] -rw------- 1 boinc boinc    359058 Oct 11 15:11 log.46376905._040391.job.log.tgz.1
[2025-10-11 15:12:43] -rw------- 1 boinc boinc      7740 Oct 11 15:11 heartbeat.json
[2025-10-11 15:12:43] -rw------- 1 boinc boinc        95 Oct 11 15:12 pilot_heartbeat.json
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:12 boinc_mmap_file
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:12 wrapper_checkpoint.txt
[2025-10-11 15:12:43] -rw------- 1 boinc boinc      5013 Oct 11 15:12 pilotlog.txt
[2025-10-11 15:12:43] -rw------- 1 boinc boinc    401804 Oct 11 15:12 log.46376905._040391.job.log.1
[2025-10-11 15:12:43] -rw------- 1 boinc boinc       357 Oct 11 15:12 output.list
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:12 runtime_log
[2025-10-11 15:12:43] -rw------- 1 boinc boinc    778240 Oct 11 15:12 result.tar.gz
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc      8672 Oct 11 15:12 runtime_log.err
[2025-10-11 15:12:43] -rw------- 1 boinc boinc       642 Oct 11 15:12 kCRKDm6msO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXhHNDm4xeI5n.diag
[2025-10-11 15:12:43] -rw-r--r-- 1 boinc boinc     21860 Oct 11 15:12 stderr.txt
[2025-10-11 15:12:43] HITS file was successfully produced:
[2025-10-11 15:12:43] -rw------- 1 boinc boinc 178141003 Oct 11 15:11 shared/HITS.pool.root.1
[2025-10-11 15:12:43]  *** Contents of shared directory: ***
[2025-10-11 15:12:43] total 383440
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:27 start_atlas.sh
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc    565601 Oct 11 14:27 input.tar.gz
[2025-10-11 15:12:43] -rw-r--r-- 2 boinc boinc 213124403 Oct 11 14:27 ATLAS.root_0
[2025-10-11 15:12:43] -rw------- 1 boinc boinc 178141003 Oct 11 15:11 HITS.pool.root.1
[2025-10-11 15:12:43] -rw------- 1 boinc boinc    778240 Oct 11 15:12 result.tar.gz
15:12:44 (1255463): run_atlas exited; CPU time 27570.007342
15:12:44 (1255463): called boinc_finish(0)

</stderr_txt>
]]>

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