Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:16 (682916): wrapper (7.7.26015): starting
10:01:16 (682916): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 10:01:16] Arguments: --nthreads 12
[2025-10-11 10:01:16] Threads: 12
[2025-10-11 10:01:16] Checking for CVMFS
[2025-10-11 10:01:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:01:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:01:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:01:16] 2.13.2.0 135553 2846 123316 151585 3 375 31182283 32503808 7104 16776704 0 47031535 99.970 3050708 51217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 10:01:16] CVMFS is ok
[2025-10-11 10:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:01:16] Further information can be found at the LHC@home message board.
[2025-10-11 10:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:01:16] Checking for apptainer binary...
[2025-10-11 10:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:01:16] Running /usr/bin/apptainer --version
[2025-10-11 10:01:16] apptainer version 1.4.3-1.el9
[2025-10-11 10:01:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:01:16] c8-7-2.aglt2.org
[2025-10-11 10:01:16] apptainer works
[2025-10-11 10:01:16] Set ATHENA_PROC_NUMBER=12
[2025-10-11 10:01:16] Set ATHENA_CORE_NUMBER=12
[2025-10-11 10:01:16] Starting ATLAS job with PandaID=6837331830
[2025-10-11 10:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:31:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:31:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 10:31:36]  replicas=None
[2025-10-11 10:31:36]  scope=mc23_13p6TeV
[2025-10-11 10:31:36]  status=None
[2025-10-11 10:31:36]  status_code=0
[2025-10-11 10:31:36]  storage_token=
[2025-10-11 10:31:36]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6837331830/log.46676269._015124.job.log.tgz.1
[2025-10-11 10:31:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/4f/log.46676269._015124.job.log.tgz.1
[2025-10-11 10:31:36]  workdir=None
[2025-10-11 10:31:36] ]
[2025-10-11 10:31:36] 2025-10-11 14:30:46,600 | INFO     | transferring file log.46676269._015124.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6837331830/log.46676269._015124.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 10:31:36] 2025-10-11 14:30:46,600 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6837331830/log.46676269._015124.job.log.tgz.1 /tmp/boinchome/slots/5/log.46676269._015124.job
[2025-10-11 10:31:36] 2025-10-11 14:30:46,618 | INFO     | adding to output.list: log.46676269._015124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/4f/log.46676269._015124.job.log.tg
[2025-10-11 10:31:36] 2025-10-11 14:30:46,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 10:31:36] 2025-10-11 14:30:46,618 | INFO     | summary of transferred files:
[2025-10-11 10:31:36] 2025-10-11 14:30:46,619 | INFO     |  -- lfn=log.46676269._015124.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 10:31:36] 2025-10-11 14:30:46,619 | INFO     | stage-out finished correctly
[2025-10-11 10:31:36] 2025-10-11 14:30:46,672 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 10:31:36] 2025-10-11 14:30:47,611 | INFO     | PID=686644 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:31:36] 2025-10-11 14:30:47,611 | INFO     | .. there are 11 such processes running
[2025-10-11 10:31:36] 2025-10-11 14:30:48,019 | INFO     | monitor loop #134: job 0:6837331830 is in state 'finished'
[2025-10-11 10:31:36] 2025-10-11 14:30:48,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:31:36] 2025-10-11 14:30:48,249 | INFO     | job 6837331830 has state=finished
[2025-10-11 10:31:36] 2025-10-11 14:30:48,250 | INFO     | preparing for final server update for job 6837331830 in state='finished'
[2025-10-11 10:31:36] 2025-10-11 14:30:48,250 | INFO     | this job has now completed (state=finished)
[2025-10-11 10:31:36] 2025-10-11 14:30:48,250 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 10:31:36] 2025-10-11 14:30:48,250 | INFO     | log transfer has been attempted: DONE
[2025-10-11 10:31:36] 2025-10-11 14:30:48,250 | INFO     | job 6837331830 has finished - writing final server update
[2025-10-11 10:31:36] 2025-10-11 14:30:48,251 | INFO     | total number of processed events: 400 (read)
[2025-10-11 10:31:36] 2025-10-11 14:30:48,251 | INFO     | executing command: lscpu
[2025-10-11 10:31:36] 2025-10-11 14:30:48,315 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 10:31:36] 2025-10-11 14:30:48,611 | INFO     | time since job start (1761s) is within the limit (172800.0s)
[2025-10-11 10:31:36] 2025-10-11 14:30:50,522 | INFO     | monitor loop #135: job 0:6837331830 is in state 'finished'
[2025-10-11 10:31:36] 2025-10-11 14:30:50,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:31:36] 2025-10-11 14:30:50,617 | INFO     | time since job start (1763s) is within the limit (172800.0s)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,381 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 10:31:36] 2025-10-11 14:30:51,398 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3576.7064999999966
[2025-10-11 10:31:36] 2025-10-11 14:30:51,411 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6837331830/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,412 | INFO     | extracted standard info from prmon json
[2025-10-11 10:31:36] 2025-10-11 14:30:51,412 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:31:36] 2025-10-11 14:30:51,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:31:36] 2025-10-11 14:30:51,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:31:36] 2025-10-11 14:30:51,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:31:36] 2025-10-11 14:30:51,413 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:31:36] 2025-10-11 14:30:51,413 | INFO     | sum of square deviations: 3294945.5
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | sum of deviations: 96919087.49999999
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | mean x: 1760192256.5
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | mean y: 2361591.6818181816
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | -- intersect: -51772767109.095146
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | intersect: -51772767109.095146
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | chi2: 0.00035328545603002326
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | -- intersect: -51772767109.095146
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | current memory leak: 29.41 B/s (using 22 data points, chi2=0.00)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | could have reported an average CPU frequency of 3581 MHz (4 samples)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | ..............................
[2025-10-11 10:31:36] 2025-10-11 14:30:51,414 | INFO     | . Timing measurements:
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . get job = 0 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . initial setup = 3 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . payload setup = 4 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . stage-in = 0 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . payload execution = 1735 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . stage-out = 0 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | . log creation = 0 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,415 | INFO     | ..............................
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | 
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | job summary report
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | --------------------------------------------------
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | PanDA job id: 6837331830
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | task id: 46676269
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | errors: (none)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | pilot state: finished 
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | transexitcode: 0
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | exeerrorcode: 0
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | exeerrordiag: 
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | exitcode: 0
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | exitmsg: OK
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | cpuconsumptiontime: 18503 s
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | nevents: 400
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | neventsw: 0
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | pid: 698450
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | pgrp: 698450
[2025-10-11 10:31:36] 2025-10-11 14:30:51,658 | INFO     | corecount: 12
[2025-10-11 10:31:36] 2025-10-11 14:30:51,659 | INFO     | event service: False
[2025-10-11 10:31:36] 2025-10-11 14:30:51,659 | INFO     | sizes: {0: 2348855, 4: 2349117, 11: 2349145, 1744: 2374039, 1745: 2383093, 1750: 2383231}
[2025-10-11 10:31:36] 2025-10-11 14:30:51,659 | INFO     | --------------------------------------------------
[2025-10-11 10:31:36] 2025-10-11 14:30:51,659 | INFO     | 
[2025-10-11 10:31:36] 2025-10-11 14:30:51,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:31:36] 2025-10-11 14:30:51,676 | INFO     | job 6837331830 has completed (purged errors)
[2025-10-11 10:31:36] 2025-10-11 14:30:51,676 | INFO     | overall cleanup function is called
[2025-10-11 10:31:36] 2025-10-11 14:30:52,682 | INFO     | --- collectZombieJob: --- 10, [698450]
[2025-10-11 10:31:36] 2025-10-11 14:30:52,683 | INFO     | zombie collector waiting for pid 698450
[2025-10-11 10:31:36] 2025-10-11 14:30:52,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:31:36] 2025-10-11 14:30:52,683 | INFO     | collected zombie processes
[2025-10-11 10:31:36] 2025-10-11 14:30:52,683 | INFO     | will attempt to kill all subprocesses of pid=698450
[2025-10-11 10:31:36] 2025-10-11 14:30:53,045 | INFO     | process IDs to be killed: [698450] (in reverse order)
[2025-10-11 10:31:36] 2025-10-11 14:30:53,173 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:31:36] 2025-10-11 14:30:53,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:31:36] 2025-10-11 14:30:53,192 | INFO     | did not find any defunct processes belonging to 698450
[2025-10-11 10:31:36] 2025-10-11 14:30:53,208 | INFO     | did not find any defunct processes belonging to 698450
[2025-10-11 10:31:36] 2025-10-11 14:30:53,208 | INFO     | ready for new job
[2025-10-11 10:31:36] 2025-10-11 14:30:53,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:31:36] 2025-10-11 14:30:53,210 | INFO     | ***************************************
[2025-10-11 10:31:36] 2025-10-11 14:30:53,210 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:31:36] 2025-10-11 14:30:53,210 | INFO     | ***************************************
[2025-10-11 10:31:36] 2025-10-11 14:30:53,210 | INFO     | 
[2025-10-11 10:31:36] 2025-10-11 14:30:53,226 | INFO     | architecture information:
[2025-10-11 10:31:36] 2025-10-11 14:30:53,226 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:31:36] 2025-10-11 14:30:53,241 | INFO     | cat /etc/os-release:
[2025-10-11 10:31:36] NAME="CentOS Linux"
[2025-10-11 10:31:36] VERSION="7 (Core)"
[2025-10-11 10:31:36] ID="centos"
[2025-10-11 10:31:36] ID_LIKE="rhel fedora"
[2025-10-11 10:31:36] VERSION_ID="7"
[2025-10-11 10:31:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:31:36] ANSI_COLOR="0;31"
[2025-10-11 10:31:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:31:36] HOME_URL="https://www.centos.org/"
[2025-10-11 10:31:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:31:36] 
[2025-10-11 10:31:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:31:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:31:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:31:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:31:36] 
[2025-10-11 10:31:36] 2025-10-11 14:30:53,241 | INFO     | ***************************************
[2025-10-11 10:31:36] 2025-10-11 14:30:53,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-11 10:31:36] 2025-10-11 14:30:53,756 | INFO     | sufficient remaining disk space (90957676544 B)
[2025-10-11 10:31:36] 2025-10-11 14:30:53,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:31:36] 2025-10-11 14:30:53,757 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:31:36] 2025-10-11 14:30:53,757 | INFO     | update_server=False
[2025-10-11 10:31:36] 2025-10-11 14:30:53,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:31:36] 2025-10-11 14:30:53,773 | INFO     | all job control threads have been joined
[2025-10-11 10:31:36] 2025-10-11 14:30:54,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:31:36] 2025-10-11 14:30:54,031 | INFO     | aborting loop
[2025-10-11 10:31:36] 2025-10-11 14:30:54,120 | INFO     | all data control threads have been joined
[2025-10-11 10:31:36] 2025-10-11 14:30:54,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:31:36] 2025-10-11 14:30:54,762 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:54,779 | INFO     | [job] control thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:54,923 | INFO     | all payload control threads have been joined
[2025-10-11 10:31:36] 2025-10-11 14:30:55,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,036 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,126 | INFO     | [data] control thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,154 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,399 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,726 | INFO     | [job] validate thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,880 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,929 | INFO     | [payload] control thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:55,960 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:56,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:56,266 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:56,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:31:36] 2025-10-11 14:30:56,688 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:30:57,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:31:36] 2025-10-11 14:30:57,488 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:31:01,242 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:31:36] 2025-10-11 14:31:23,381 [wrapper] supervise_pilot (15 min periods counter: 3)
[2025-10-11 10:31:36] 2025-10-11 14:31:24,039 | INFO     | PID=686644 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 10:31:36] 2025-10-11 14:31:24,039 | INFO     | .. there are 11 such processes running
[2025-10-11 10:31:36] 2025-10-11 14:31:24,039 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:31:36] 2025-10-11 14:31:24,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:31:36] 2025-10-11 14:31:24,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:31:36] 2025-10-11 14:31:29,556 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:31:36] 2025-10-11 14:31:31,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510979712832)>', '<ExcThread(monitor, started 140510618429184)>']
[2025-10-11 10:31:36] 2025-10-11 14:31:31,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:31:36] 2025-10-11 14:31:31,073 | INFO     | [monitor] control thread has ended
[2025-10-11 10:31:36] 2025-10-11 14:31:36,040 | INFO     | all workflow threads have been joined
[2025-10-11 10:31:36] 2025-10-11 14:31:36,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:31:36] 2025-10-11 14:31:36,041 | INFO     | traces error code: 0
[2025-10-11 10:31:36] 2025-10-11 14:31:36,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:31:36] 2025-10-11 14:31:36,115 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:31:36] 2025-10-11 14:31:36,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:31:36] 2025-10-11 14:31:36,119 [wrapper] pilotpid: 686644
[2025-10-11 10:31:36] 2025-10-11 14:31:36,121 [wrapper] Pilot exit status: 0
[2025-10-11 10:31:36] 2025-10-11 14:31:36,128 [wrapper] pandaids: 6837331830
[2025-10-11 10:31:36] 2025-10-11 14:31:36,199 [wrapper] cleanup supervisor_pilot  894655 686645
[2025-10-11 10:31:36] 2025-10-11 14:31:36,201 [wrapper] Test setup, not cleaning
[2025-10-11 10:31:36] 2025-10-11 14:31:36,203 [wrapper] apfmon messages muted
[2025-10-11 10:31:36] 2025-10-11 14:31:36,205 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:31:36] 2025-10-11 14:31:36,207 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:31:36]  *** Error codes and diagnostics ***
[2025-10-11 10:31:36]     "exeErrorCode": 0,
[2025-10-11 10:31:36]     "exeErrorDiag": "",
[2025-10-11 10:31:36]     "pilotErrorCode": 0,
[2025-10-11 10:31:36]     "pilotErrorDiag": "",
[2025-10-11 10:31:36]  *** Listing of results directory ***
[2025-10-11 10:31:36] total 413984
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:51 queuedata.json
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:52 pilot3.tar.gz
[2025-10-11 10:31:36] -rwx------. 1 boincer umatlas     36292 Oct  9 07:01 runpilot2-wrapper.sh
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:31:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:01 run_atlas
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:01 job.xml
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas 220701008 Oct 11 10:01 EVNT.46676267._000621.pool.root.1
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:01 start_atlas.sh
[2025-10-11 10:31:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:01 shared
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 10:01 input.tar.gz
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:01 boinc_lockfile
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 10:01 pandaJob.out
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas    975520 Oct 11 10:01 agis_schedconf.cvmfs.json
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:01 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:31:36] drwx------. 5 boincer umatlas      4096 Oct 11 10:01 pilot3
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 10:27 init_data.xml
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas 198020866 Oct 11 10:30 HITS.46676269._015124.pool.root.1
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas       529 Oct 11 10:30 boinc_task_state.xml
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas      1030 Oct 11 10:30 memory_monitor_summary.json
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas    354986 Oct 11 10:30 log.46676269._015124.job.log.tgz.1
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas      7773 Oct 11 10:30 heartbeat.json
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas        95 Oct 11 10:31 pilot_heartbeat.json
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 10:31 boinc_mmap_file
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas      4823 Oct 11 10:31 pilotlog.txt
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas        27 Oct 11 10:31 wrapper_checkpoint.txt
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas    290086 Oct 11 10:31 log.46676269._015124.job.log.1
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas       357 Oct 11 10:31 output.list
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas       620 Oct 11 10:31 runtime_log
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas    665600 Oct 11 10:31 result.tar.gz
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas       648 Oct 11 10:31 SRQNDmVZ3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkhNMDmPciOYn.diag
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 10:31 runtime_log.err
[2025-10-11 10:31:36] -rw-r--r--. 1 boincer umatlas     21909 Oct 11 10:31 stderr.txt
[2025-10-11 10:31:36] HITS file was successfully produced:
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas 198020866 Oct 11 10:30 shared/HITS.pool.root.1
[2025-10-11 10:31:36]  *** Contents of shared directory: ***
[2025-10-11 10:31:36] total 410148
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas 220701008 Oct 11 10:01 ATLAS.root_0
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:01 start_atlas.sh
[2025-10-11 10:31:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 10:01 input.tar.gz
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas 198020866 Oct 11 10:30 HITS.pool.root.1
[2025-10-11 10:31:36] -rw-------. 1 boincer umatlas    665600 Oct 11 10:31 result.tar.gz
10:31:38 (682916): run_atlas exited; CPU time 18547.272006
10:31:38 (682916): called boinc_finish(0)

</stderr_txt>
]]>

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