Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:49:57 (2016631): wrapper (7.7.26015): starting
23:49:57 (2016631): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 23:49:57] Arguments: --nthreads 4
[2025-10-12 23:49:57] Threads: 4
[2025-10-12 23:49:57] Checking for CVMFS
[2025-10-12 23:49:57] No cvmfs_config command found, will try listing directly
[2025-10-12 23:49:57] CVMFS is ok
[2025-10-12 23:49:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:49:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:49:57] Further information can be found at the LHC@home message board.
[2025-10-12 23:49:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:49:57] Checking for apptainer binary...
[2025-10-12 23:49:57] which: no apptainer in ((null))
[2025-10-12 23:49:57] apptainer is not installed, using version from CVMFS
[2025-10-12 23:49:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:49:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-12 23:49:57] apptainer works
[2025-10-12 23:49:57] Set ATHENA_PROC_NUMBER=4
[2025-10-12 23:49:57] Set ATHENA_CORE_NUMBER=4
[2025-10-12 23:49:57] Starting ATLAS job with PandaID=6838229522
[2025-10-12 23:49:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:20:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:20:04] 2025-10-13 00:27:53,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:20:04] 2025-10-13 00:27:53,806 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:20:04] 2025-10-13 00:27:53,806 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,807 | INFO     | sum of deviations: 8135063639.000004
[2025-10-13 03:20:04] 2025-10-13 00:27:53,807 | INFO     | mean x: 1760310541.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,807 | INFO     | mean y: 2294955.4
[2025-10-13 03:20:04] 2025-10-13 00:27:53,807 | INFO     | -- intersect: -12399792883.53892
[2025-10-13 03:20:04] 2025-10-13 00:27:53,807 | INFO     | intersect: -12399792883.53892
[2025-10-13 03:20:04] 2025-10-13 00:27:53,808 | INFO     | chi2: 1.9351319778500917
[2025-10-13 03:20:04] 2025-10-13 00:27:53,808 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | sum of deviations: 17233997367.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | mean x: 1760310388.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | mean y: 2307424.013333333
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | -- intersect: -28987302757.006382
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | intersect: -28987302757.006382
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | chi2: 1.1309272853734964
[2025-10-13 03:20:04] 2025-10-13 00:27:53,809 | INFO     | current chi2=1.1309272853734964 (change=41.55813152186431 %)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,810 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,810 | INFO     | sum of deviations: 16493461210.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | mean x: 1760310236.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | mean y: 2306308.1586206895
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | -- intersect: -30711896220.929863
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | intersect: -30711896220.929863
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | chi2: 1.13184679869812
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | current chi2=1.13184679869812 (change=-0.08130614023693956 %)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,811 | INFO     | right removable region: 144
[2025-10-13 03:20:04] 2025-10-13 00:27:53,812 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,812 | INFO     | sum of deviations: -8433849111.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | mean x: 1760310693.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | mean y: 2317902.7933333335
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | -- intersect: 14189046334.022772
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | intersect: 14189046334.022772
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | chi2: 0.8279310188740184
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | current chi2=0.8279310188740184 (change=57.21578536499409 %)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,813 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,814 | INFO     | sum of deviations: -8147624271.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,814 | INFO     | mean x: 1760310846.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,814 | INFO     | mean y: 2317466.3379310346
[2025-10-13 03:20:04] 2025-10-13 00:27:53,815 | INFO     | -- intersect: 15174867698.36599
[2025-10-13 03:20:04] 2025-10-13 00:27:53,815 | INFO     | intersect: 15174867698.36599
[2025-10-13 03:20:04] 2025-10-13 00:27:53,815 | INFO     | chi2: 0.8284599260569213
[2025-10-13 03:20:04] 2025-10-13 00:27:53,815 | INFO     | current chi2=0.8284599260569213 (change=-0.06388300122179179 %)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,815 | INFO     | left removable region: 20
[2025-10-13 03:20:04] 2025-10-13 00:27:53,816 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,816 | INFO     | sum of deviations: 1046883494.4999999
[2025-10-13 03:20:04] 2025-10-13 00:27:53,816 | INFO     | mean x: 1760310815.5
[2025-10-13 03:20:04] 2025-10-13 00:27:53,816 | INFO     | mean y: 2330605.040322581
[2025-10-13 03:20:04] 2025-10-13 00:27:53,816 | INFO     | -- intersect: -3114925444.0988317
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | intersect: -3114925444.0988317
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | chi2: 0.0002903570524191421
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | -- intersect: -3114925444.0988317
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | current memory leak: 1.77 B/s (using 124 data points, chi2=0.00)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | could have reported an average CPU frequency of 2755 MHz (9 samples)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,817 | INFO     | ..............................
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . Timing measurements:
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . get job = 0 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . initial setup = 1 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . payload setup = 8 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . stage-in = 0 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . payload execution = 9423 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . stage-out = 0 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | . log creation = 0 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,818 | INFO     | ..............................
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | 
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | job summary report
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | --------------------------------------------------
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | PanDA job id: 6838229522
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | task id: 46676269
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | errors: (none)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:20:04] 2025-10-13 00:27:53,912 | INFO     | pilot state: finished 
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | transexitcode: 0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | exeerrorcode: 0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | exeerrordiag: 
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | exitcode: 0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | exitmsg: OK
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | cpuconsumptiontime: 36171 s
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | nevents: 400
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | neventsw: 0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | pid: 2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | pgrp: 2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | corecount: 4
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | event service: False
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | sizes: {0: 2348698, 1: 2348897, 7: 2349159, 11: 2349187, 9435: 2378055, 9437: 2387077, 9439: 2387261, 9445: 2387519}
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | --------------------------------------------------
[2025-10-13 03:20:04] 2025-10-13 00:27:53,913 | INFO     | 
[2025-10-13 03:20:04] 2025-10-13 00:27:53,914 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 03:20:04] 2025-10-13 00:27:53,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | job 6838229522 has completed (purged errors)
[2025-10-13 03:20:04] 2025-10-13 00:27:53,948 | INFO     | overall cleanup function is called
[2025-10-13 03:20:04] 2025-10-13 00:27:54,958 | INFO     | --- collectZombieJob: --- 10, [2107595]
[2025-10-13 03:20:04] 2025-10-13 00:27:54,958 | INFO     | zombie collector waiting for pid 2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:54,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:20:04] 2025-10-13 00:27:54,958 | INFO     | collected zombie processes
[2025-10-13 03:20:04] 2025-10-13 00:27:54,958 | INFO     | will attempt to kill all subprocesses of pid=2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:55,639 | INFO     | process IDs to be killed: [2107595] (in reverse order)
[2025-10-13 03:20:04] 2025-10-13 00:27:55,866 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:20:04] 2025-10-13 00:27:55,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:20:04] 2025-10-13 00:27:55,895 | INFO     | did not find any defunct processes belonging to 2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:55,922 | INFO     | did not find any defunct processes belonging to 2107595
[2025-10-13 03:20:04] 2025-10-13 00:27:55,922 | INFO     | ready for new job
[2025-10-13 03:20:04] 2025-10-13 00:27:55,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:20:04] 2025-10-13 00:27:55,924 | INFO     | ***************************************
[2025-10-13 03:20:04] 2025-10-13 00:27:55,925 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:20:04] 2025-10-13 00:27:55,925 | INFO     | ***************************************
[2025-10-13 03:20:04] 2025-10-13 00:27:55,925 | INFO     | 
[2025-10-13 03:20:04] 2025-10-13 00:27:55,931 | INFO     | architecture information:
[2025-10-13 03:20:04] 2025-10-13 00:27:55,931 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:20:04] 2025-10-13 00:27:55,945 | INFO     | cat /etc/os-release:
[2025-10-13 03:20:04] NAME="CentOS Linux"
[2025-10-13 03:20:04] VERSION="7 (Core)"
[2025-10-13 03:20:04] ID="centos"
[2025-10-13 03:20:04] ID_LIKE="rhel fedora"
[2025-10-13 03:20:04] VERSION_ID="7"
[2025-10-13 03:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:20:04] ANSI_COLOR="0;31"
[2025-10-13 03:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:20:04] HOME_URL="https://www.centos.org/"
[2025-10-13 03:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:20:04] 
[2025-10-13 03:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:20:04] 
[2025-10-13 03:20:04] 2025-10-13 00:27:55,945 | INFO     | ***************************************
[2025-10-13 03:20:04] 2025-10-13 00:27:56,448 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 03:20:04] 2025-10-13 00:27:56,471 | INFO     | sufficient remaining disk space (3334356336640 B)
[2025-10-13 03:20:04] 2025-10-13 00:27:56,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:20:04] 2025-10-13 00:27:56,471 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:20:04] 2025-10-13 00:27:56,471 | INFO     | update_server=False
[2025-10-13 03:20:04] 2025-10-13 00:27:56,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:20:04] 2025-10-13 00:27:56,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:20:04] 2025-10-13 00:27:56,958 | INFO     | all payload control threads have been joined
[2025-10-13 03:20:04] 2025-10-13 00:27:57,006 | INFO     | all data control threads have been joined
[2025-10-13 03:20:04] 2025-10-13 00:27:57,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:20:04] 2025-10-13 00:27:57,146 | INFO     | aborting loop
[2025-10-13 03:20:04] 2025-10-13 00:27:57,336 | INFO     | all job control threads have been joined
[2025-10-13 03:20:04] 2025-10-13 00:27:57,477 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:57,544 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:57,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:20:04] 2025-10-13 00:27:57,914 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:57,964 | INFO     | [payload] control thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,012 | INFO     | [data] control thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,151 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,342 | INFO     | [job] control thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,473 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,514 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,639 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,693 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,819 | INFO     | [job] validate thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,852 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:27:58,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:20:04] 2025-10-13 00:27:59,927 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:28:01,884 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:28:06,760 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:20:04] 2025-10-13 00:28:07,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:20:04] 2025-10-13 00:28:25,404 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:20:04] 2025-10-13 00:28:25,688 | INFO     | 9466s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 03:20:04] 2025-10-13 00:28:27,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23214648055616)>', '<ExcThread(monitor, started 23214411450112)>']
[2025-10-13 03:20:04] 2025-10-13 00:28:27,499 | INFO     | PID=2042699 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:20:04] 2025-10-13 00:28:27,499 | INFO     | .. there are 5 such processes running
[2025-10-13 03:20:04] 2025-10-13 00:28:27,499 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:20:04] 2025-10-13 00:28:27,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:20:04] 2025-10-13 00:28:27,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:20:04] 2025-10-13 00:28:27,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:20:04] 2025-10-13 00:28:27,500 | INFO     | [monitor] control thread has ended
[2025-10-13 03:20:04] 2025-10-13 00:28:32,077 | INFO     | all workflow threads have been joined
[2025-10-13 03:20:04] 2025-10-13 00:28:32,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:20:04] 2025-10-13 00:28:32,078 | INFO     | traces error code: 0
[2025-10-13 03:20:04] 2025-10-13 00:28:32,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:20:04] 2025-10-13 00:28:32,259 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:20:04] 2025-10-13 00:28:32,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:20:04] 2025-10-13 00:28:32,267 [wrapper] pilotpid: 2042699
[2025-10-13 03:20:04] 2025-10-13 00:28:32,270 [wrapper] Pilot exit status: 0
[2025-10-13 03:20:04] 2025-10-13 00:28:32,282 [wrapper] pandaids: 6838229522
[2025-10-13 03:20:04] 2025-10-13 00:28:32,395 [wrapper] cleanup supervisor_pilot 2355072 2042700
[2025-10-13 03:20:04] 2025-10-13 00:28:32,399 [wrapper] Test setup, not cleaning
[2025-10-13 03:20:04] 2025-10-13 00:28:32,402 [wrapper] apfmon messages muted
[2025-10-13 03:20:04] 2025-10-13 00:28:32,406 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:20:04] 2025-10-13 00:28:32,409 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:20:04]  *** Error codes and diagnostics ***
[2025-10-13 03:20:04]     "exeErrorCode": 0,
[2025-10-13 03:20:04]     "exeErrorDiag": "",
[2025-10-13 03:20:04]     "pilotErrorCode": 0,
[2025-10-13 03:20:04]     "pilotErrorDiag": "",
[2025-10-13 03:20:04]  *** Listing of results directory ***
[2025-10-13 03:20:04] total 419288
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 09:58 pilot3.tar.gz
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:22 queuedata.json
[2025-10-13 03:20:04] -rwx------ 1 boinc boinc     36292 Oct 11 10:22 runpilot2-wrapper.sh
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:20:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:49 run_atlas
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:49 job.xml
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc      6687 Oct 12 23:49 init_data.xml
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc 222988812 Oct 12 23:49 EVNT.46676267._002177.pool.root.1
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:49 start_atlas.sh
[2025-10-13 03:20:04] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:49 shared
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:49 input.tar.gz
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:49 boinc_lockfile
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:49 pandaJob.out
[2025-10-13 03:20:04] -rw------- 1 boinc boinc    975528 Oct 12 23:50 agis_schedconf.cvmfs.json
[2025-10-13 03:20:04] -rw------- 1 boinc boinc   1560580 Oct 12 23:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:20:04] drwx------ 5 boinc boinc      4096 Oct 12 23:50 pilot3
[2025-10-13 03:20:04] -rw------- 1 boinc boinc 199110279 Oct 13 02:27 HITS.46676269._054271.pool.root.1
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc       528 Oct 13 02:27 boinc_task_state.xml
[2025-10-13 03:20:04] -rw------- 1 boinc boinc        95 Oct 13 02:27 pilot_heartbeat.json
[2025-10-13 03:20:04] -rw------- 1 boinc boinc      1026 Oct 13 02:27 memory_monitor_summary.json
[2025-10-13 03:20:04] -rw------- 1 boinc boinc    340377 Oct 13 02:27 log.46676269._054271.job.log.tgz.1
[2025-10-13 03:20:04] -rw------- 1 boinc boinc      7781 Oct 13 02:27 heartbeat.json
[2025-10-13 03:20:04] -rw------- 1 boinc boinc      5022 Oct 13 02:28 pilotlog.txt
[2025-10-13 03:20:04] -rw------- 1 boinc boinc   1334641 Oct 13 02:28 log.46676269._054271.job.log.1
[2025-10-13 03:20:04] -rw------- 1 boinc boinc       357 Oct 13 02:28 output.list
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:28 runtime_log
[2025-10-13 03:20:04] -rw------- 1 boinc boinc   1689600 Oct 13 02:28 result.tar.gz
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc      9084 Oct 13 02:28 runtime_log.err
[2025-10-13 03:20:04] -rw------- 1 boinc boinc       662 Oct 13 02:28 QY1LDmM3jR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRYRMDmYAHB3m.diag
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc        26 Oct 13 03:19 wrapper_checkpoint.txt
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:20 boinc_mmap_file
[2025-10-13 03:20:04] -rw-r--r-- 1 boinc boinc     20696 Oct 13 03:20 stderr.txt
[2025-10-13 03:20:04] HITS file was successfully produced:
[2025-10-13 03:20:04] -rw------- 1 boinc boinc 199110279 Oct 13 02:27 shared/HITS.pool.root.1
[2025-10-13 03:20:04]  *** Contents of shared directory: ***
[2025-10-13 03:20:04] total 414444
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc 222988812 Oct 12 23:49 ATLAS.root_0
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:49 start_atlas.sh
[2025-10-13 03:20:04] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:49 input.tar.gz
[2025-10-13 03:20:04] -rw------- 1 boinc boinc 199110279 Oct 13 02:27 HITS.pool.root.1
[2025-10-13 03:20:04] -rw------- 1 boinc boinc   1689600 Oct 13 02:28 result.tar.gz
03:20:05 (2016631): run_atlas exited; CPU time 36772.948525
03:20:05 (2016631): called boinc_finish(0)

</stderr_txt>
]]>

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